RNA–Protein interactions for RNA: ENST00000419193.6

CAPN8-203, Transcript of calpain 8, humanhuman

TSL 5

Gene CAPN8, Length 1,399 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN8-203ENST00000419193 NISCHQ9Y2I1 1504 aa31.43■■■□□ 2.62
CAPN8-203ENST00000419193 CCDC180Q9P1Z9 1646 aa28.05■■■□□ 2.08
CAPN8-203ENST00000419193 ABCC9O60706 1549 aa27.9■■■□□ 2.06
CAPN8-203ENST00000419193 RB1CC1Q8TDY2 1594 aa26.66■■□□□ 1.86
CAPN8-203ENST00000419193 DCAF8L2P0C7V8 631 aa26.62■■□□□ 1.85
CAPN8-203ENST00000419193 NACADO15069 1562 aa26.53■■□□□ 1.84
CAPN8-203ENST00000419193 MYO15BQ96JP2 1530 aa26.23■■□□□ 1.79
CAPN8-203ENST00000419193 ZCCHC6Q5VYS8 1495 aaKnown RBP26.07■■□□□ 1.76
CAPN8-203ENST00000419193 PABPN1Q86U42 306 aaKnown RBP eCLIP26.07■■□□□ 1.76
CAPN8-203ENST00000419193 DCAF1Q9Y4B6 1507 aa25.96■■□□□ 1.75
CAPN8-203ENST00000419193 DNAJC5BQ9UF47 199 aa25.93■■□□□ 1.74
CAPN8-203ENST00000419193 UNC13AQ9UPW8 1703 aa25.89■■□□□ 1.74
CAPN8-203ENST00000419193 BICRAQ9NZM4 1560 aa25.77■■□□□ 1.72
CAPN8-203ENST00000419193 SCRIBQ14160 1630 aa25.61■■□□□ 1.69
CAPN8-203ENST00000419193 SHROOM4Q9ULL8 1493 aa25.55■■□□□ 1.68
CAPN8-203ENST00000419193 EIF4G1Q04637 1599 aaKnown RBP25.18■■□□□ 1.62
CAPN8-203ENST00000419193 CC2D2AQ9P2K1 1620 aa25.17■■□□□ 1.62
CAPN8-203ENST00000419193 CECR2Q9BXF3 1484 aa25.13■■□□□ 1.61
CAPN8-203ENST00000419193 NCAPD3P42695 1498 aa24.5■■□□□ 1.51
CAPN8-203ENST00000419193 ATAD2BQ9ULI0 1458 aa24.44■■□□□ 1.5
CAPN8-203ENST00000419193 SMARCA4P51532 1647 aa24.44■■□□□ 1.5
CAPN8-203ENST00000419193 SMARCA2P51531 1590 aa24.41■■□□□ 1.5
CAPN8-203ENST00000419193 BAZ1AQ9NRL2 1556 aaPredicted RBP24.4■■□□□ 1.5
CAPN8-203ENST00000419193 HMGXB3Q12766 1538 aa24.3■■□□□ 1.48
CAPN8-203ENST00000419193 BAZ1BQ9UIG0 1483 aaKnown RBP24.25■■□□□ 1.47
CAPN8-203ENST00000419193 SUPT5HO00267 1087 aaKnown RBP24.22■■□□□ 1.47
CAPN8-203ENST00000419193 MROH2BQ7Z745 1585 aa24.2■■□□□ 1.46
CAPN8-203ENST00000419193 PEG3Q9GZU2 1588 aa24.19■■□□□ 1.46
CAPN8-203ENST00000419193 ERCC6Q03468 1493 aa24.15■■□□□ 1.46
CAPN8-203ENST00000419193 NESP48681 1621 aa23.99■■□□□ 1.43
CAPN8-203ENST00000419193 CUX2O14529 1486 aa23.97■■□□□ 1.43
CAPN8-203ENST00000419193 LAMC3Q9Y6N6 1575 aa23.9■■□□□ 1.42
CAPN8-203ENST00000419193 WIZO95785 1651 aa23.9■■□□□ 1.42
CAPN8-203ENST00000419193 RSF1Q96T23 1441 aaPredicted RBP23.84■■□□□ 1.41
CAPN8-203ENST00000419193 PDS5BQ9NTI5 1447 aa23.83■■□□□ 1.41
CAPN8-203ENST00000419193 CADPSQ9ULU8 1353 aa23.8■■□□□ 1.4
CAPN8-203ENST00000419193 DNAJC5Q9H3Z4 198 aa23.71■■□□□ 1.39
CAPN8-203ENST00000419193 TOP2AP11388 1531 aaKnown RBP23.65■■□□□ 1.38
CAPN8-203ENST00000419193 THOC2Q8NI27 1593 aaKnown RBP23.65■■□□□ 1.38
CAPN8-203ENST00000419193 KIF21AQ7Z4S6 1674 aa23.65■■□□□ 1.38
CAPN8-203ENST00000419193 MRC2Q9UBG0 1479 aa23.55■■□□□ 1.36
CAPN8-203ENST00000419193 CFTRP13569 1480 aa23.54■■□□□ 1.36
CAPN8-203ENST00000419193 CEP164Q9UPV0 1460 aa23.53■■□□□ 1.36
CAPN8-203ENST00000419193 FANCD2Q9BXW9 1451 aa23.51■■□□□ 1.35
CAPN8-203ENST00000419193 WDR62O43379 1518 aa23.44■■□□□ 1.34
CAPN8-203ENST00000419193 CCDC88BA6NC98 1476 aa23.4■■□□□ 1.34
CAPN8-203ENST00000419193 URB2Q14146 1524 aaKnown RBP23.24■■□□□ 1.31
CAPN8-203ENST00000419193 PRDM2Q13029 1718 aa23.21■■□□□ 1.31
CAPN8-203ENST00000419193 CHIC1Q5VXU3 224 aa23.12■■□□□ 1.29
CAPN8-203ENST00000419193 ABCC8Q09428 1581 aa23.11■■□□□ 1.29
CAPN8-203ENST00000419193 TOPBP1Q92547 1522 aa23.06■■□□□ 1.28
CAPN8-203ENST00000419193 IFT140Q96RY7 1462 aa23.05■■□□□ 1.28
CAPN8-203ENST00000419193 OSCARQ8IYS5 282 aa23.01■■□□□ 1.27
CAPN8-203ENST00000419193 DNMBPQ6XZF7 1577 aa22.99■■□□□ 1.27
CAPN8-203ENST00000419193 ZNF608Q9ULD9 1512 aaPredicted RBP22.92■■□□□ 1.26
CAPN8-203ENST00000419193 TRIM41Q8WV44 630 aa22.84■■□□□ 1.25
CAPN8-203ENST00000419193 POLA1P09884 1462 aaPredicted RBP22.84■■□□□ 1.25
CAPN8-203ENST00000419193 SOGA1O94964 1423 aa22.81■■□□□ 1.24
CAPN8-203ENST00000419193 AQRO60306 1485 aaKnown RBP eCLIP22.8■■□□□ 1.24
CAPN8-203ENST00000419193 EIF4G3O43432 1585 aaKnown RBP22.79■■□□□ 1.24
CAPN8-203ENST00000419193 TARBP1Q13395 1621 aaKnown RBP22.79■■□□□ 1.24
CAPN8-203ENST00000419193 RAD54L2Q9Y4B4 1467 aa22.76■■□□□ 1.23
CAPN8-203ENST00000419193 FGD5Q6ZNL6 1462 aa22.74■■□□□ 1.23
CAPN8-203ENST00000419193 FBLN2P98095 1184 aa22.72■■□□□ 1.23
CAPN8-203ENST00000419193 TDRD9Q8NDG6 1382 aaKnown RBP22.72■■□□□ 1.23
CAPN8-203ENST00000419193 CUX1P39880 1505 aa22.72■■□□□ 1.23
CAPN8-203ENST00000419193 WDR97A6NE52 1622 aa22.63■■□□□ 1.21
CAPN8-203ENST00000419193 CHMP7Q8WUX9 453 aaPredicted RBP22.59■■□□□ 1.21
CAPN8-203ENST00000419193 GRIN2BQ13224 1484 aa22.56■■□□□ 1.2
CAPN8-203ENST00000419193 SNAPC4Q5SXM2 1469 aa22.56■■□□□ 1.2
CAPN8-203ENST00000419193 CHD1O14646 1710 aa22.55■■□□□ 1.2
CAPN8-203ENST00000419193 WRNQ14191 1432 aaPredicted RBP eCLIP22.53■■□□□ 1.2
CAPN8-203ENST00000419193 RIMBP3CA6NJZ7 1639 aa22.53■■□□□ 1.2
CAPN8-203ENST00000419193 RIMBP3BA6NNM3 1639 aa22.53■■□□□ 1.2
CAPN8-203ENST00000419193 RIMBP3Q9UFD9 1639 aa22.53■■□□□ 1.2
CAPN8-203ENST00000419193 MAGI1Q96QZ7 1491 aaPredicted RBP22.52■■□□□ 1.2
CAPN8-203ENST00000419193 GAPVD1Q14C86 1478 aa22.52■■□□□ 1.19
CAPN8-203ENST00000419193 ARHGEF11O15085 1522 aa22.51■■□□□ 1.19
CAPN8-203ENST00000419193 ABCA10Q8WWZ4 1543 aa22.49■■□□□ 1.19
CAPN8-203ENST00000419193 SYNJ2O15056 1496 aa22.45■■□□□ 1.18
CAPN8-203ENST00000419193 CYB5RLQ6IPT4 315 aa22.44■■□□□ 1.18
CAPN8-203ENST00000419193 TOP2BQ02880 1626 aa22.43■■□□□ 1.18
CAPN8-203ENST00000419193 SYNJ1O43426 1573 aa22.41■■□□□ 1.18
CAPN8-203ENST00000419193 BIVM-ERCC5R4GMW8 1640 aa22.4■■□□□ 1.18
CAPN8-203ENST00000419193 FAM9AQ8IZU1 332 aaPredicted RBP22.39■■□□□ 1.18
CAPN8-203ENST00000419193 PBRM1Q86U86 1689 aa22.39■■□□□ 1.17
CAPN8-203ENST00000419193 ABCA5Q8WWZ7 1642 aa22.38■■□□□ 1.17
CAPN8-203ENST00000419193 CLASP1Q7Z460 1538 aa22.32■■□□□ 1.16
CAPN8-203ENST00000419193 ARAP1Q96P48 1450 aa22.28■■□□□ 1.16
CAPN8-203ENST00000419193 LOC105371045A0A1W2PR82 267 aa22.28■■□□□ 1.16
CAPN8-203ENST00000419193 FHAD1B1AJZ9 1412 aa22.25■■□□□ 1.15
CAPN8-203ENST00000419193 GRIN2AQ12879 1464 aa22.24■■□□□ 1.15
CAPN8-203ENST00000419193 ERICH3Q5RHP9 1530 aa22.23■■□□□ 1.15
CAPN8-203ENST00000419193 ADAMTS12P58397 1594 aa22.21■■□□□ 1.15
CAPN8-203ENST00000419193 TRHP20396 242 aaPredicted RBP22.17■■□□□ 1.14
CAPN8-203ENST00000419193 NUP160Q12769 1436 aa22.14■■□□□ 1.14
CAPN8-203ENST00000419193 EHMT2Q96KQ7 1210 aa22.12■■□□□ 1.13
CAPN8-203ENST00000419193 RUSC2Q8N2Y8 1516 aa22.11■■□□□ 1.13
CAPN8-203ENST00000419193 EEA1Q15075 1411 aa22.1■■□□□ 1.13
CAPN8-203ENST00000419193 KIF27Q86VH2 1401 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms