RNA–Protein interactions for RNA: ENST00000420291.1

BRPF1-202, Transcript of bromodomain and PHD finger containing 1, humanhuman

TSL 3

Gene BRPF1, Length 860 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF1-202ENST00000420291 NISCHQ9Y2I1 1504 aa55.07■■■■■ 6.41
BRPF1-202ENST00000420291 CCDC180Q9P1Z9 1646 aa48.96■■■■■ 5.43
BRPF1-202ENST00000420291 ABCC9O60706 1549 aa48.18■■■■■ 5.3
BRPF1-202ENST00000420291 RB1CC1Q8TDY2 1594 aa46.26■■■■■ 5
BRPF1-202ENST00000420291 NACADO15069 1562 aa46.2■■■■■ 4.99
BRPF1-202ENST00000420291 DCAF8L2P0C7V8 631 aa46.06■■■■■ 4.96
BRPF1-202ENST00000420291 MYO15BQ96JP2 1530 aa45.94■■■■■ 4.95
BRPF1-202ENST00000420291 ZCCHC6Q5VYS8 1495 aaKnown RBP45.8■■■■■ 4.92
BRPF1-202ENST00000420291 DCAF1Q9Y4B6 1507 aa45.62■■■■■ 4.89
BRPF1-202ENST00000420291 PABPN1Q86U42 306 aaKnown RBP eCLIP45.05■■■■■ 4.8
BRPF1-202ENST00000420291 UNC13AQ9UPW8 1703 aa45.05■■■■■ 4.8
BRPF1-202ENST00000420291 BICRAQ9NZM4 1560 aa44.89■■■■■ 4.78
BRPF1-202ENST00000420291 DNAJC5BQ9UF47 199 aa44.61■■■■■ 4.73
BRPF1-202ENST00000420291 SCRIBQ14160 1630 aa44.59■■■■■ 4.73
BRPF1-202ENST00000420291 SHROOM4Q9ULL8 1493 aa44.48■■■■■ 4.71
BRPF1-202ENST00000420291 EIF4G1Q04637 1599 aaKnown RBP43.71■■■■■ 4.59
BRPF1-202ENST00000420291 CC2D2AQ9P2K1 1620 aa43.56■■■■■ 4.56
BRPF1-202ENST00000420291 CECR2Q9BXF3 1484 aa43.38■■■■■ 4.53
BRPF1-202ENST00000420291 NCAPD3P42695 1498 aa42.72■■■■■ 4.43
BRPF1-202ENST00000420291 SMARCA4P51532 1647 aa42.7■■■■■ 4.43
BRPF1-202ENST00000420291 BAZ1AQ9NRL2 1556 aaPredicted RBP42.66■■■■■ 4.42
BRPF1-202ENST00000420291 ATAD2BQ9ULI0 1458 aa42.64■■■■■ 4.42
BRPF1-202ENST00000420291 SMARCA2P51531 1590 aa42.52■■■■■ 4.4
BRPF1-202ENST00000420291 MROH2BQ7Z745 1585 aa42.4■■■■■ 4.38
BRPF1-202ENST00000420291 PEG3Q9GZU2 1588 aa42.39■■■■■ 4.38
BRPF1-202ENST00000420291 HMGXB3Q12766 1538 aa42.38■■■■■ 4.37
BRPF1-202ENST00000420291 BAZ1BQ9UIG0 1483 aaKnown RBP42.2■■■■■ 4.35
BRPF1-202ENST00000420291 RSF1Q96T23 1441 aaPredicted RBP41.89■■■■■ 4.3
BRPF1-202ENST00000420291 WIZO95785 1651 aa41.84■■■■■ 4.29
BRPF1-202ENST00000420291 NESP48681 1621 aa41.63■■■■■ 4.26
BRPF1-202ENST00000420291 ERCC6Q03468 1493 aa41.53■■■■■ 4.24
BRPF1-202ENST00000420291 LAMC3Q9Y6N6 1575 aa41.51■■■■■ 4.24
BRPF1-202ENST00000420291 TOP2AP11388 1531 aaKnown RBP41.44■■■■■ 4.23
BRPF1-202ENST00000420291 CADPSQ9ULU8 1353 aa41.44■■■■■ 4.22
BRPF1-202ENST00000420291 PDS5BQ9NTI5 1447 aa41.31■■■■■ 4.2
BRPF1-202ENST00000420291 CUX2O14529 1486 aa41.28■■■■■ 4.2
BRPF1-202ENST00000420291 CFTRP13569 1480 aa41.13■■■■■ 4.17
BRPF1-202ENST00000420291 CCDC88BA6NC98 1476 aa41.02■■■■■ 4.16
BRPF1-202ENST00000420291 THOC2Q8NI27 1593 aaKnown RBP41.01■■■■■ 4.16
BRPF1-202ENST00000420291 KIF21AQ7Z4S6 1674 aa41.01■■■■■ 4.15
BRPF1-202ENST00000420291 FANCD2Q9BXW9 1451 aa40.89■■■■■ 4.14
BRPF1-202ENST00000420291 MRC2Q9UBG0 1479 aa40.84■■■■■ 4.13
BRPF1-202ENST00000420291 CEP164Q9UPV0 1460 aa40.83■■■■■ 4.13
BRPF1-202ENST00000420291 WDR62O43379 1518 aa40.72■■■■■ 4.11
BRPF1-202ENST00000420291 SUPT5HO00267 1087 aaKnown RBP40.54■■■■■ 4.08
BRPF1-202ENST00000420291 PRDM2Q13029 1718 aa40.53■■■■■ 4.08
BRPF1-202ENST00000420291 URB2Q14146 1524 aaKnown RBP40.48■■■■■ 4.07
BRPF1-202ENST00000420291 DNAJC5Q9H3Z4 198 aa40.43■■■■■ 4.06
BRPF1-202ENST00000420291 ABCC8Q09428 1581 aa40.24■■■■■ 4.03
BRPF1-202ENST00000420291 TOPBP1Q92547 1522 aa40.19■■■■■ 4.02
BRPF1-202ENST00000420291 DNMBPQ6XZF7 1577 aa40.09■■■■■ 4.01
BRPF1-202ENST00000420291 IFT140Q96RY7 1462 aa40.03■■■■■ 4
BRPF1-202ENST00000420291 POLA1P09884 1462 aaPredicted RBP39.84■■■■□ 3.97
BRPF1-202ENST00000420291 ZNF608Q9ULD9 1512 aaPredicted RBP39.84■■■■□ 3.97
BRPF1-202ENST00000420291 CUX1P39880 1505 aa39.78■■■■□ 3.96
BRPF1-202ENST00000420291 TARBP1Q13395 1621 aaKnown RBP39.76■■■■□ 3.95
BRPF1-202ENST00000420291 SOGA1O94964 1423 aa39.71■■■■□ 3.95
BRPF1-202ENST00000420291 FGD5Q6ZNL6 1462 aa39.68■■■■□ 3.94
BRPF1-202ENST00000420291 RAD54L2Q9Y4B4 1467 aa39.65■■■■□ 3.94
BRPF1-202ENST00000420291 AQRO60306 1485 aaKnown RBP eCLIP39.61■■■■□ 3.932e-6■■□□□ 13.6
BRPF1-202ENST00000420291 OSCARQ8IYS5 282 aa39.6■■■■□ 3.93
BRPF1-202ENST00000420291 EIF4G3O43432 1585 aaKnown RBP39.58■■■■□ 3.93
BRPF1-202ENST00000420291 TDRD9Q8NDG6 1382 aaKnown RBP39.51■■■■□ 3.92
BRPF1-202ENST00000420291 WRNQ14191 1432 aaPredicted RBP eCLIP39.46■■■■□ 3.91
BRPF1-202ENST00000420291 WDR97A6NE52 1622 aa39.45■■■■□ 3.91
BRPF1-202ENST00000420291 TOP2BQ02880 1626 aa39.36■■■■□ 3.89
BRPF1-202ENST00000420291 ABCA10Q8WWZ4 1543 aa39.34■■■■□ 3.89
BRPF1-202ENST00000420291 BIVM-ERCC5R4GMW8 1640 aa39.31■■■■□ 3.88
BRPF1-202ENST00000420291 SYNJ1O43426 1573 aa39.29■■■■□ 3.88
BRPF1-202ENST00000420291 GRIN2BQ13224 1484 aa39.26■■■■□ 3.88
BRPF1-202ENST00000420291 GAPVD1Q14C86 1478 aa39.22■■■■□ 3.87
BRPF1-202ENST00000420291 MAGI1Q96QZ7 1491 aaPredicted RBP39.18■■■■□ 3.86
BRPF1-202ENST00000420291 SNAPC4Q5SXM2 1469 aa39.17■■■■□ 3.86
BRPF1-202ENST00000420291 FBLN2P98095 1184 aa39.15■■■■□ 3.86
BRPF1-202ENST00000420291 ABCA5Q8WWZ7 1642 aa39.11■■■■□ 3.85
BRPF1-202ENST00000420291 CHMP7Q8WUX9 453 aaPredicted RBP39.07■■■■□ 3.85
BRPF1-202ENST00000420291 CHD1O14646 1710 aa39.06■■■■□ 3.84
BRPF1-202ENST00000420291 SYNJ2O15056 1496 aa39.04■■■■□ 3.84
BRPF1-202ENST00000420291 PBRM1Q86U86 1689 aa38.97■■■■□ 3.83
BRPF1-202ENST00000420291 ERICH3Q5RHP9 1530 aa38.84■■■■□ 3.81
BRPF1-202ENST00000420291 ARHGEF11O15085 1522 aa38.84■■■■□ 3.81
BRPF1-202ENST00000420291 TRIM41Q8WV44 630 aa38.81■■■■□ 3.8
BRPF1-202ENST00000420291 RIMBP3CA6NJZ7 1639 aa38.81■■■■□ 3.8
BRPF1-202ENST00000420291 RIMBP3BA6NNM3 1639 aa38.81■■■■□ 3.8
BRPF1-202ENST00000420291 RIMBP3Q9UFD9 1639 aa38.81■■■■□ 3.8
BRPF1-202ENST00000420291 FHAD1B1AJZ9 1412 aa38.79■■■■□ 3.8
BRPF1-202ENST00000420291 CLASP1Q7Z460 1538 aa38.79■■■■□ 3.8
BRPF1-202ENST00000420291 ADAMTS12P58397 1594 aa38.74■■■■□ 3.79
BRPF1-202ENST00000420291 GRIN2AQ12879 1464 aa38.73■■■■□ 3.79
BRPF1-202ENST00000420291 KIF27Q86VH2 1401 aa38.67■■■■□ 3.78
BRPF1-202ENST00000420291 NUP160Q12769 1436 aa38.63■■■■□ 3.78
BRPF1-202ENST00000420291 IGF1RP08069 1367 aa38.63■■■■□ 3.77
BRPF1-202ENST00000420291 CYB5RLQ6IPT4 315 aa38.56■■■■□ 3.76
BRPF1-202ENST00000420291 ARAP1Q96P48 1450 aa38.52■■■■□ 3.76
BRPF1-202ENST00000420291 CEP170Q5SW79 1584 aa38.5■■■■□ 3.75
BRPF1-202ENST00000420291 CUL7Q14999 1698 aa38.35■■■■□ 3.73
BRPF1-202ENST00000420291 CARMIL1Q5VZK9 1371 aa38.34■■■■□ 3.73
BRPF1-202ENST00000420291 SHROOM2Q13796 1616 aa38.28■■■■□ 3.72
BRPF1-202ENST00000420291 JPH4Q96JJ6 628 aa38.27■■■■□ 3.72
BRPF1-202ENST00000420291 RUSC2Q8N2Y8 1516 aa38.2■■■■□ 3.71
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms