RNA–Protein interactions for RNA: ENST00000420392.1

XRCC6P1-201, Transcript of X-ray repair cross complementing 6 pseudogene 1, humanhuman

BASIC

Gene XRCC6P1, Length 1,805 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC6P1-201ENST00000420392 NISCHQ9Y2I1 1504 aa20.03■□□□□ 0.8
XRCC6P1-201ENST00000420392 CCDC180Q9P1Z9 1646 aa17.66■□□□□ 0.42
XRCC6P1-201ENST00000420392 ABCC9O60706 1549 aa16.94■□□□□ 0.3
XRCC6P1-201ENST00000420392 ZCCHC6Q5VYS8 1495 aaKnown RBP16.84■□□□□ 0.29
XRCC6P1-201ENST00000420392 DCAF1Q9Y4B6 1507 aa16.64■□□□□ 0.25
XRCC6P1-201ENST00000420392 NACADO15069 1562 aa16.5■□□□□ 0.23
XRCC6P1-201ENST00000420392 MYO15BQ96JP2 1530 aa16.49■□□□□ 0.23
XRCC6P1-201ENST00000420392 DCAF8L2P0C7V8 631 aa16.45■□□□□ 0.22
XRCC6P1-201ENST00000420392 RB1CC1Q8TDY2 1594 aa16.45■□□□□ 0.22
XRCC6P1-201ENST00000420392 SHROOM4Q9ULL8 1493 aa16.18■□□□□ 0.18
XRCC6P1-201ENST00000420392 UNC13AQ9UPW8 1703 aa16.17■□□□□ 0.18
XRCC6P1-201ENST00000420392 SCRIBQ14160 1630 aa16.1■□□□□ 0.17
XRCC6P1-201ENST00000420392 BICRAQ9NZM4 1560 aa15.96■□□□□ 0.15
XRCC6P1-201ENST00000420392 PABPN1Q86U42 306 aaKnown RBP eCLIP15.84■□□□□ 0.13
XRCC6P1-201ENST00000420392 SUPT5HO00267 1087 aaKnown RBP15.59■□□□□ 0.09
XRCC6P1-201ENST00000420392 EIF4G1Q04637 1599 aaKnown RBP15.5■□□□□ 0.07
XRCC6P1-201ENST00000420392 RSF1Q96T23 1441 aaPredicted RBP15.5■□□□□ 0.07
XRCC6P1-201ENST00000420392 CECR2Q9BXF3 1484 aa15.49■□□□□ 0.07
XRCC6P1-201ENST00000420392 BAZ1AQ9NRL2 1556 aaPredicted RBP15.49■□□□□ 0.07
XRCC6P1-201ENST00000420392 MROH2BQ7Z745 1585 aa15.44■□□□□ 0.06
XRCC6P1-201ENST00000420392 SMARCA4P51532 1647 aa15.44■□□□□ 0.06
XRCC6P1-201ENST00000420392 CC2D2AQ9P2K1 1620 aa15.38■□□□□ 0.05
XRCC6P1-201ENST00000420392 WIZO95785 1651 aa15.36■□□□□ 0.05
XRCC6P1-201ENST00000420392 PEG3Q9GZU2 1588 aa15.29■□□□□ 0.04
XRCC6P1-201ENST00000420392 DNAJC5BQ9UF47 199 aa15.27■□□□□ 0.04
XRCC6P1-201ENST00000420392 SMARCA2P51531 1590 aa15.26■□□□□ 0.03
XRCC6P1-201ENST00000420392 ATAD2BQ9ULI0 1458 aa15.25■□□□□ 0.03
XRCC6P1-201ENST00000420392 TOP2AP11388 1531 aaKnown RBP15.22■□□□□ 0.03
XRCC6P1-201ENST00000420392 NCAPD3P42695 1498 aa15.19■□□□□ 0.02
XRCC6P1-201ENST00000420392 HMGXB3Q12766 1538 aa15.17■□□□□ 0.02
XRCC6P1-201ENST00000420392 BAZ1BQ9UIG0 1483 aaKnown RBP15.14■□□□□ 0.01
XRCC6P1-201ENST00000420392 AEBP2Q6ZN18 517 aaPredicted RBP15.06■□□□□ 0
XRCC6P1-201ENST00000420392 CHIC1Q5VXU3 224 aa15.01□□□□□ -0.01
XRCC6P1-201ENST00000420392 CCDC88BA6NC98 1476 aa15□□□□□ -0.01
XRCC6P1-201ENST00000420392 PRDM2Q13029 1718 aa14.79□□□□□ -0.04
XRCC6P1-201ENST00000420392 LAMC3Q9Y6N6 1575 aa14.78□□□□□ -0.04
XRCC6P1-201ENST00000420392 NESP48681 1621 aa14.76□□□□□ -0.05
XRCC6P1-201ENST00000420392 CADPSQ9ULU8 1353 aa14.74□□□□□ -0.05
XRCC6P1-201ENST00000420392 CFTRP13569 1480 aa14.74□□□□□ -0.05
XRCC6P1-201ENST00000420392 TRIM41Q8WV44 630 aa14.71□□□□□ -0.06
XRCC6P1-201ENST00000420392 ABCC8Q09428 1581 aa14.69□□□□□ -0.06
XRCC6P1-201ENST00000420392 KIF21AQ7Z4S6 1674 aa14.66□□□□□ -0.06
XRCC6P1-201ENST00000420392 PDS5BQ9NTI5 1447 aa14.63□□□□□ -0.07
XRCC6P1-201ENST00000420392 FANCD2Q9BXW9 1451 aa14.6□□□□□ -0.07
XRCC6P1-201ENST00000420392 WRNQ14191 1432 aaPredicted RBP eCLIP14.59□□□□□ -0.07
XRCC6P1-201ENST00000420392 BIVM-ERCC5R4GMW8 1640 aa14.59□□□□□ -0.07
XRCC6P1-201ENST00000420392 ERCC6Q03468 1493 aa14.58□□□□□ -0.08
XRCC6P1-201ENST00000420392 SYNJ1O43426 1573 aa14.57□□□□□ -0.08
XRCC6P1-201ENST00000420392 CEP164Q9UPV0 1460 aa14.56□□□□□ -0.08
XRCC6P1-201ENST00000420392 TOP2BQ02880 1626 aa14.55□□□□□ -0.08
XRCC6P1-201ENST00000420392 THOC2Q8NI27 1593 aaKnown RBP14.52□□□□□ -0.09
XRCC6P1-201ENST00000420392 MRC2Q9UBG0 1479 aa14.48□□□□□ -0.09
XRCC6P1-201ENST00000420392 EEA1Q15075 1411 aa14.46□□□□□ -0.09
XRCC6P1-201ENST00000420392 WDR62O43379 1518 aa14.45□□□□□ -0.1
XRCC6P1-201ENST00000420392 CUX1P39880 1505 aa14.44□□□□□ -0.1
XRCC6P1-201ENST00000420392 URB2Q14146 1524 aaKnown RBP14.44□□□□□ -0.1
XRCC6P1-201ENST00000420392 DNMBPQ6XZF7 1577 aa14.43□□□□□ -0.1
XRCC6P1-201ENST00000420392 TOPBP1Q92547 1522 aa14.41□□□□□ -0.1
XRCC6P1-201ENST00000420392 SOGA1O94964 1423 aa14.38□□□□□ -0.11
XRCC6P1-201ENST00000420392 LOC105371045A0A1W2PR82 267 aa14.37□□□□□ -0.11
XRCC6P1-201ENST00000420392 FAM9AQ8IZU1 332 aaPredicted RBP14.36□□□□□ -0.11
XRCC6P1-201ENST00000420392 CUX2O14529 1486 aa14.34□□□□□ -0.11
XRCC6P1-201ENST00000420392 RUSC2Q8N2Y8 1516 aa14.34□□□□□ -0.11
XRCC6P1-201ENST00000420392 KIF21BO75037 1637 aa14.31□□□□□ -0.12
XRCC6P1-201ENST00000420392 FGD5Q6ZNL6 1462 aa14.31□□□□□ -0.12
XRCC6P1-201ENST00000420392 POLA1P09884 1462 aaPredicted RBP14.3□□□□□ -0.12
XRCC6P1-201ENST00000420392 CSRNP3Q8WYN3 585 aa14.28□□□□□ -0.12
XRCC6P1-201ENST00000420392 TARBP1Q13395 1621 aaKnown RBP14.26□□□□□ -0.13
XRCC6P1-201ENST00000420392 WDR97A6NE52 1622 aa14.25□□□□□ -0.13
XRCC6P1-201ENST00000420392 GOLGA3Q08378 1498 aa14.23□□□□□ -0.13
XRCC6P1-201ENST00000420392 IFT140Q96RY7 1462 aa14.23□□□□□ -0.13
XRCC6P1-201ENST00000420392 KIF27Q86VH2 1401 aa14.23□□□□□ -0.13
XRCC6P1-201ENST00000420392 RAD54L2Q9Y4B4 1467 aa14.22□□□□□ -0.13
XRCC6P1-201ENST00000420392 ERICH3Q5RHP9 1530 aa14.2□□□□□ -0.14
XRCC6P1-201ENST00000420392 TNIKQ9UKE5 1360 aa14.19□□□□□ -0.14
XRCC6P1-201ENST00000420392 ABCA10Q8WWZ4 1543 aa14.18□□□□□ -0.14
XRCC6P1-201ENST00000420392 PRXQ9BXM0 1461 aa14.16□□□□□ -0.14
XRCC6P1-201ENST00000420392 ZNF608Q9ULD9 1512 aaPredicted RBP14.15□□□□□ -0.14
XRCC6P1-201ENST00000420392 EIF4G3O43432 1585 aaKnown RBP14.15□□□□□ -0.14
XRCC6P1-201ENST00000420392 ABCA5Q8WWZ7 1642 aa14.14□□□□□ -0.15
XRCC6P1-201ENST00000420392 RAPGEF2Q9Y4G8 1499 aa14.11□□□□□ -0.15
XRCC6P1-201ENST00000420392 PBRM1Q86U86 1689 aa14.11□□□□□ -0.15
XRCC6P1-201ENST00000420392 CUL7Q14999 1698 aa14.1□□□□□ -0.15
XRCC6P1-201ENST00000420392 TDRD9Q8NDG6 1382 aaKnown RBP14.1□□□□□ -0.15
XRCC6P1-201ENST00000420392 AQRO60306 1485 aaKnown RBP eCLIP14.09□□□□□ -0.15
XRCC6P1-201ENST00000420392 EHMT2Q96KQ7 1210 aa14.08□□□□□ -0.15
XRCC6P1-201ENST00000420392 CEP162Q5TB80 1403 aa14.08□□□□□ -0.15
XRCC6P1-201ENST00000420392 GAPVD1Q14C86 1478 aa14.08□□□□□ -0.16
XRCC6P1-201ENST00000420392 IGF1RP08069 1367 aa14.06□□□□□ -0.16
XRCC6P1-201ENST00000420392 UBTFP17480 764 aaKnown RBP14.05□□□□□ -0.16
XRCC6P1-201ENST00000420392 GRIN2BQ13224 1484 aa14.03□□□□□ -0.16
XRCC6P1-201ENST00000420392 CARMIL1Q5VZK9 1371 aa13.99□□□□□ -0.17
XRCC6P1-201ENST00000420392 CTTNBP2Q8WZ74 1663 aa13.99□□□□□ -0.17
XRCC6P1-201ENST00000420392 SNAPC4Q5SXM2 1469 aa13.99□□□□□ -0.17
XRCC6P1-201ENST00000420392 MAGI1Q96QZ7 1491 aaPredicted RBP13.98□□□□□ -0.17
XRCC6P1-201ENST00000420392 ADAMTS12P58397 1594 aa13.97□□□□□ -0.17
XRCC6P1-201ENST00000420392 CLIP1P30622 1438 aa13.96□□□□□ -0.17
XRCC6P1-201ENST00000420392 CHD1O14646 1710 aa13.95□□□□□ -0.18
XRCC6P1-201ENST00000420392 FHAD1B1AJZ9 1412 aa13.91□□□□□ -0.18
XRCC6P1-201ENST00000420392 SYNJ2O15056 1496 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms