RNA–Protein interactions for RNA: ENST00000420401.5

ECHDC3-202, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 2

Gene ECHDC3, Length 854 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-202ENST00000420401 NISCHQ9Y2I1 1504 aa43.95■■■■■ 4.63
ECHDC3-202ENST00000420401 ABCC9O60706 1549 aa39.77■■■■□ 3.96
ECHDC3-202ENST00000420401 CCDC180Q9P1Z9 1646 aa39.3■■■■□ 3.88
ECHDC3-202ENST00000420401 DNAJC5BQ9UF47 199 aa37.68■■■■□ 3.62
ECHDC3-202ENST00000420401 RB1CC1Q8TDY2 1594 aa37.66■■■■□ 3.62
ECHDC3-202ENST00000420401 NACADO15069 1562 aa37.25■■■■□ 3.55
ECHDC3-202ENST00000420401 DCAF8L2P0C7V8 631 aa37.09■■■■□ 3.53
ECHDC3-202ENST00000420401 PABPN1Q86U42 306 aaKnown RBP eCLIP36.96■■■■□ 3.51
ECHDC3-202ENST00000420401 UNC13AQ9UPW8 1703 aa36.84■■■■□ 3.49
ECHDC3-202ENST00000420401 ZCCHC6Q5VYS8 1495 aaKnown RBP36.59■■■■□ 3.45
ECHDC3-202ENST00000420401 MYO15BQ96JP2 1530 aa36.53■■■■□ 3.44
ECHDC3-202ENST00000420401 BICRAQ9NZM4 1560 aa36.51■■■■□ 3.44
ECHDC3-202ENST00000420401 DCAF1Q9Y4B6 1507 aa36.38■■■■□ 3.41
ECHDC3-202ENST00000420401 SHROOM4Q9ULL8 1493 aa35.97■■■■□ 3.35
ECHDC3-202ENST00000420401 CC2D2AQ9P2K1 1620 aa35.9■■■■□ 3.34
ECHDC3-202ENST00000420401 CECR2Q9BXF3 1484 aa35.87■■■■□ 3.33
ECHDC3-202ENST00000420401 SCRIBQ14160 1630 aa35.79■■■■□ 3.32
ECHDC3-202ENST00000420401 EIF4G1Q04637 1599 aaKnown RBP35.69■■■■□ 3.3
ECHDC3-202ENST00000420401 DNAJC5Q9H3Z4 198 aa35.01■■■■□ 3.2
ECHDC3-202ENST00000420401 CUX2O14529 1486 aa34.46■■■■□ 3.11
ECHDC3-202ENST00000420401 ERCC6Q03468 1493 aa34.42■■■■□ 3.1
ECHDC3-202ENST00000420401 NCAPD3P42695 1498 aa34.36■■■■□ 3.09
ECHDC3-202ENST00000420401 ATAD2BQ9ULI0 1458 aa34.2■■■■□ 3.06
ECHDC3-202ENST00000420401 SMARCA2P51531 1590 aa34.11■■■■□ 3.05
ECHDC3-202ENST00000420401 HMGXB3Q12766 1538 aa34.08■■■■□ 3.05
ECHDC3-202ENST00000420401 BAZ1AQ9NRL2 1556 aaPredicted RBP34.07■■■■□ 3.05
ECHDC3-202ENST00000420401 SMARCA4P51532 1647 aa34.07■■■■□ 3.04
ECHDC3-202ENST00000420401 NESP48681 1621 aa34.01■■■■□ 3.03
ECHDC3-202ENST00000420401 BAZ1BQ9UIG0 1483 aaKnown RBP33.88■■■■□ 3.01
ECHDC3-202ENST00000420401 MROH2BQ7Z745 1585 aa33.85■■■■□ 3.01
ECHDC3-202ENST00000420401 THOC2Q8NI27 1593 aaKnown RBP33.75■■■□□ 2.99
ECHDC3-202ENST00000420401 PEG3Q9GZU2 1588 aa33.74■■■□□ 2.99
ECHDC3-202ENST00000420401 LAMC3Q9Y6N6 1575 aa33.72■■■□□ 2.99
ECHDC3-202ENST00000420401 KIF21AQ7Z4S6 1674 aa33.61■■■□□ 2.97
ECHDC3-202ENST00000420401 PDS5BQ9NTI5 1447 aa33.55■■■□□ 2.96
ECHDC3-202ENST00000420401 RSF1Q96T23 1441 aaPredicted RBP33.51■■■□□ 2.95
ECHDC3-202ENST00000420401 WIZO95785 1651 aa33.46■■■□□ 2.95
ECHDC3-202ENST00000420401 TRIM41Q8WV44 630 aa33.36■■■□□ 2.93
ECHDC3-202ENST00000420401 CADPSQ9ULU8 1353 aa33.32■■■□□ 2.92
ECHDC3-202ENST00000420401 MRC2Q9UBG0 1479 aa33.26■■■□□ 2.92
ECHDC3-202ENST00000420401 WDR62O43379 1518 aa33.17■■■□□ 2.9
ECHDC3-202ENST00000420401 TOP2AP11388 1531 aaKnown RBP33.14■■■□□ 2.9
ECHDC3-202ENST00000420401 CEP164Q9UPV0 1460 aa33.05■■■□□ 2.88
ECHDC3-202ENST00000420401 FANCD2Q9BXW9 1451 aa32.96■■■□□ 2.87
ECHDC3-202ENST00000420401 OSCARQ8IYS5 282 aa32.87■■■□□ 2.85
ECHDC3-202ENST00000420401 CFTRP13569 1480 aa32.81■■■□□ 2.84
ECHDC3-202ENST00000420401 CCDC88BA6NC98 1476 aa32.78■■■□□ 2.84
ECHDC3-202ENST00000420401 SUPT5HO00267 1087 aaKnown RBP32.74■■■□□ 2.83
ECHDC3-202ENST00000420401 URB2Q14146 1524 aaKnown RBP32.69■■■□□ 2.82
ECHDC3-202ENST00000420401 PRDM2Q13029 1718 aa32.57■■■□□ 2.8
ECHDC3-202ENST00000420401 RIMBP3CA6NJZ7 1639 aa32.47■■■□□ 2.79
ECHDC3-202ENST00000420401 RIMBP3BA6NNM3 1639 aa32.47■■■□□ 2.79
ECHDC3-202ENST00000420401 RIMBP3Q9UFD9 1639 aa32.47■■■□□ 2.79
ECHDC3-202ENST00000420401 IFT140Q96RY7 1462 aa32.39■■■□□ 2.78
ECHDC3-202ENST00000420401 ZNF608Q9ULD9 1512 aaPredicted RBP32.37■■■□□ 2.77
ECHDC3-202ENST00000420401 ARHGEF11O15085 1522 aa32.29■■■□□ 2.76
ECHDC3-202ENST00000420401 TOPBP1Q92547 1522 aa32.26■■■□□ 2.76
ECHDC3-202ENST00000420401 EIF4G3O43432 1585 aaKnown RBP32.2■■■□□ 2.75
ECHDC3-202ENST00000420401 ABCC8Q09428 1581 aa32.2■■■□□ 2.75
ECHDC3-202ENST00000420401 CYB5RLQ6IPT4 315 aa32.14■■■□□ 2.74
ECHDC3-202ENST00000420401 DNMBPQ6XZF7 1577 aa32.12■■■□□ 2.73
ECHDC3-202ENST00000420401 CHD1O14646 1710 aa32.11■■■□□ 2.73
ECHDC3-202ENST00000420401 AQRO60306 1485 aaKnown RBP eCLIP32.04■■■□□ 2.72
ECHDC3-202ENST00000420401 FBLN2P98095 1184 aa32.03■■■□□ 2.72
ECHDC3-202ENST00000420401 TARBP1Q13395 1621 aaKnown RBP32.01■■■□□ 2.72
ECHDC3-202ENST00000420401 TRHP20396 242 aaPredicted RBP32.01■■■□□ 2.71
ECHDC3-202ENST00000420401 ARAP1Q96P48 1450 aa31.91■■■□□ 2.7
ECHDC3-202ENST00000420401 POLA1P09884 1462 aaPredicted RBP31.9■■■□□ 2.7
ECHDC3-202ENST00000420401 RAD54L2Q9Y4B4 1467 aa31.8■■■□□ 2.68
ECHDC3-202ENST00000420401 SOGA1O94964 1423 aa31.78■■■□□ 2.68
ECHDC3-202ENST00000420401 TDRD9Q8NDG6 1382 aaKnown RBP31.78■■■□□ 2.68
ECHDC3-202ENST00000420401 CUX1P39880 1505 aa31.75■■■□□ 2.67
ECHDC3-202ENST00000420401 SNAPC4Q5SXM2 1469 aa31.7■■■□□ 2.66
ECHDC3-202ENST00000420401 CHMP7Q8WUX9 453 aaPredicted RBP31.68■■■□□ 2.66
ECHDC3-202ENST00000420401 WDR97A6NE52 1622 aa31.67■■■□□ 2.66
ECHDC3-202ENST00000420401 FGD5Q6ZNL6 1462 aa31.66■■■□□ 2.66
ECHDC3-202ENST00000420401 SYNJ1O43426 1573 aa31.64■■■□□ 2.66
ECHDC3-202ENST00000420401 CLASP1Q7Z460 1538 aa31.64■■■□□ 2.66
ECHDC3-202ENST00000420401 WRNQ14191 1432 aaPredicted RBP eCLIP31.61■■■□□ 2.65
ECHDC3-202ENST00000420401 MAGI1Q96QZ7 1491 aaPredicted RBP31.59■■■□□ 2.65
ECHDC3-202ENST00000420401 GRIN2BQ13224 1484 aa31.55■■■□□ 2.64
ECHDC3-202ENST00000420401 SYNJ2O15056 1496 aa31.5■■■□□ 2.63
ECHDC3-202ENST00000420401 TOP2BQ02880 1626 aa31.49■■■□□ 2.63
ECHDC3-202ENST00000420401 AEBP2Q6ZN18 517 aaPredicted RBP31.46■■■□□ 2.63
ECHDC3-202ENST00000420401 BIVM-ERCC5R4GMW8 1640 aa31.46■■■□□ 2.63
ECHDC3-202ENST00000420401 PBRM1Q86U86 1689 aa31.45■■■□□ 2.63
ECHDC3-202ENST00000420401 GAPVD1Q14C86 1478 aa31.38■■■□□ 2.61
ECHDC3-202ENST00000420401 ABCA10Q8WWZ4 1543 aa31.37■■■□□ 2.61
ECHDC3-202ENST00000420401 ABCA5Q8WWZ7 1642 aa31.24■■■□□ 2.59
ECHDC3-202ENST00000420401 GRIN2AQ12879 1464 aa31.14■■■□□ 2.57
ECHDC3-202ENST00000420401 ERCC6L2Q5T890 1561 aa31.12■■■□□ 2.57
ECHDC3-202ENST00000420401 CEP170Q5SW79 1584 aa31.05■■■□□ 2.56
ECHDC3-202ENST00000420401 ADAMTS12P58397 1594 aa31.05■■■□□ 2.56
ECHDC3-202ENST00000420401 NUP160Q12769 1436 aa31.01■■■□□ 2.55
ECHDC3-202ENST00000420401 ERICH3Q5RHP9 1530 aa31■■■□□ 2.55
ECHDC3-202ENST00000420401 KIF27Q86VH2 1401 aa30.98■■■□□ 2.55
ECHDC3-202ENST00000420401 SHROOM2Q13796 1616 aa30.96■■■□□ 2.55
ECHDC3-202ENST00000420401 FHAD1B1AJZ9 1412 aa30.95■■■□□ 2.54
ECHDC3-202ENST00000420401 KIF13AQ9H1H9 1805 aa30.88■■■□□ 2.53
ECHDC3-202ENST00000420401 IGF1RP08069 1367 aa30.84■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms