RNA–Protein interactions for RNA: ENST00000419960.1

LINC02054-201, Transcript of long intergenic non-protein coding RNA 2054, humanhuman

TSL 3 BASIC

Gene LINC02054, Length 885 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02054-201ENST00000419960 NISCHQ9Y2I1 1504 aa28.79■■■□□ 2.2
LINC02054-201ENST00000419960 CCDC180Q9P1Z9 1646 aa25.71■■□□□ 1.71
LINC02054-201ENST00000419960 ABCC9O60706 1549 aa25.44■■□□□ 1.66
LINC02054-201ENST00000419960 RB1CC1Q8TDY2 1594 aa24.33■■□□□ 1.48
LINC02054-201ENST00000419960 NACADO15069 1562 aa24.24■■□□□ 1.47
LINC02054-201ENST00000419960 DCAF8L2P0C7V8 631 aa24.08■■□□□ 1.45
LINC02054-201ENST00000419960 MYO15BQ96JP2 1530 aa24.02■■□□□ 1.44
LINC02054-201ENST00000419960 ZCCHC6Q5VYS8 1495 aaKnown RBP23.92■■□□□ 1.42
LINC02054-201ENST00000419960 UNC13AQ9UPW8 1703 aa23.83■■□□□ 1.41
LINC02054-201ENST00000419960 DCAF1Q9Y4B6 1507 aa23.8■■□□□ 1.4
LINC02054-201ENST00000419960 PABPN1Q86U42 306 aaKnown RBP eCLIP23.71■■□□□ 1.39
LINC02054-201ENST00000419960 DNAJC5BQ9UF47 199 aa23.69■■□□□ 1.38
LINC02054-201ENST00000419960 BICRAQ9NZM4 1560 aa23.67■■□□□ 1.38
LINC02054-201ENST00000419960 SCRIBQ14160 1630 aa23.42■■□□□ 1.34
LINC02054-201ENST00000419960 SHROOM4Q9ULL8 1493 aa23.34■■□□□ 1.33
LINC02054-201ENST00000419960 EIF4G1Q04637 1599 aaKnown RBP23.02■■□□□ 1.28
LINC02054-201ENST00000419960 CC2D2AQ9P2K1 1620 aa23.01■■□□□ 1.27
LINC02054-201ENST00000419960 CECR2Q9BXF3 1484 aa22.89■■□□□ 1.25
LINC02054-201ENST00000419960 SMARCA4P51532 1647 aa22.39■■□□□ 1.18
LINC02054-201ENST00000419960 NCAPD3P42695 1498 aa22.39■■□□□ 1.17
LINC02054-201ENST00000419960 ATAD2BQ9ULI0 1458 aa22.35■■□□□ 1.17
LINC02054-201ENST00000419960 BAZ1AQ9NRL2 1556 aaPredicted RBP22.3■■□□□ 1.16
LINC02054-201ENST00000419960 SMARCA2P51531 1590 aa22.29■■□□□ 1.16
LINC02054-201ENST00000419960 HMGXB3Q12766 1538 aa22.24■■□□□ 1.15
LINC02054-201ENST00000419960 PEG3Q9GZU2 1588 aa22.2■■□□□ 1.14
LINC02054-201ENST00000419960 MROH2BQ7Z745 1585 aa22.19■■□□□ 1.14
LINC02054-201ENST00000419960 BAZ1BQ9UIG0 1483 aaKnown RBP22.12■■□□□ 1.13
LINC02054-201ENST00000419960 NESP48681 1621 aa21.95■■□□□ 1.1
LINC02054-201ENST00000419960 WIZO95785 1651 aa21.92■■□□□ 1.1
LINC02054-201ENST00000419960 ERCC6Q03468 1493 aa21.9■■□□□ 1.1
LINC02054-201ENST00000419960 CUX2O14529 1486 aa21.83■■□□□ 1.08
LINC02054-201ENST00000419960 LAMC3Q9Y6N6 1575 aa21.82■■□□□ 1.08
LINC02054-201ENST00000419960 RSF1Q96T23 1441 aaPredicted RBP21.82■■□□□ 1.08
LINC02054-201ENST00000419960 CADPSQ9ULU8 1353 aa21.71■■□□□ 1.07
LINC02054-201ENST00000419960 THOC2Q8NI27 1593 aaKnown RBP21.69■■□□□ 1.06
LINC02054-201ENST00000419960 KIF21AQ7Z4S6 1674 aa21.67■■□□□ 1.06
LINC02054-201ENST00000419960 PDS5BQ9NTI5 1447 aa21.67■■□□□ 1.06
LINC02054-201ENST00000419960 TOP2AP11388 1531 aaKnown RBP21.65■■□□□ 1.06
LINC02054-201ENST00000419960 DNAJC5Q9H3Z4 198 aa21.53■■□□□ 1.04
LINC02054-201ENST00000419960 CFTRP13569 1480 aa21.52■■□□□ 1.04
LINC02054-201ENST00000419960 MRC2Q9UBG0 1479 aa21.48■■□□□ 1.03
LINC02054-201ENST00000419960 FANCD2Q9BXW9 1451 aa21.45■■□□□ 1.02
LINC02054-201ENST00000419960 CEP164Q9UPV0 1460 aa21.44■■□□□ 1.02
LINC02054-201ENST00000419960 WDR62O43379 1518 aa21.44■■□□□ 1.02
LINC02054-201ENST00000419960 CCDC88BA6NC98 1476 aa21.42■■□□□ 1.02
LINC02054-201ENST00000419960 PRDM2Q13029 1718 aa21.32■■□□□ 1
LINC02054-201ENST00000419960 URB2Q14146 1524 aaKnown RBP21.29■■□□□ 1
LINC02054-201ENST00000419960 TOPBP1Q92547 1522 aa21.09■□□□□ 0.97
LINC02054-201ENST00000419960 ABCC8Q09428 1581 aa21.03■□□□□ 0.96
LINC02054-201ENST00000419960 DNMBPQ6XZF7 1577 aa21.02■□□□□ 0.96
LINC02054-201ENST00000419960 IFT140Q96RY7 1462 aa21.01■□□□□ 0.95
LINC02054-201ENST00000419960 SUPT5HO00267 1087 aaKnown RBP20.98■□□□□ 0.95
LINC02054-201ENST00000419960 ZNF608Q9ULD9 1512 aaPredicted RBP20.97■□□□□ 0.95
LINC02054-201ENST00000419960 TARBP1Q13395 1621 aaKnown RBP20.9■□□□□ 0.94
LINC02054-201ENST00000419960 POLA1P09884 1462 aaPredicted RBP20.89■□□□□ 0.94
LINC02054-201ENST00000419960 EIF4G3O43432 1585 aaKnown RBP20.85■□□□□ 0.93
LINC02054-201ENST00000419960 OSCARQ8IYS5 282 aa20.85■□□□□ 0.93
LINC02054-201ENST00000419960 CUX1P39880 1505 aa20.83■□□□□ 0.92
LINC02054-201ENST00000419960 AQRO60306 1485 aaKnown RBP eCLIP20.81■□□□□ 0.92
LINC02054-201ENST00000419960 RAD54L2Q9Y4B4 1467 aa20.8■□□□□ 0.92
LINC02054-201ENST00000419960 FGD5Q6ZNL6 1462 aa20.78■□□□□ 0.92
LINC02054-201ENST00000419960 SOGA1O94964 1423 aa20.78■□□□□ 0.92
LINC02054-201ENST00000419960 TDRD9Q8NDG6 1382 aaKnown RBP20.71■□□□□ 0.91
LINC02054-201ENST00000419960 WDR97A6NE52 1622 aa20.67■□□□□ 0.9
LINC02054-201ENST00000419960 CHD1O14646 1710 aa20.66■□□□□ 0.9
LINC02054-201ENST00000419960 TRIM41Q8WV44 630 aa20.63■□□□□ 0.89
LINC02054-201ENST00000419960 SNAPC4Q5SXM2 1469 aa20.59■□□□□ 0.89
LINC02054-201ENST00000419960 ABCA10Q8WWZ4 1543 aa20.58■□□□□ 0.89
LINC02054-201ENST00000419960 RIMBP3CA6NJZ7 1639 aa20.58■□□□□ 0.89
LINC02054-201ENST00000419960 RIMBP3BA6NNM3 1639 aa20.58■□□□□ 0.89
LINC02054-201ENST00000419960 RIMBP3Q9UFD9 1639 aa20.58■□□□□ 0.89
LINC02054-201ENST00000419960 GRIN2BQ13224 1484 aa20.57■□□□□ 0.88
LINC02054-201ENST00000419960 BIVM-ERCC5R4GMW8 1640 aa20.56■□□□□ 0.88
LINC02054-201ENST00000419960 FBLN2P98095 1184 aa20.55■□□□□ 0.88
LINC02054-201ENST00000419960 TOP2BQ02880 1626 aa20.55■□□□□ 0.88
LINC02054-201ENST00000419960 MAGI1Q96QZ7 1491 aaPredicted RBP20.55■□□□□ 0.88
LINC02054-201ENST00000419960 WRNQ14191 1432 aaPredicted RBP eCLIP20.54■□□□□ 0.88
LINC02054-201ENST00000419960 ARHGEF11O15085 1522 aa20.54■□□□□ 0.88
LINC02054-201ENST00000419960 SYNJ1O43426 1573 aa20.54■□□□□ 0.88
LINC02054-201ENST00000419960 GAPVD1Q14C86 1478 aa20.53■□□□□ 0.88
LINC02054-201ENST00000419960 ABCA5Q8WWZ7 1642 aa20.53■□□□□ 0.88
LINC02054-201ENST00000419960 PBRM1Q86U86 1689 aa20.51■□□□□ 0.87
LINC02054-201ENST00000419960 SYNJ2O15056 1496 aa20.47■□□□□ 0.87
LINC02054-201ENST00000419960 CHMP7Q8WUX9 453 aaPredicted RBP20.46■□□□□ 0.87
LINC02054-201ENST00000419960 CLASP1Q7Z460 1538 aa20.45■□□□□ 0.86
LINC02054-201ENST00000419960 ARAP1Q96P48 1450 aa20.37■□□□□ 0.85
LINC02054-201ENST00000419960 ADAMTS12P58397 1594 aa20.34■□□□□ 0.85
LINC02054-201ENST00000419960 CYB5RLQ6IPT4 315 aa20.34■□□□□ 0.85
LINC02054-201ENST00000419960 ERICH3Q5RHP9 1530 aa20.32■□□□□ 0.84
LINC02054-201ENST00000419960 GRIN2AQ12879 1464 aa20.31■□□□□ 0.84
LINC02054-201ENST00000419960 FHAD1B1AJZ9 1412 aa20.28■□□□□ 0.84
LINC02054-201ENST00000419960 NUP160Q12769 1436 aa20.26■□□□□ 0.83
LINC02054-201ENST00000419960 CEP170Q5SW79 1584 aa20.25■□□□□ 0.83
LINC02054-201ENST00000419960 ERCC6L2Q5T890 1561 aa20.15■□□□□ 0.82
LINC02054-201ENST00000419960 SHROOM2Q13796 1616 aa20.14■□□□□ 0.81
LINC02054-201ENST00000419960 IGF1RP08069 1367 aa20.13■□□□□ 0.81
LINC02054-201ENST00000419960 KIF27Q86VH2 1401 aa20.12■□□□□ 0.81
LINC02054-201ENST00000419960 CUL7Q14999 1698 aa20.06■□□□□ 0.8
LINC02054-201ENST00000419960 RUSC2Q8N2Y8 1516 aa20.05■□□□□ 0.8
LINC02054-201ENST00000419960 JPH4Q96JJ6 628 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms