RNA–Protein interactions for RNA: ENST00000420296.1

NDUFA3-207, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 3

Gene NDUFA3, Length 339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-207ENST00000420296 NISCHQ9Y2I1 1504 aa22.87■■□□□ 1.25
NDUFA3-207ENST00000420296 CCDC180Q9P1Z9 1646 aa20.56■□□□□ 0.88
NDUFA3-207ENST00000420296 ABCC9O60706 1549 aa20.5■□□□□ 0.87
NDUFA3-207ENST00000420296 RB1CC1Q8TDY2 1594 aa19.48■□□□□ 0.71
NDUFA3-207ENST00000420296 NACADO15069 1562 aa19.33■□□□□ 0.69
NDUFA3-207ENST00000420296 UNC13AQ9UPW8 1703 aa19.26■□□□□ 0.67
NDUFA3-207ENST00000420296 DCAF8L2P0C7V8 631 aa19.25■□□□□ 0.67
NDUFA3-207ENST00000420296 DNAJC5BQ9UF47 199 aa19.15■□□□□ 0.66
NDUFA3-207ENST00000420296 PABPN1Q86U42 306 aaKnown RBP eCLIP19.06■□□□□ 0.64
NDUFA3-207ENST00000420296 MYO15BQ96JP2 1530 aa19.02■□□□□ 0.64
NDUFA3-207ENST00000420296 BICRAQ9NZM4 1560 aa19.01■□□□□ 0.63
NDUFA3-207ENST00000420296 ZCCHC6Q5VYS8 1495 aaKnown RBP18.99■□□□□ 0.63
NDUFA3-207ENST00000420296 DCAF1Q9Y4B6 1507 aa18.84■□□□□ 0.61
NDUFA3-207ENST00000420296 SCRIBQ14160 1630 aa18.81■□□□□ 0.6
NDUFA3-207ENST00000420296 SHROOM4Q9ULL8 1493 aa18.56■□□□□ 0.56
NDUFA3-207ENST00000420296 CC2D2AQ9P2K1 1620 aa18.54■□□□□ 0.56
NDUFA3-207ENST00000420296 EIF4G1Q04637 1599 aaKnown RBP18.49■□□□□ 0.55
NDUFA3-207ENST00000420296 CECR2Q9BXF3 1484 aa18.4■□□□□ 0.54
NDUFA3-207ENST00000420296 SMARCA4P51532 1647 aa17.9■□□□□ 0.46
NDUFA3-207ENST00000420296 ATAD2BQ9ULI0 1458 aa17.82■□□□□ 0.44
NDUFA3-207ENST00000420296 NCAPD3P42695 1498 aa17.82■□□□□ 0.44
NDUFA3-207ENST00000420296 SMARCA2P51531 1590 aa17.76■□□□□ 0.43
NDUFA3-207ENST00000420296 HMGXB3Q12766 1538 aa17.75■□□□□ 0.43
NDUFA3-207ENST00000420296 BAZ1AQ9NRL2 1556 aaPredicted RBP17.74■□□□□ 0.43
NDUFA3-207ENST00000420296 MROH2BQ7Z745 1585 aa17.69■□□□□ 0.42
NDUFA3-207ENST00000420296 NESP48681 1621 aa17.66■□□□□ 0.42
NDUFA3-207ENST00000420296 BAZ1BQ9UIG0 1483 aaKnown RBP17.66■□□□□ 0.42
NDUFA3-207ENST00000420296 PEG3Q9GZU2 1588 aa17.66■□□□□ 0.42
NDUFA3-207ENST00000420296 ERCC6Q03468 1493 aa17.63■□□□□ 0.41
NDUFA3-207ENST00000420296 CUX2O14529 1486 aa17.54■□□□□ 0.4
NDUFA3-207ENST00000420296 WIZO95785 1651 aa17.54■□□□□ 0.4
NDUFA3-207ENST00000420296 KIF21AQ7Z4S6 1674 aa17.52■□□□□ 0.39
NDUFA3-207ENST00000420296 THOC2Q8NI27 1593 aaKnown RBP17.49■□□□□ 0.39
NDUFA3-207ENST00000420296 LAMC3Q9Y6N6 1575 aa17.46■□□□□ 0.39
NDUFA3-207ENST00000420296 DNAJC5Q9H3Z4 198 aa17.42■□□□□ 0.38
NDUFA3-207ENST00000420296 RSF1Q96T23 1441 aaPredicted RBP17.28■□□□□ 0.36
NDUFA3-207ENST00000420296 PDS5BQ9NTI5 1447 aa17.28■□□□□ 0.36
NDUFA3-207ENST00000420296 CADPSQ9ULU8 1353 aa17.28■□□□□ 0.36
NDUFA3-207ENST00000420296 TOP2AP11388 1531 aaKnown RBP17.23■□□□□ 0.35
NDUFA3-207ENST00000420296 MRC2Q9UBG0 1479 aa17.2■□□□□ 0.34
NDUFA3-207ENST00000420296 WDR62O43379 1518 aa17.19■□□□□ 0.34
NDUFA3-207ENST00000420296 CEP164Q9UPV0 1460 aa17.15■□□□□ 0.34
NDUFA3-207ENST00000420296 FANCD2Q9BXW9 1451 aa17.14■□□□□ 0.33
NDUFA3-207ENST00000420296 PRDM2Q13029 1718 aa17.14■□□□□ 0.33
NDUFA3-207ENST00000420296 CFTRP13569 1480 aa17.12■□□□□ 0.33
NDUFA3-207ENST00000420296 URB2Q14146 1524 aaKnown RBP17.05■□□□□ 0.32
NDUFA3-207ENST00000420296 CCDC88BA6NC98 1476 aa17.03■□□□□ 0.32
NDUFA3-207ENST00000420296 TOPBP1Q92547 1522 aa16.85■□□□□ 0.29
NDUFA3-207ENST00000420296 ZNF608Q9ULD9 1512 aaPredicted RBP16.84■□□□□ 0.29
NDUFA3-207ENST00000420296 DNMBPQ6XZF7 1577 aa16.8■□□□□ 0.28
NDUFA3-207ENST00000420296 EIF4G3O43432 1585 aaKnown RBP16.78■□□□□ 0.28
NDUFA3-207ENST00000420296 TRIM41Q8WV44 630 aa16.78■□□□□ 0.28
NDUFA3-207ENST00000420296 IFT140Q96RY7 1462 aa16.76■□□□□ 0.27
NDUFA3-207ENST00000420296 TARBP1Q13395 1621 aaKnown RBP16.74■□□□□ 0.27
NDUFA3-207ENST00000420296 CHD1O14646 1710 aa16.7■□□□□ 0.26
NDUFA3-207ENST00000420296 OSCARQ8IYS5 282 aa16.69■□□□□ 0.26
NDUFA3-207ENST00000420296 ABCC8Q09428 1581 aa16.68■□□□□ 0.26
NDUFA3-207ENST00000420296 POLA1P09884 1462 aaPredicted RBP16.67■□□□□ 0.26
NDUFA3-207ENST00000420296 RIMBP3CA6NJZ7 1639 aa16.66■□□□□ 0.26
NDUFA3-207ENST00000420296 RIMBP3BA6NNM3 1639 aa16.66■□□□□ 0.26
NDUFA3-207ENST00000420296 RIMBP3Q9UFD9 1639 aa16.66■□□□□ 0.26
NDUFA3-207ENST00000420296 AQRO60306 1485 aaKnown RBP eCLIP16.65■□□□□ 0.26
NDUFA3-207ENST00000420296 RAD54L2Q9Y4B4 1467 aa16.64■□□□□ 0.25
NDUFA3-207ENST00000420296 CUX1P39880 1505 aa16.62■□□□□ 0.25
NDUFA3-207ENST00000420296 FGD5Q6ZNL6 1462 aa16.6■□□□□ 0.25
NDUFA3-207ENST00000420296 WDR97A6NE52 1622 aa16.57■□□□□ 0.24
NDUFA3-207ENST00000420296 SUPT5HO00267 1087 aaKnown RBP16.57■□□□□ 0.24
NDUFA3-207ENST00000420296 ARHGEF11O15085 1522 aa16.55■□□□□ 0.24
NDUFA3-207ENST00000420296 SOGA1O94964 1423 aa16.54■□□□□ 0.24
NDUFA3-207ENST00000420296 TDRD9Q8NDG6 1382 aaKnown RBP16.53■□□□□ 0.24
NDUFA3-207ENST00000420296 PBRM1Q86U86 1689 aa16.51■□□□□ 0.23
NDUFA3-207ENST00000420296 SNAPC4Q5SXM2 1469 aa16.5■□□□□ 0.23
NDUFA3-207ENST00000420296 FBLN2P98095 1184 aa16.48■□□□□ 0.23
NDUFA3-207ENST00000420296 ABCA5Q8WWZ7 1642 aa16.42■□□□□ 0.22
NDUFA3-207ENST00000420296 ARAP1Q96P48 1450 aa16.42■□□□□ 0.22
NDUFA3-207ENST00000420296 CLASP1Q7Z460 1538 aa16.41■□□□□ 0.22
NDUFA3-207ENST00000420296 GRIN2BQ13224 1484 aa16.4■□□□□ 0.22
NDUFA3-207ENST00000420296 SYNJ1O43426 1573 aa16.39■□□□□ 0.21
NDUFA3-207ENST00000420296 MAGI1Q96QZ7 1491 aaPredicted RBP16.39■□□□□ 0.21
NDUFA3-207ENST00000420296 BIVM-ERCC5R4GMW8 1640 aa16.38■□□□□ 0.21
NDUFA3-207ENST00000420296 GAPVD1Q14C86 1478 aa16.37■□□□□ 0.21
NDUFA3-207ENST00000420296 ABCA10Q8WWZ4 1543 aa16.36■□□□□ 0.21
NDUFA3-207ENST00000420296 CYB5RLQ6IPT4 315 aa16.36■□□□□ 0.21
NDUFA3-207ENST00000420296 SYNJ2O15056 1496 aa16.35■□□□□ 0.21
NDUFA3-207ENST00000420296 TOP2BQ02880 1626 aa16.34■□□□□ 0.21
NDUFA3-207ENST00000420296 CHMP7Q8WUX9 453 aaPredicted RBP16.31■□□□□ 0.2
NDUFA3-207ENST00000420296 ADAMTS12P58397 1594 aa16.29■□□□□ 0.2
NDUFA3-207ENST00000420296 WRNQ14191 1432 aaPredicted RBP eCLIP16.28■□□□□ 0.2
NDUFA3-207ENST00000420296 ERCC6L2Q5T890 1561 aa16.24■□□□□ 0.19
NDUFA3-207ENST00000420296 CEP170Q5SW79 1584 aa16.23■□□□□ 0.19
NDUFA3-207ENST00000420296 GRIN2AQ12879 1464 aa16.22■□□□□ 0.19
NDUFA3-207ENST00000420296 ERICH3Q5RHP9 1530 aa16.15■□□□□ 0.18
NDUFA3-207ENST00000420296 NUP160Q12769 1436 aa16.14■□□□□ 0.17
NDUFA3-207ENST00000420296 TRHP20396 242 aaPredicted RBP16.14■□□□□ 0.17
NDUFA3-207ENST00000420296 SHROOM2Q13796 1616 aa16.14■□□□□ 0.17
NDUFA3-207ENST00000420296 FHAD1B1AJZ9 1412 aa16.12■□□□□ 0.17
NDUFA3-207ENST00000420296 RUSC2Q8N2Y8 1516 aa16.07■□□□□ 0.16
NDUFA3-207ENST00000420296 CUL7Q14999 1698 aa15.99■□□□□ 0.15
NDUFA3-207ENST00000420296 PRG4Q92954 1404 aaPredicted RBP15.98■□□□□ 0.15
NDUFA3-207ENST00000420296 KIF13AQ9H1H9 1805 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 129.4 ms