RNA–Protein interactions for RNA: ENST00000419106.5

VSTM1-204, Transcript of V-set and transmembrane domain containing 1, humanhuman

TSL 2

Gene VSTM1, Length 517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM1-204ENST00000419106 NISCHQ9Y2I1 1504 aa19.3■□□□□ 0.68
VSTM1-204ENST00000419106 CCDC180Q9P1Z9 1646 aa17.25■□□□□ 0.35
VSTM1-204ENST00000419106 ABCC9O60706 1549 aa17.11■□□□□ 0.33
VSTM1-204ENST00000419106 RB1CC1Q8TDY2 1594 aa16.34■□□□□ 0.21
VSTM1-204ENST00000419106 NACADO15069 1562 aa16.26■□□□□ 0.19
VSTM1-204ENST00000419106 DCAF8L2P0C7V8 631 aa16.16■□□□□ 0.18
VSTM1-204ENST00000419106 MYO15BQ96JP2 1530 aa16.09■□□□□ 0.17
VSTM1-204ENST00000419106 ZCCHC6Q5VYS8 1495 aaKnown RBP16.03■□□□□ 0.16
VSTM1-204ENST00000419106 UNC13AQ9UPW8 1703 aa16.01■□□□□ 0.15
VSTM1-204ENST00000419106 DCAF1Q9Y4B6 1507 aa15.94■□□□□ 0.14
VSTM1-204ENST00000419106 PABPN1Q86U42 306 aaKnown RBP eCLIP15.94■□□□□ 0.14
VSTM1-204ENST00000419106 DNAJC5BQ9UF47 199 aa15.93■□□□□ 0.14
VSTM1-204ENST00000419106 BICRAQ9NZM4 1560 aa15.9■□□□□ 0.14
VSTM1-204ENST00000419106 SCRIBQ14160 1630 aa15.74■□□□□ 0.11
VSTM1-204ENST00000419106 SHROOM4Q9ULL8 1493 aa15.66■□□□□ 0.1
VSTM1-204ENST00000419106 EIF4G1Q04637 1599 aaKnown RBP15.48■□□□□ 0.07
VSTM1-204ENST00000419106 CC2D2AQ9P2K1 1620 aa15.47■□□□□ 0.07
VSTM1-204ENST00000419106 CECR2Q9BXF3 1484 aa15.4■□□□□ 0.06
VSTM1-204ENST00000419106 SMARCA4P51532 1647 aa15.03■□□□□ -0
VSTM1-204ENST00000419106 NCAPD3P42695 1498 aa15.01□□□□□ -0.01
VSTM1-204ENST00000419106 ATAD2BQ9ULI0 1458 aa15□□□□□ -0.01
VSTM1-204ENST00000419106 BAZ1AQ9NRL2 1556 aaPredicted RBP14.96□□□□□ -0.01
VSTM1-204ENST00000419106 SMARCA2P51531 1590 aa14.94□□□□□ -0.02
VSTM1-204ENST00000419106 HMGXB3Q12766 1538 aa14.93□□□□□ -0.02
VSTM1-204ENST00000419106 PEG3Q9GZU2 1588 aa14.89□□□□□ -0.03
VSTM1-204ENST00000419106 MROH2BQ7Z745 1585 aa14.88□□□□□ -0.03
VSTM1-204ENST00000419106 BAZ1BQ9UIG0 1483 aaKnown RBP14.85□□□□□ -0.03
VSTM1-204ENST00000419106 NESP48681 1621 aa14.76□□□□□ -0.05
VSTM1-204ENST00000419106 ERCC6Q03468 1493 aa14.74□□□□□ -0.05
VSTM1-204ENST00000419106 WIZO95785 1651 aa14.71□□□□□ -0.06
VSTM1-204ENST00000419106 CUX2O14529 1486 aa14.68□□□□□ -0.06
VSTM1-204ENST00000419106 LAMC3Q9Y6N6 1575 aa14.65□□□□□ -0.06
VSTM1-204ENST00000419106 RSF1Q96T23 1441 aaPredicted RBP14.61□□□□□ -0.07
VSTM1-204ENST00000419106 THOC2Q8NI27 1593 aaKnown RBP14.59□□□□□ -0.07
VSTM1-204ENST00000419106 KIF21AQ7Z4S6 1674 aa14.57□□□□□ -0.08
VSTM1-204ENST00000419106 CADPSQ9ULU8 1353 aa14.56□□□□□ -0.08
VSTM1-204ENST00000419106 PDS5BQ9NTI5 1447 aa14.54□□□□□ -0.08
VSTM1-204ENST00000419106 TOP2AP11388 1531 aaKnown RBP14.53□□□□□ -0.08
VSTM1-204ENST00000419106 DNAJC5Q9H3Z4 198 aa14.49□□□□□ -0.09
VSTM1-204ENST00000419106 CFTRP13569 1480 aa14.44□□□□□ -0.1
VSTM1-204ENST00000419106 MRC2Q9UBG0 1479 aa14.44□□□□□ -0.1
VSTM1-204ENST00000419106 WDR62O43379 1518 aa14.41□□□□□ -0.1
VSTM1-204ENST00000419106 FANCD2Q9BXW9 1451 aa14.4□□□□□ -0.1
VSTM1-204ENST00000419106 CEP164Q9UPV0 1460 aa14.39□□□□□ -0.11
VSTM1-204ENST00000419106 CCDC88BA6NC98 1476 aa14.36□□□□□ -0.11
VSTM1-204ENST00000419106 PRDM2Q13029 1718 aa14.32□□□□□ -0.12
VSTM1-204ENST00000419106 URB2Q14146 1524 aaKnown RBP14.3□□□□□ -0.12
VSTM1-204ENST00000419106 TOPBP1Q92547 1522 aa14.15□□□□□ -0.14
VSTM1-204ENST00000419106 DNMBPQ6XZF7 1577 aa14.11□□□□□ -0.15
VSTM1-204ENST00000419106 IFT140Q96RY7 1462 aa14.11□□□□□ -0.15
VSTM1-204ENST00000419106 ZNF608Q9ULD9 1512 aaPredicted RBP14.1□□□□□ -0.15
VSTM1-204ENST00000419106 ABCC8Q09428 1581 aa14.09□□□□□ -0.15
VSTM1-204ENST00000419106 SUPT5HO00267 1087 aaKnown RBP14.03□□□□□ -0.16
VSTM1-204ENST00000419106 EIF4G3O43432 1585 aaKnown RBP14.03□□□□□ -0.16
VSTM1-204ENST00000419106 TARBP1Q13395 1621 aaKnown RBP14.03□□□□□ -0.16
VSTM1-204ENST00000419106 POLA1P09884 1462 aaPredicted RBP14.02□□□□□ -0.16
VSTM1-204ENST00000419106 OSCARQ8IYS5 282 aa13.99□□□□□ -0.17
VSTM1-204ENST00000419106 CUX1P39880 1505 aa13.97□□□□□ -0.17
VSTM1-204ENST00000419106 AQRO60306 1485 aaKnown RBP eCLIP13.97□□□□□ -0.17
VSTM1-204ENST00000419106 RAD54L2Q9Y4B4 1467 aa13.97□□□□□ -0.17
VSTM1-204ENST00000419106 FGD5Q6ZNL6 1462 aa13.95□□□□□ -0.18
VSTM1-204ENST00000419106 SOGA1O94964 1423 aa13.93□□□□□ -0.18
VSTM1-204ENST00000419106 TRIM41Q8WV44 630 aa13.9□□□□□ -0.18
VSTM1-204ENST00000419106 TDRD9Q8NDG6 1382 aaKnown RBP13.9□□□□□ -0.18
VSTM1-204ENST00000419106 CHD1O14646 1710 aa13.89□□□□□ -0.19
VSTM1-204ENST00000419106 WDR97A6NE52 1622 aa13.87□□□□□ -0.19
VSTM1-204ENST00000419106 RIMBP3CA6NJZ7 1639 aa13.85□□□□□ -0.19
VSTM1-204ENST00000419106 RIMBP3BA6NNM3 1639 aa13.85□□□□□ -0.19
VSTM1-204ENST00000419106 RIMBP3Q9UFD9 1639 aa13.85□□□□□ -0.19
VSTM1-204ENST00000419106 SNAPC4Q5SXM2 1469 aa13.84□□□□□ -0.19
VSTM1-204ENST00000419106 ARHGEF11O15085 1522 aa13.82□□□□□ -0.2
VSTM1-204ENST00000419106 ABCA10Q8WWZ4 1543 aa13.8□□□□□ -0.2
VSTM1-204ENST00000419106 FBLN2P98095 1184 aa13.8□□□□□ -0.2
VSTM1-204ENST00000419106 GRIN2BQ13224 1484 aa13.8□□□□□ -0.2
VSTM1-204ENST00000419106 SYNJ1O43426 1573 aa13.79□□□□□ -0.2
VSTM1-204ENST00000419106 MAGI1Q96QZ7 1491 aaPredicted RBP13.79□□□□□ -0.2
VSTM1-204ENST00000419106 TOP2BQ02880 1626 aa13.79□□□□□ -0.2
VSTM1-204ENST00000419106 ABCA5Q8WWZ7 1642 aa13.79□□□□□ -0.2
VSTM1-204ENST00000419106 BIVM-ERCC5R4GMW8 1640 aa13.79□□□□□ -0.2
VSTM1-204ENST00000419106 PBRM1Q86U86 1689 aa13.79□□□□□ -0.2
VSTM1-204ENST00000419106 WRNQ14191 1432 aaPredicted RBP eCLIP13.77□□□□□ -0.21
VSTM1-204ENST00000419106 GAPVD1Q14C86 1478 aa13.77□□□□□ -0.21
VSTM1-204ENST00000419106 CLASP1Q7Z460 1538 aa13.74□□□□□ -0.21
VSTM1-204ENST00000419106 SYNJ2O15056 1496 aa13.74□□□□□ -0.21
VSTM1-204ENST00000419106 CHMP7Q8WUX9 453 aaPredicted RBP13.72□□□□□ -0.21
VSTM1-204ENST00000419106 ARAP1Q96P48 1450 aa13.7□□□□□ -0.22
VSTM1-204ENST00000419106 ADAMTS12P58397 1594 aa13.67□□□□□ -0.22
VSTM1-204ENST00000419106 CYB5RLQ6IPT4 315 aa13.66□□□□□ -0.22
VSTM1-204ENST00000419106 GRIN2AQ12879 1464 aa13.64□□□□□ -0.23
VSTM1-204ENST00000419106 ERICH3Q5RHP9 1530 aa13.62□□□□□ -0.23
VSTM1-204ENST00000419106 FHAD1B1AJZ9 1412 aa13.6□□□□□ -0.23
VSTM1-204ENST00000419106 CEP170Q5SW79 1584 aa13.6□□□□□ -0.23
VSTM1-204ENST00000419106 NUP160Q12769 1436 aa13.59□□□□□ -0.23
VSTM1-204ENST00000419106 ERCC6L2Q5T890 1561 aa13.55□□□□□ -0.24
VSTM1-204ENST00000419106 SHROOM2Q13796 1616 aa13.53□□□□□ -0.24
VSTM1-204ENST00000419106 KIF27Q86VH2 1401 aa13.48□□□□□ -0.25
VSTM1-204ENST00000419106 IGF1RP08069 1367 aa13.48□□□□□ -0.25
VSTM1-204ENST00000419106 RUSC2Q8N2Y8 1516 aa13.48□□□□□ -0.25
VSTM1-204ENST00000419106 CUL7Q14999 1698 aa13.46□□□□□ -0.26
VSTM1-204ENST00000419106 TRHP20396 242 aaPredicted RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms