RNA–Protein interactions for RNA: ENST00000419113.5

NDUFA3-206, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 3

Gene NDUFA3, Length 654 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-206ENST00000419113 NISCHQ9Y2I1 1504 aa38.89■■■■□ 3.82
NDUFA3-206ENST00000419113 CCDC180Q9P1Z9 1646 aa34.44■■■■□ 3.1
NDUFA3-206ENST00000419113 ABCC9O60706 1549 aa33.04■■■□□ 2.88
NDUFA3-206ENST00000419113 ZCCHC6Q5VYS8 1495 aaKnown RBP32.51■■■□□ 2.79
NDUFA3-206ENST00000419113 DCAF1Q9Y4B6 1507 aa32.27■■■□□ 2.76
NDUFA3-206ENST00000419113 MYO15BQ96JP2 1530 aa32.23■■■□□ 2.75
NDUFA3-206ENST00000419113 NACADO15069 1562 aa32.23■■■□□ 2.75
NDUFA3-206ENST00000419113 DCAF8L2P0C7V8 631 aa32.19■■■□□ 2.74
NDUFA3-206ENST00000419113 RB1CC1Q8TDY2 1594 aa32.14■■■□□ 2.74
NDUFA3-206ENST00000419113 UNC13AQ9UPW8 1703 aa31.39■■■□□ 2.62
NDUFA3-206ENST00000419113 SCRIBQ14160 1630 aa31.35■■■□□ 2.61
NDUFA3-206ENST00000419113 BICRAQ9NZM4 1560 aa31.05■■■□□ 2.56
NDUFA3-206ENST00000419113 SHROOM4Q9ULL8 1493 aa30.93■■■□□ 2.54
NDUFA3-206ENST00000419113 PABPN1Q86U42 306 aaKnown RBP eCLIP30.91■■■□□ 2.54
NDUFA3-206ENST00000419113 EIF4G1Q04637 1599 aaKnown RBP30.23■■■□□ 2.43
NDUFA3-206ENST00000419113 BAZ1AQ9NRL2 1556 aaPredicted RBP30.15■■■□□ 2.42
NDUFA3-206ENST00000419113 CECR2Q9BXF3 1484 aa30.15■■■□□ 2.42
NDUFA3-206ENST00000419113 SMARCA4P51532 1647 aa30.08■■■□□ 2.41
NDUFA3-206ENST00000419113 CC2D2AQ9P2K1 1620 aa29.96■■■□□ 2.39
NDUFA3-206ENST00000419113 MROH2BQ7Z745 1585 aa29.93■■■□□ 2.38
NDUFA3-206ENST00000419113 SMARCA2P51531 1590 aa29.81■■■□□ 2.36
NDUFA3-206ENST00000419113 PEG3Q9GZU2 1588 aa29.81■■■□□ 2.36
NDUFA3-206ENST00000419113 RSF1Q96T23 1441 aaPredicted RBP29.79■■■□□ 2.36
NDUFA3-206ENST00000419113 ATAD2BQ9ULI0 1458 aa29.75■■■□□ 2.35
NDUFA3-206ENST00000419113 DNAJC5BQ9UF47 199 aa29.75■■■□□ 2.35
NDUFA3-206ENST00000419113 NCAPD3P42695 1498 aa29.68■■■□□ 2.34
NDUFA3-206ENST00000419113 WIZO95785 1651 aa29.66■■■□□ 2.34
NDUFA3-206ENST00000419113 HMGXB3Q12766 1538 aa29.63■■■□□ 2.33
NDUFA3-206ENST00000419113 BAZ1BQ9UIG0 1483 aaKnown RBP29.57■■■□□ 2.32
NDUFA3-206ENST00000419113 TOP2AP11388 1531 aaKnown RBP29.42■■■□□ 2.3
NDUFA3-206ENST00000419113 SUPT5HO00267 1087 aaKnown RBP29.37■■■□□ 2.29
NDUFA3-206ENST00000419113 CCDC88BA6NC98 1476 aa29.01■■■□□ 2.23
NDUFA3-206ENST00000419113 LAMC3Q9Y6N6 1575 aa28.88■■■□□ 2.21
NDUFA3-206ENST00000419113 CADPSQ9ULU8 1353 aa28.83■■■□□ 2.21
NDUFA3-206ENST00000419113 CFTRP13569 1480 aa28.78■■■□□ 2.2
NDUFA3-206ENST00000419113 NESP48681 1621 aa28.72■■■□□ 2.19
NDUFA3-206ENST00000419113 PRDM2Q13029 1718 aa28.72■■■□□ 2.19
NDUFA3-206ENST00000419113 PDS5BQ9NTI5 1447 aa28.63■■■□□ 2.17
NDUFA3-206ENST00000419113 ERCC6Q03468 1493 aa28.51■■■□□ 2.15
NDUFA3-206ENST00000419113 FANCD2Q9BXW9 1451 aa28.5■■■□□ 2.15
NDUFA3-206ENST00000419113 KIF21AQ7Z4S6 1674 aa28.49■■■□□ 2.15
NDUFA3-206ENST00000419113 CEP164Q9UPV0 1460 aa28.45■■■□□ 2.14
NDUFA3-206ENST00000419113 MRC2Q9UBG0 1479 aa28.28■■■□□ 2.12
NDUFA3-206ENST00000419113 THOC2Q8NI27 1593 aaKnown RBP28.26■■■□□ 2.11
NDUFA3-206ENST00000419113 ABCC8Q09428 1581 aa28.23■■■□□ 2.11
NDUFA3-206ENST00000419113 WDR62O43379 1518 aa28.18■■■□□ 2.1
NDUFA3-206ENST00000419113 DNMBPQ6XZF7 1577 aa28.16■■■□□ 2.1
NDUFA3-206ENST00000419113 URB2Q14146 1524 aaKnown RBP28.15■■■□□ 2.1
NDUFA3-206ENST00000419113 TOPBP1Q92547 1522 aa28.11■■■□□ 2.09
NDUFA3-206ENST00000419113 WRNQ14191 1432 aaPredicted RBP eCLIP28.1■■■□□ 2.091e-6■■■■■ 58.5
NDUFA3-206ENST00000419113 CUX1P39880 1505 aa28.06■■■□□ 2.08
NDUFA3-206ENST00000419113 CUX2O14529 1486 aa28.05■■■□□ 2.08
NDUFA3-206ENST00000419113 BIVM-ERCC5R4GMW8 1640 aa28.03■■■□□ 2.08
NDUFA3-206ENST00000419113 TOP2BQ02880 1626 aa28.02■■■□□ 2.08
NDUFA3-206ENST00000419113 SYNJ1O43426 1573 aa27.98■■■□□ 2.07
NDUFA3-206ENST00000419113 FGD5Q6ZNL6 1462 aa27.9■■■□□ 2.06
NDUFA3-206ENST00000419113 POLA1P09884 1462 aaPredicted RBP27.89■■■□□ 2.06
NDUFA3-206ENST00000419113 IFT140Q96RY7 1462 aa27.83■■■□□ 2.05
NDUFA3-206ENST00000419113 SOGA1O94964 1423 aa27.79■■■□□ 2.04
NDUFA3-206ENST00000419113 TRIM41Q8WV44 630 aa27.78■■■□□ 2.04
NDUFA3-206ENST00000419113 TARBP1Q13395 1621 aaKnown RBP27.77■■■□□ 2.04
NDUFA3-206ENST00000419113 CHIC1Q5VXU3 224 aa27.73■■■□□ 2.03
NDUFA3-206ENST00000419113 RAD54L2Q9Y4B4 1467 aa27.71■■■□□ 2.03
NDUFA3-206ENST00000419113 WDR97A6NE52 1622 aa27.7■■■□□ 2.02
NDUFA3-206ENST00000419113 ABCA10Q8WWZ4 1543 aa27.69■■■□□ 2.02
NDUFA3-206ENST00000419113 ZNF608Q9ULD9 1512 aaPredicted RBP27.57■■■□□ 2
NDUFA3-206ENST00000419113 EIF4G3O43432 1585 aaKnown RBP27.56■■■□□ 2
NDUFA3-206ENST00000419113 ABCA5Q8WWZ7 1642 aa27.53■■■□□ 2
NDUFA3-206ENST00000419113 TDRD9Q8NDG6 1382 aaKnown RBP27.51■■□□□ 1.99
NDUFA3-206ENST00000419113 KIF27Q86VH2 1401 aa27.5■■□□□ 1.99
NDUFA3-206ENST00000419113 GAPVD1Q14C86 1478 aa27.5■■□□□ 1.99
NDUFA3-206ENST00000419113 AQRO60306 1485 aaKnown RBP eCLIP27.49■■□□□ 1.99
NDUFA3-206ENST00000419113 PBRM1Q86U86 1689 aa27.45■■□□□ 1.98
NDUFA3-206ENST00000419113 GRIN2BQ13224 1484 aa27.44■■□□□ 1.98
NDUFA3-206ENST00000419113 ERICH3Q5RHP9 1530 aa27.4■■□□□ 1.98
NDUFA3-206ENST00000419113 EEA1Q15075 1411 aa27.38■■□□□ 1.97
NDUFA3-206ENST00000419113 MAGI1Q96QZ7 1491 aaPredicted RBP27.33■■□□□ 1.97
NDUFA3-206ENST00000419113 SNAPC4Q5SXM2 1469 aa27.29■■□□□ 1.96
NDUFA3-206ENST00000419113 RUSC2Q8N2Y8 1516 aa27.29■■□□□ 1.96
NDUFA3-206ENST00000419113 CUL7Q14999 1698 aa27.28■■□□□ 1.96
NDUFA3-206ENST00000419113 IGF1RP08069 1367 aa27.25■■□□□ 1.95
NDUFA3-206ENST00000419113 ADAMTS12P58397 1594 aa27.23■■□□□ 1.95
NDUFA3-206ENST00000419113 FHAD1B1AJZ9 1412 aa27.21■■□□□ 1.95
NDUFA3-206ENST00000419113 SYNJ2O15056 1496 aa27.19■■□□□ 1.94
NDUFA3-206ENST00000419113 CSRNP3Q8WYN3 585 aa27.17■■□□□ 1.94
NDUFA3-206ENST00000419113 CARMIL1Q5VZK9 1371 aa27.14■■□□□ 1.94
NDUFA3-206ENST00000419113 CHD1O14646 1710 aa27.13■■□□□ 1.93
NDUFA3-206ENST00000419113 CHMP7Q8WUX9 453 aaPredicted RBP27.12■■□□□ 1.93
NDUFA3-206ENST00000419113 FAM9AQ8IZU1 332 aaPredicted RBP27.1■■□□□ 1.93
NDUFA3-206ENST00000419113 GRIN2AQ12879 1464 aa27.07■■□□□ 1.92
NDUFA3-206ENST00000419113 PRXQ9BXM0 1461 aa27.07■■□□□ 1.92
NDUFA3-206ENST00000419113 RAPGEF2Q9Y4G8 1499 aa27.06■■□□□ 1.92
NDUFA3-206ENST00000419113 FBLN2P98095 1184 aa27.06■■□□□ 1.92
NDUFA3-206ENST00000419113 KIF21BO75037 1637 aa27.02■■□□□ 1.92
NDUFA3-206ENST00000419113 OSCARQ8IYS5 282 aa26.94■■□□□ 1.9
NDUFA3-206ENST00000419113 NUP160Q12769 1436 aa26.92■■□□□ 1.9
NDUFA3-206ENST00000419113 GOLGA3Q08378 1498 aa26.89■■□□□ 1.9
NDUFA3-206ENST00000419113 CEP170Q5SW79 1584 aa26.88■■□□□ 1.89
NDUFA3-206ENST00000419113 CTTNBP2Q8WZ74 1663 aa26.85■■□□□ 1.89
NDUFA3-206ENST00000419113 CLASP1Q7Z460 1538 aa26.83■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms