RNA–Protein interactions for RNA: ENST00000419857.1

EML3-204, Transcript of echinoderm microtubule associated protein like 3, humanhuman

TSL 4

Gene EML3, Length 578 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EML3-204ENST00000419857 NISCHQ9Y2I1 1504 aa49.21■■■■■ 5.47
EML3-204ENST00000419857 CCDC180Q9P1Z9 1646 aa44.21■■■■■ 4.67
EML3-204ENST00000419857 ABCC9O60706 1549 aa43.99■■■■■ 4.63
EML3-204ENST00000419857 RB1CC1Q8TDY2 1594 aa42.01■■■■■ 4.32
EML3-204ENST00000419857 NACADO15069 1562 aa41.76■■■■■ 4.28
EML3-204ENST00000419857 MYO15BQ96JP2 1530 aa41.29■■■■■ 4.2
EML3-204ENST00000419857 DCAF8L2P0C7V8 631 aa41.28■■■■■ 4.2
EML3-204ENST00000419857 DNAJC5BQ9UF47 199 aa41.2■■■■■ 4.19
EML3-204ENST00000419857 UNC13AQ9UPW8 1703 aa41.05■■■■■ 4.16
EML3-204ENST00000419857 PABPN1Q86U42 306 aaKnown RBP eCLIP40.89■■■■■ 4.14
EML3-204ENST00000419857 ZCCHC6Q5VYS8 1495 aaKnown RBP40.82■■■■■ 4.12
EML3-204ENST00000419857 BICRAQ9NZM4 1560 aa40.78■■■■■ 4.12
EML3-204ENST00000419857 DCAF1Q9Y4B6 1507 aa40.75■■■■■ 4.11
EML3-204ENST00000419857 SHROOM4Q9ULL8 1493 aa40.36■■■■■ 4.05
EML3-204ENST00000419857 SCRIBQ14160 1630 aa40.14■■■■■ 4.02
EML3-204ENST00000419857 CC2D2AQ9P2K1 1620 aa39.8■■■■□ 3.96
EML3-204ENST00000419857 EIF4G1Q04637 1599 aaKnown RBP39.76■■■■□ 3.95
EML3-204ENST00000419857 CECR2Q9BXF3 1484 aa39.67■■■■□ 3.94
EML3-204ENST00000419857 NCAPD3P42695 1498 aa38.54■■■■□ 3.76
EML3-204ENST00000419857 ATAD2BQ9ULI0 1458 aa38.4■■■■□ 3.74
EML3-204ENST00000419857 SMARCA4P51532 1647 aa38.38■■■■□ 3.73
EML3-204ENST00000419857 SMARCA2P51531 1590 aa38.33■■■■□ 3.73
EML3-204ENST00000419857 HMGXB3Q12766 1538 aa38.28■■■■□ 3.72
EML3-204ENST00000419857 BAZ1AQ9NRL2 1556 aaPredicted RBP38.21■■■■□ 3.71
EML3-204ENST00000419857 PEG3Q9GZU2 1588 aa38.08■■■■□ 3.69
EML3-204ENST00000419857 CUX2O14529 1486 aa38.02■■■■□ 3.68
EML3-204ENST00000419857 BAZ1BQ9UIG0 1483 aaKnown RBP38.01■■■■□ 3.67
EML3-204ENST00000419857 ERCC6Q03468 1493 aa37.99■■■■□ 3.67
EML3-204ENST00000419857 MROH2BQ7Z745 1585 aa37.87■■■■□ 3.65
EML3-204ENST00000419857 DNAJC5Q9H3Z4 198 aa37.86■■■■□ 3.65
EML3-204ENST00000419857 NESP48681 1621 aa37.8■■■■□ 3.64
EML3-204ENST00000419857 LAMC3Q9Y6N6 1575 aa37.67■■■■□ 3.62
EML3-204ENST00000419857 THOC2Q8NI27 1593 aaKnown RBP37.51■■■■□ 3.6
EML3-204ENST00000419857 PDS5BQ9NTI5 1447 aa37.41■■■■□ 3.58
EML3-204ENST00000419857 WIZO95785 1651 aa37.41■■■■□ 3.58
EML3-204ENST00000419857 KIF21AQ7Z4S6 1674 aa37.37■■■■□ 3.57
EML3-204ENST00000419857 CADPSQ9ULU8 1353 aa37.33■■■■□ 3.57
EML3-204ENST00000419857 RSF1Q96T23 1441 aaPredicted RBP37.11■■■■□ 3.53
EML3-204ENST00000419857 MRC2Q9UBG0 1479 aa37.08■■■■□ 3.53
EML3-204ENST00000419857 WDR62O43379 1518 aa37.02■■■■□ 3.52
EML3-204ENST00000419857 TOP2AP11388 1531 aaKnown RBP37■■■■□ 3.51
EML3-204ENST00000419857 CFTRP13569 1480 aa36.94■■■■□ 3.5
EML3-204ENST00000419857 CEP164Q9UPV0 1460 aa36.94■■■■□ 3.5
EML3-204ENST00000419857 FANCD2Q9BXW9 1451 aa36.88■■■■□ 3.5
EML3-204ENST00000419857 PRDM2Q13029 1718 aa36.63■■■■□ 3.45
EML3-204ENST00000419857 URB2Q14146 1524 aaKnown RBP36.58■■■■□ 3.45
EML3-204ENST00000419857 CCDC88BA6NC98 1476 aa36.54■■■■□ 3.44
EML3-204ENST00000419857 IFT140Q96RY7 1462 aa36.22■■■■□ 3.39
EML3-204ENST00000419857 TOPBP1Q92547 1522 aa36.21■■■■□ 3.39
EML3-204ENST00000419857 ABCC8Q09428 1581 aa36.2■■■■□ 3.39
EML3-204ENST00000419857 OSCARQ8IYS5 282 aa36.2■■■■□ 3.39
EML3-204ENST00000419857 DNMBPQ6XZF7 1577 aa36.1■■■■□ 3.37
EML3-204ENST00000419857 ZNF608Q9ULD9 1512 aaPredicted RBP36.08■■■■□ 3.37
EML3-204ENST00000419857 TRIM41Q8WV44 630 aa36.08■■■■□ 3.37
EML3-204ENST00000419857 EIF4G3O43432 1585 aaKnown RBP35.94■■■■□ 3.34
EML3-204ENST00000419857 TARBP1Q13395 1621 aaKnown RBP35.91■■■■□ 3.34
EML3-204ENST00000419857 POLA1P09884 1462 aaPredicted RBP35.84■■■■□ 3.33
EML3-204ENST00000419857 RIMBP3CA6NJZ7 1639 aa35.75■■■■□ 3.31
EML3-204ENST00000419857 RIMBP3BA6NNM3 1639 aa35.75■■■■□ 3.31
EML3-204ENST00000419857 RIMBP3Q9UFD9 1639 aa35.75■■■■□ 3.31
EML3-204ENST00000419857 AQRO60306 1485 aaKnown RBP eCLIP35.75■■■■□ 3.314e-6■■□□□ 11.5
EML3-204ENST00000419857 CHD1O14646 1710 aa35.66■■■■□ 3.3
EML3-204ENST00000419857 ARHGEF11O15085 1522 aa35.65■■■■□ 3.3
EML3-204ENST00000419857 RAD54L2Q9Y4B4 1467 aa35.65■■■■□ 3.3
EML3-204ENST00000419857 SOGA1O94964 1423 aa35.65■■■■□ 3.3
EML3-204ENST00000419857 WDR97A6NE52 1622 aa35.65■■■■□ 3.3
EML3-204ENST00000419857 FGD5Q6ZNL6 1462 aa35.6■■■■□ 3.29
EML3-204ENST00000419857 CUX1P39880 1505 aa35.59■■■■□ 3.29
EML3-204ENST00000419857 TDRD9Q8NDG6 1382 aaKnown RBP35.52■■■■□ 3.28
EML3-204ENST00000419857 SNAPC4Q5SXM2 1469 aa35.42■■■■□ 3.26
EML3-204ENST00000419857 FBLN2P98095 1184 aa35.42■■■■□ 3.26
EML3-204ENST00000419857 MAGI1Q96QZ7 1491 aaPredicted RBP35.4■■■■□ 3.26
EML3-204ENST00000419857 GRIN2BQ13224 1484 aa35.37■■■■□ 3.25
EML3-204ENST00000419857 SUPT5HO00267 1087 aaKnown RBP35.34■■■■□ 3.25
EML3-204ENST00000419857 ARAP1Q96P48 1450 aa35.29■■■■□ 3.24
EML3-204ENST00000419857 CLASP1Q7Z460 1538 aa35.29■■■■□ 3.24
EML3-204ENST00000419857 CYB5RLQ6IPT4 315 aa35.28■■■■□ 3.24
EML3-204ENST00000419857 ABCA10Q8WWZ4 1543 aa35.27■■■■□ 3.24
EML3-204ENST00000419857 SYNJ1O43426 1573 aa35.26■■■■□ 3.24
EML3-204ENST00000419857 SYNJ2O15056 1496 aa35.26■■■■□ 3.23
EML3-204ENST00000419857 CHMP7Q8WUX9 453 aaPredicted RBP35.25■■■■□ 3.23
EML3-204ENST00000419857 PBRM1Q86U86 1689 aa35.24■■■■□ 3.23
EML3-204ENST00000419857 GAPVD1Q14C86 1478 aa35.24■■■■□ 3.23
EML3-204ENST00000419857 ABCA5Q8WWZ7 1642 aa35.21■■■■□ 3.23
EML3-204ENST00000419857 BIVM-ERCC5R4GMW8 1640 aa35.1■■■■□ 3.21
EML3-204ENST00000419857 WRNQ14191 1432 aaPredicted RBP eCLIP35.08■■■■□ 3.21
EML3-204ENST00000419857 TOP2BQ02880 1626 aa35.07■■■■□ 3.21
EML3-204ENST00000419857 ADAMTS12P58397 1594 aa34.92■■■■□ 3.18
EML3-204ENST00000419857 GRIN2AQ12879 1464 aa34.91■■■■□ 3.18
EML3-204ENST00000419857 TRHP20396 242 aaPredicted RBP34.84■■■■□ 3.17
EML3-204ENST00000419857 NUP160Q12769 1436 aa34.83■■■■□ 3.17
EML3-204ENST00000419857 ERICH3Q5RHP9 1530 aa34.83■■■■□ 3.17
EML3-204ENST00000419857 FHAD1B1AJZ9 1412 aa34.81■■■■□ 3.16
EML3-204ENST00000419857 CEP170Q5SW79 1584 aa34.78■■■■□ 3.16
EML3-204ENST00000419857 SHROOM2Q13796 1616 aa34.7■■■■□ 3.14
EML3-204ENST00000419857 ERCC6L2Q5T890 1561 aa34.66■■■■□ 3.14
EML3-204ENST00000419857 RUSC2Q8N2Y8 1516 aa34.42■■■■□ 3.1
EML3-204ENST00000419857 PRG4Q92954 1404 aaPredicted RBP34.41■■■■□ 3.1
EML3-204ENST00000419857 JPH4Q96JJ6 628 aa34.4■■■■□ 3.1
EML3-204ENST00000419857 KIF27Q86VH2 1401 aa34.36■■■■□ 3.09
Retrieved 100 of 20,778 RNA–protein pairs in 117.2 ms