RNA–Protein interactions for RNA: ENST00000419652.5

NR1H3-206, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 4

Gene NR1H3, Length 555 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-206ENST00000419652 NISCHQ9Y2I1 1504 aa38.04■■■■□ 3.68
NR1H3-206ENST00000419652 CCDC180Q9P1Z9 1646 aa33.9■■■■□ 3.02
NR1H3-206ENST00000419652 ABCC9O60706 1549 aa33.09■■■□□ 2.89
NR1H3-206ENST00000419652 RB1CC1Q8TDY2 1594 aa31.9■■■□□ 2.7
NR1H3-206ENST00000419652 NACADO15069 1562 aa31.84■■■□□ 2.69
NR1H3-206ENST00000419652 DCAF8L2P0C7V8 631 aa31.8■■■□□ 2.68
NR1H3-206ENST00000419652 ZCCHC6Q5VYS8 1495 aaKnown RBP31.72■■■□□ 2.67
NR1H3-206ENST00000419652 MYO15BQ96JP2 1530 aa31.63■■■□□ 2.65
NR1H3-206ENST00000419652 DCAF1Q9Y4B6 1507 aa31.49■■■□□ 2.63
NR1H3-206ENST00000419652 UNC13AQ9UPW8 1703 aa31.12■■■□□ 2.57
NR1H3-206ENST00000419652 SCRIBQ14160 1630 aa30.92■■■□□ 2.54
NR1H3-206ENST00000419652 PABPN1Q86U42 306 aaKnown RBP eCLIP30.87■■■□□ 2.53
NR1H3-206ENST00000419652 BICRAQ9NZM4 1560 aa30.82■■■□□ 2.52
NR1H3-206ENST00000419652 SHROOM4Q9ULL8 1493 aa30.63■■■□□ 2.49
NR1H3-206ENST00000419652 DNAJC5BQ9UF47 199 aa30.19■■■□□ 2.42
NR1H3-206ENST00000419652 EIF4G1Q04637 1599 aaKnown RBP30.07■■■□□ 2.4
NR1H3-206ENST00000419652 CC2D2AQ9P2K1 1620 aa29.94■■■□□ 2.38
NR1H3-206ENST00000419652 CECR2Q9BXF3 1484 aa29.74■■■□□ 2.35
NR1H3-206ENST00000419652 SMARCA4P51532 1647 aa29.56■■■□□ 2.32
NR1H3-206ENST00000419652 BAZ1AQ9NRL2 1556 aaPredicted RBP29.55■■■□□ 2.32
NR1H3-206ENST00000419652 SMARCA2P51531 1590 aa29.39■■■□□ 2.29
NR1H3-206ENST00000419652 ATAD2BQ9ULI0 1458 aa29.35■■■□□ 2.29
NR1H3-206ENST00000419652 NCAPD3P42695 1498 aa29.31■■■□□ 2.28
NR1H3-206ENST00000419652 MROH2BQ7Z745 1585 aa29.3■■■□□ 2.28
NR1H3-206ENST00000419652 HMGXB3Q12766 1538 aa29.25■■■□□ 2.27
NR1H3-206ENST00000419652 PEG3Q9GZU2 1588 aa29.24■■■□□ 2.27
NR1H3-206ENST00000419652 BAZ1BQ9UIG0 1483 aaKnown RBP29.17■■■□□ 2.26
NR1H3-206ENST00000419652 WIZO95785 1651 aa29.01■■■□□ 2.23
NR1H3-206ENST00000419652 RSF1Q96T23 1441 aaPredicted RBP28.96■■■□□ 2.23
NR1H3-206ENST00000419652 TOP2AP11388 1531 aaKnown RBP28.74■■■□□ 2.19
NR1H3-206ENST00000419652 LAMC3Q9Y6N6 1575 aa28.61■■■□□ 2.17
NR1H3-206ENST00000419652 ERCC6Q03468 1493 aa28.6■■■□□ 2.17
NR1H3-206ENST00000419652 NESP48681 1621 aa28.6■■■□□ 2.17
NR1H3-206ENST00000419652 CADPSQ9ULU8 1353 aa28.49■■■□□ 2.15
NR1H3-206ENST00000419652 PDS5BQ9NTI5 1447 aa28.42■■■□□ 2.14
NR1H3-206ENST00000419652 CCDC88BA6NC98 1476 aa28.34■■■□□ 2.13
NR1H3-206ENST00000419652 KIF21AQ7Z4S6 1674 aa28.32■■■□□ 2.12
NR1H3-206ENST00000419652 CFTRP13569 1480 aa28.31■■■□□ 2.12
NR1H3-206ENST00000419652 SUPT5HO00267 1087 aaKnown RBP28.28■■■□□ 2.12
NR1H3-206ENST00000419652 CUX2O14529 1486 aa28.25■■■□□ 2.11
NR1H3-206ENST00000419652 THOC2Q8NI27 1593 aaKnown RBP28.22■■■□□ 2.11
NR1H3-206ENST00000419652 PRDM2Q13029 1718 aa28.2■■■□□ 2.1
NR1H3-206ENST00000419652 FANCD2Q9BXW9 1451 aa28.19■■■□□ 2.1
NR1H3-206ENST00000419652 CEP164Q9UPV0 1460 aa28.18■■■□□ 2.1
NR1H3-206ENST00000419652 MRC2Q9UBG0 1479 aa28.13■■■□□ 2.09
NR1H3-206ENST00000419652 WDR62O43379 1518 aa28.02■■■□□ 2.08
NR1H3-206ENST00000419652 URB2Q14146 1524 aaKnown RBP27.87■■■□□ 2.05
NR1H3-206ENST00000419652 ABCC8Q09428 1581 aa27.77■■■□□ 2.04
NR1H3-206ENST00000419652 DNMBPQ6XZF7 1577 aa27.73■■■□□ 2.03
NR1H3-206ENST00000419652 TOPBP1Q92547 1522 aa27.72■■■□□ 2.03
NR1H3-206ENST00000419652 IFT140Q96RY7 1462 aa27.57■■■□□ 2
NR1H3-206ENST00000419652 CUX1P39880 1505 aa27.51■■□□□ 1.99
NR1H3-206ENST00000419652 POLA1P09884 1462 aaPredicted RBP27.48■■□□□ 1.99
NR1H3-206ENST00000419652 FGD5Q6ZNL6 1462 aa27.44■■□□□ 1.98
NR1H3-206ENST00000419652 TARBP1Q13395 1621 aaKnown RBP27.4■■□□□ 1.98
NR1H3-206ENST00000419652 ZNF608Q9ULD9 1512 aaPredicted RBP27.39■■□□□ 1.98
NR1H3-206ENST00000419652 SOGA1O94964 1423 aa27.37■■□□□ 1.97
NR1H3-206ENST00000419652 WRNQ14191 1432 aaPredicted RBP eCLIP27.37■■□□□ 1.97
NR1H3-206ENST00000419652 EIF4G3O43432 1585 aaKnown RBP27.36■■□□□ 1.97
NR1H3-206ENST00000419652 RAD54L2Q9Y4B4 1467 aa27.34■■□□□ 1.97
NR1H3-206ENST00000419652 TOP2BQ02880 1626 aa27.31■■□□□ 1.96
NR1H3-206ENST00000419652 BIVM-ERCC5R4GMW8 1640 aa27.31■■□□□ 1.96
NR1H3-206ENST00000419652 SYNJ1O43426 1573 aa27.29■■□□□ 1.96
NR1H3-206ENST00000419652 WDR97A6NE52 1622 aa27.27■■□□□ 1.96
NR1H3-206ENST00000419652 DNAJC5Q9H3Z4 198 aa27.26■■□□□ 1.95
NR1H3-206ENST00000419652 AQRO60306 1485 aaKnown RBP eCLIP27.24■■□□□ 1.957e-8■■■■□ 25.8
NR1H3-206ENST00000419652 TDRD9Q8NDG6 1382 aaKnown RBP27.2■■□□□ 1.94
NR1H3-206ENST00000419652 ABCA10Q8WWZ4 1543 aa27.16■■□□□ 1.94
NR1H3-206ENST00000419652 GRIN2BQ13224 1484 aa27.08■■□□□ 1.93
NR1H3-206ENST00000419652 GAPVD1Q14C86 1478 aa27.07■■□□□ 1.92
NR1H3-206ENST00000419652 ABCA5Q8WWZ7 1642 aa27.07■■□□□ 1.92
NR1H3-206ENST00000419652 PBRM1Q86U86 1689 aa27.06■■□□□ 1.92
NR1H3-206ENST00000419652 OSCARQ8IYS5 282 aa27.04■■□□□ 1.92
NR1H3-206ENST00000419652 SNAPC4Q5SXM2 1469 aa27.04■■□□□ 1.92
NR1H3-206ENST00000419652 MAGI1Q96QZ7 1491 aaPredicted RBP27.03■■□□□ 1.92
NR1H3-206ENST00000419652 CHD1O14646 1710 aa27.01■■□□□ 1.91
NR1H3-206ENST00000419652 FBLN2P98095 1184 aa26.97■■□□□ 1.91
NR1H3-206ENST00000419652 SYNJ2O15056 1496 aa26.91■■□□□ 1.9
NR1H3-206ENST00000419652 CHMP7Q8WUX9 453 aaPredicted RBP26.89■■□□□ 1.9
NR1H3-206ENST00000419652 ERICH3Q5RHP9 1530 aa26.87■■□□□ 1.89
NR1H3-206ENST00000419652 ADAMTS12P58397 1594 aa26.84■■□□□ 1.89
NR1H3-206ENST00000419652 KIF27Q86VH2 1401 aa26.82■■□□□ 1.88
NR1H3-206ENST00000419652 FHAD1B1AJZ9 1412 aa26.77■■□□□ 1.88
NR1H3-206ENST00000419652 TRIM41Q8WV44 630 aa26.73■■□□□ 1.87
NR1H3-206ENST00000419652 GRIN2AQ12879 1464 aa26.73■■□□□ 1.87
NR1H3-206ENST00000419652 CUL7Q14999 1698 aa26.68■■□□□ 1.86
NR1H3-206ENST00000419652 CLASP1Q7Z460 1538 aa26.68■■□□□ 1.86
NR1H3-206ENST00000419652 RIMBP3CA6NJZ7 1639 aa26.63■■□□□ 1.85
NR1H3-206ENST00000419652 RIMBP3BA6NNM3 1639 aa26.63■■□□□ 1.85
NR1H3-206ENST00000419652 RIMBP3Q9UFD9 1639 aa26.63■■□□□ 1.85
NR1H3-206ENST00000419652 ARHGEF11O15085 1522 aa26.63■■□□□ 1.85
NR1H3-206ENST00000419652 IGF1RP08069 1367 aa26.6■■□□□ 1.85
NR1H3-206ENST00000419652 NUP160Q12769 1436 aa26.58■■□□□ 1.85
NR1H3-206ENST00000419652 CEP170Q5SW79 1584 aa26.58■■□□□ 1.85
NR1H3-206ENST00000419652 CARMIL1Q5VZK9 1371 aa26.5■■□□□ 1.83
NR1H3-206ENST00000419652 RUSC2Q8N2Y8 1516 aa26.46■■□□□ 1.83
NR1H3-206ENST00000419652 SHROOM2Q13796 1616 aa26.39■■□□□ 1.82
NR1H3-206ENST00000419652 ARAP1Q96P48 1450 aa26.39■■□□□ 1.82
NR1H3-206ENST00000419652 RAPGEF2Q9Y4G8 1499 aa26.38■■□□□ 1.81
NR1H3-206ENST00000419652 KIAA0586Q9BVV6 1533 aa26.34■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 111.9 ms