RNA–Protein interactions for RNA: ENST00000419461.5

HLCS-203, Transcript of holocarboxylase synthetase, humanhuman

TSL 4

Gene HLCS, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-203ENST00000419461 NISCHQ9Y2I1 1504 aa50.19■■■■■ 5.62
HLCS-203ENST00000419461 CCDC180Q9P1Z9 1646 aa44.68■■■■■ 4.74
HLCS-203ENST00000419461 ABCC9O60706 1549 aa44.39■■■■■ 4.7
HLCS-203ENST00000419461 RB1CC1Q8TDY2 1594 aa42.33■■■■■ 4.37
HLCS-203ENST00000419461 DCAF8L2P0C7V8 631 aa42.23■■■■■ 4.35
HLCS-203ENST00000419461 NACADO15069 1562 aa42.17■■■■■ 4.34
HLCS-203ENST00000419461 MYO15BQ96JP2 1530 aa41.74■■■■■ 4.27
HLCS-203ENST00000419461 ZCCHC6Q5VYS8 1495 aaKnown RBP41.68■■■■■ 4.26
HLCS-203ENST00000419461 PABPN1Q86U42 306 aaKnown RBP eCLIP41.49■■■■■ 4.23
HLCS-203ENST00000419461 UNC13AQ9UPW8 1703 aa41.41■■■■■ 4.22
HLCS-203ENST00000419461 DCAF1Q9Y4B6 1507 aa41.41■■■■■ 4.22
HLCS-203ENST00000419461 DNAJC5BQ9UF47 199 aa41.35■■■■■ 4.21
HLCS-203ENST00000419461 BICRAQ9NZM4 1560 aa41.2■■■■■ 4.19
HLCS-203ENST00000419461 SCRIBQ14160 1630 aa40.87■■■■■ 4.13
HLCS-203ENST00000419461 SHROOM4Q9ULL8 1493 aa40.51■■■■■ 4.07
HLCS-203ENST00000419461 EIF4G1Q04637 1599 aaKnown RBP40.1■■■■■ 4.01
HLCS-203ENST00000419461 CC2D2AQ9P2K1 1620 aa40.06■■■■■ 4
HLCS-203ENST00000419461 CECR2Q9BXF3 1484 aa39.89■■■■□ 3.98
HLCS-203ENST00000419461 SMARCA4P51532 1647 aa39.01■■■■□ 3.84
HLCS-203ENST00000419461 NCAPD3P42695 1498 aa39■■■■□ 3.83
HLCS-203ENST00000419461 ATAD2BQ9ULI0 1458 aa38.98■■■■□ 3.83
HLCS-203ENST00000419461 BAZ1AQ9NRL2 1556 aaPredicted RBP38.85■■■■□ 3.81
HLCS-203ENST00000419461 SMARCA2P51531 1590 aa38.79■■■■□ 3.8
HLCS-203ENST00000419461 MROH2BQ7Z745 1585 aa38.74■■■■□ 3.79
HLCS-203ENST00000419461 HMGXB3Q12766 1538 aa38.68■■■■□ 3.78
HLCS-203ENST00000419461 PEG3Q9GZU2 1588 aa38.6■■■■□ 3.77
HLCS-203ENST00000419461 BAZ1BQ9UIG0 1483 aaKnown RBP38.57■■■■□ 3.76
HLCS-203ENST00000419461 NESP48681 1621 aa38.31■■■■□ 3.72
HLCS-203ENST00000419461 WIZO95785 1651 aa38.26■■■■□ 3.71
HLCS-203ENST00000419461 ERCC6Q03468 1493 aa38.2■■■■□ 3.71
HLCS-203ENST00000419461 RSF1Q96T23 1441 aaPredicted RBP38.12■■■■□ 3.69
HLCS-203ENST00000419461 LAMC3Q9Y6N6 1575 aa37.96■■■■□ 3.67
HLCS-203ENST00000419461 CUX2O14529 1486 aa37.93■■■■□ 3.66
HLCS-203ENST00000419461 CADPSQ9ULU8 1353 aa37.85■■■■□ 3.65
HLCS-203ENST00000419461 PDS5BQ9NTI5 1447 aa37.76■■■■□ 3.63
HLCS-203ENST00000419461 TOP2AP11388 1531 aaKnown RBP37.76■■■■□ 3.63
HLCS-203ENST00000419461 KIF21AQ7Z4S6 1674 aa37.72■■■■□ 3.63
HLCS-203ENST00000419461 THOC2Q8NI27 1593 aaKnown RBP37.72■■■■□ 3.63
HLCS-203ENST00000419461 CFTRP13569 1480 aa37.52■■■■□ 3.6
HLCS-203ENST00000419461 DNAJC5Q9H3Z4 198 aa37.48■■■■□ 3.59
HLCS-203ENST00000419461 MRC2Q9UBG0 1479 aa37.42■■■■□ 3.58
HLCS-203ENST00000419461 CCDC88BA6NC98 1476 aa37.41■■■■□ 3.58
HLCS-203ENST00000419461 FANCD2Q9BXW9 1451 aa37.4■■■■□ 3.58
HLCS-203ENST00000419461 CEP164Q9UPV0 1460 aa37.35■■■■□ 3.57
HLCS-203ENST00000419461 WDR62O43379 1518 aa37.31■■■■□ 3.56
HLCS-203ENST00000419461 URB2Q14146 1524 aaKnown RBP37.11■■■■□ 3.53
HLCS-203ENST00000419461 PRDM2Q13029 1718 aa37.02■■■■□ 3.52
HLCS-203ENST00000419461 SUPT5HO00267 1087 aaKnown RBP36.85■■■■□ 3.49
HLCS-203ENST00000419461 TOPBP1Q92547 1522 aa36.76■■■■□ 3.48
HLCS-203ENST00000419461 DNMBPQ6XZF7 1577 aa36.62■■■■□ 3.45
HLCS-203ENST00000419461 ABCC8Q09428 1581 aa36.61■■■■□ 3.45
HLCS-203ENST00000419461 ZNF608Q9ULD9 1512 aaPredicted RBP36.6■■■■□ 3.45
HLCS-203ENST00000419461 IFT140Q96RY7 1462 aa36.6■■■■□ 3.45
HLCS-203ENST00000419461 POLA1P09884 1462 aaPredicted RBP36.43■■■■□ 3.42
HLCS-203ENST00000419461 TARBP1Q13395 1621 aaKnown RBP36.39■■■■□ 3.42
HLCS-203ENST00000419461 OSCARQ8IYS5 282 aa36.36■■■■□ 3.41
HLCS-203ENST00000419461 RAD54L2Q9Y4B4 1467 aa36.35■■■■□ 3.41
HLCS-203ENST00000419461 CUX1P39880 1505 aa36.34■■■■□ 3.41
HLCS-203ENST00000419461 AQRO60306 1485 aaKnown RBP eCLIP36.34■■■■□ 3.41
HLCS-203ENST00000419461 EIF4G3O43432 1585 aaKnown RBP36.32■■■■□ 3.4
HLCS-203ENST00000419461 SOGA1O94964 1423 aa36.27■■■■□ 3.4
HLCS-203ENST00000419461 FGD5Q6ZNL6 1462 aa36.27■■■■□ 3.4
HLCS-203ENST00000419461 TDRD9Q8NDG6 1382 aaKnown RBP36.19■■■■□ 3.38
HLCS-203ENST00000419461 TRIM41Q8WV44 630 aa36.06■■■■□ 3.36
HLCS-203ENST00000419461 FBLN2P98095 1184 aa35.97■■■■□ 3.35
HLCS-203ENST00000419461 CHD1O14646 1710 aa35.94■■■■□ 3.34
HLCS-203ENST00000419461 WDR97A6NE52 1622 aa35.92■■■■□ 3.34
HLCS-203ENST00000419461 SNAPC4Q5SXM2 1469 aa35.92■■■■□ 3.34
HLCS-203ENST00000419461 WRNQ14191 1432 aaPredicted RBP eCLIP35.89■■■■□ 3.34
HLCS-203ENST00000419461 SYNJ1O43426 1573 aa35.86■■■■□ 3.33
HLCS-203ENST00000419461 ABCA10Q8WWZ4 1543 aa35.86■■■■□ 3.33
HLCS-203ENST00000419461 GRIN2BQ13224 1484 aa35.86■■■■□ 3.33
HLCS-203ENST00000419461 GAPVD1Q14C86 1478 aa35.82■■■■□ 3.32
HLCS-203ENST00000419461 TOP2BQ02880 1626 aa35.82■■■■□ 3.32
HLCS-203ENST00000419461 RIMBP3CA6NJZ7 1639 aa35.81■■■■□ 3.32
HLCS-203ENST00000419461 RIMBP3BA6NNM3 1639 aa35.81■■■■□ 3.32
HLCS-203ENST00000419461 RIMBP3Q9UFD9 1639 aa35.81■■■■□ 3.32
HLCS-203ENST00000419461 BIVM-ERCC5R4GMW8 1640 aa35.8■■■■□ 3.32
HLCS-203ENST00000419461 MAGI1Q96QZ7 1491 aaPredicted RBP35.78■■■■□ 3.32
HLCS-203ENST00000419461 ARHGEF11O15085 1522 aa35.76■■■■□ 3.31
HLCS-203ENST00000419461 CHMP7Q8WUX9 453 aaPredicted RBP35.75■■■■□ 3.31
HLCS-203ENST00000419461 ABCA5Q8WWZ7 1642 aa35.75■■■■□ 3.31
HLCS-203ENST00000419461 PBRM1Q86U86 1689 aa35.7■■■■□ 3.31
HLCS-203ENST00000419461 SYNJ2O15056 1496 aa35.67■■■■□ 3.3
HLCS-203ENST00000419461 CLASP1Q7Z460 1538 aa35.58■■■■□ 3.29
HLCS-203ENST00000419461 CYB5RLQ6IPT4 315 aa35.54■■■■□ 3.28
HLCS-203ENST00000419461 ARAP1Q96P48 1450 aa35.48■■■■□ 3.27
HLCS-203ENST00000419461 ADAMTS12P58397 1594 aa35.44■■■■□ 3.26
HLCS-203ENST00000419461 GRIN2AQ12879 1464 aa35.41■■■■□ 3.26
HLCS-203ENST00000419461 ERICH3Q5RHP9 1530 aa35.37■■■■□ 3.25
HLCS-203ENST00000419461 FHAD1B1AJZ9 1412 aa35.37■■■■□ 3.25
HLCS-203ENST00000419461 NUP160Q12769 1436 aa35.29■■■■□ 3.24
HLCS-203ENST00000419461 CEP170Q5SW79 1584 aa35.29■■■■□ 3.24
HLCS-203ENST00000419461 IGF1RP08069 1367 aa35.17■■■■□ 3.22
HLCS-203ENST00000419461 ERCC6L2Q5T890 1561 aa35.17■■■■□ 3.22
HLCS-203ENST00000419461 KIF27Q86VH2 1401 aa35.15■■■■□ 3.22
HLCS-203ENST00000419461 SHROOM2Q13796 1616 aa35.04■■■■□ 3.2
HLCS-203ENST00000419461 JPH4Q96JJ6 628 aa34.97■■■■□ 3.19
HLCS-203ENST00000419461 PRG4Q92954 1404 aaPredicted RBP34.93■■■■□ 3.18
HLCS-203ENST00000419461 TRHP20396 242 aaPredicted RBP34.93■■■■□ 3.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms