RNA–Protein interactions for RNA: ENST00000419073.1

LST1-215, leukocyte specific transcript 1, humanhuman

TSL 3

Gene LST1, Length 259 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LST1-215ENST00000419073 NISCHQ9Y2I1 1504 aa38.84■■■■□ 3.81
LST1-215ENST00000419073 ABCC9O60706 1549 aa36.03■■■■□ 3.36
LST1-215ENST00000419073 CCDC180Q9P1Z9 1646 aa35.04■■■■□ 3.2
LST1-215ENST00000419073 DNAJC5BQ9UF47 199 aa34.56■■■■□ 3.12
LST1-215ENST00000419073 RB1CC1Q8TDY2 1594 aa33.85■■■■□ 3.01
LST1-215ENST00000419073 PABPN1Q86U42 306 aaKnown RBP eCLIP33.54■■■□□ 2.96
LST1-215ENST00000419073 DCAF8L2P0C7V8 631 aa33.43■■■□□ 2.94
LST1-215ENST00000419073 NACADO15069 1562 aa33.43■■■□□ 2.94
LST1-215ENST00000419073 UNC13AQ9UPW8 1703 aa32.91■■■□□ 2.86
LST1-215ENST00000419073 BICRAQ9NZM4 1560 aa32.84■■■□□ 2.85
LST1-215ENST00000419073 MYO15BQ96JP2 1530 aa32.67■■■□□ 2.82
LST1-215ENST00000419073 CECR2Q9BXF3 1484 aa32.54■■■□□ 2.8
LST1-215ENST00000419073 CC2D2AQ9P2K1 1620 aa32.41■■■□□ 2.78
LST1-215ENST00000419073 DNAJC5Q9H3Z4 198 aa32.33■■■□□ 2.77
LST1-215ENST00000419073 SHROOM4Q9ULL8 1493 aa32.32■■■□□ 2.76
LST1-215ENST00000419073 EIF4G1Q04637 1599 aaKnown RBP32.15■■■□□ 2.74
LST1-215ENST00000419073 SCRIBQ14160 1630 aa32■■■□□ 2.71
LST1-215ENST00000419073 ZCCHC6Q5VYS8 1495 aaKnown RBP31.97■■■□□ 2.71
LST1-215ENST00000419073 DCAF1Q9Y4B6 1507 aa31.96■■■□□ 2.71
LST1-215ENST00000419073 CUX2O14529 1486 aa31.32■■■□□ 2.6
LST1-215ENST00000419073 ERCC6Q03468 1493 aa31.2■■■□□ 2.58
LST1-215ENST00000419073 NCAPD3P42695 1498 aa30.93■■■□□ 2.54
LST1-215ENST00000419073 ATAD2BQ9ULI0 1458 aa30.72■■■□□ 2.51
LST1-215ENST00000419073 NESP48681 1621 aa30.69■■■□□ 2.5
LST1-215ENST00000419073 TRIM41Q8WV44 630 aa30.67■■■□□ 2.5
LST1-215ENST00000419073 SMARCA2P51531 1590 aa30.55■■■□□ 2.48
LST1-215ENST00000419073 HMGXB3Q12766 1538 aa30.53■■■□□ 2.48
LST1-215ENST00000419073 THOC2Q8NI27 1593 aaKnown RBP30.41■■■□□ 2.46
LST1-215ENST00000419073 SMARCA4P51532 1647 aa30.4■■■□□ 2.46
LST1-215ENST00000419073 BAZ1BQ9UIG0 1483 aaKnown RBP30.39■■■□□ 2.46
LST1-215ENST00000419073 LAMC3Q9Y6N6 1575 aa30.28■■■□□ 2.44
LST1-215ENST00000419073 PDS5BQ9NTI5 1447 aa30.27■■■□□ 2.44
LST1-215ENST00000419073 BAZ1AQ9NRL2 1556 aaPredicted RBP30.18■■■□□ 2.42
LST1-215ENST00000419073 KIF21AQ7Z4S6 1674 aa30.14■■■□□ 2.41
LST1-215ENST00000419073 PEG3Q9GZU2 1588 aa30.08■■■□□ 2.41
LST1-215ENST00000419073 CADPSQ9ULU8 1353 aa30■■■□□ 2.39
LST1-215ENST00000419073 MRC2Q9UBG0 1479 aa29.99■■■□□ 2.39
LST1-215ENST00000419073 OSCARQ8IYS5 282 aa29.93■■■□□ 2.38
LST1-215ENST00000419073 MROH2BQ7Z745 1585 aa29.92■■■□□ 2.38
LST1-215ENST00000419073 WDR62O43379 1518 aa29.87■■■□□ 2.37
LST1-215ENST00000419073 CEP164Q9UPV0 1460 aa29.71■■■□□ 2.35
LST1-215ENST00000419073 FANCD2Q9BXW9 1451 aa29.63■■■□□ 2.33
LST1-215ENST00000419073 WIZO95785 1651 aa29.47■■■□□ 2.31
LST1-215ENST00000419073 CFTRP13569 1480 aa29.43■■■□□ 2.3
LST1-215ENST00000419073 RIMBP3CA6NJZ7 1639 aa29.42■■■□□ 2.3
LST1-215ENST00000419073 RIMBP3BA6NNM3 1639 aa29.42■■■□□ 2.3
LST1-215ENST00000419073 RIMBP3Q9UFD9 1639 aa29.42■■■□□ 2.3
LST1-215ENST00000419073 URB2Q14146 1524 aaKnown RBP29.4■■■□□ 2.3
LST1-215ENST00000419073 CYB5RLQ6IPT4 315 aa29.31■■■□□ 2.28
LST1-215ENST00000419073 TRHP20396 242 aaPredicted RBP29.28■■■□□ 2.28
LST1-215ENST00000419073 ARHGEF11O15085 1522 aa29.28■■■□□ 2.28
LST1-215ENST00000419073 ZNF608Q9ULD9 1512 aaPredicted RBP29.2■■■□□ 2.26
LST1-215ENST00000419073 IFT140Q96RY7 1462 aa29.17■■■□□ 2.26
LST1-215ENST00000419073 TOP2AP11388 1531 aaKnown RBP29.06■■■□□ 2.24
LST1-215ENST00000419073 RSF1Q96T23 1441 aaPredicted RBP29.06■■■□□ 2.24
LST1-215ENST00000419073 AEBP2Q6ZN18 517 aaPredicted RBP29.02■■■□□ 2.24
LST1-215ENST00000419073 FBLN2P98095 1184 aa29■■■□□ 2.23
LST1-215ENST00000419073 TOPBP1Q92547 1522 aa28.94■■■□□ 2.22
LST1-215ENST00000419073 ARAP1Q96P48 1450 aa28.94■■■□□ 2.22
LST1-215ENST00000419073 EIF4G3O43432 1585 aaKnown RBP28.89■■■□□ 2.22
LST1-215ENST00000419073 AQRO60306 1485 aaKnown RBP eCLIP28.89■■■□□ 2.22
LST1-215ENST00000419073 ABCC8Q09428 1581 aa28.86■■■□□ 2.21
LST1-215ENST00000419073 PRDM2Q13029 1718 aa28.83■■■□□ 2.21
LST1-215ENST00000419073 CCDC88BA6NC98 1476 aa28.83■■■□□ 2.21
LST1-215ENST00000419073 CHD1O14646 1710 aa28.78■■■□□ 2.2
LST1-215ENST00000419073 DNMBPQ6XZF7 1577 aa28.73■■■□□ 2.19
LST1-215ENST00000419073 TARBP1Q13395 1621 aaKnown RBP28.68■■■□□ 2.18
LST1-215ENST00000419073 TDRD9Q8NDG6 1382 aaKnown RBP28.62■■■□□ 2.17
LST1-215ENST00000419073 CHMP7Q8WUX9 453 aaPredicted RBP28.61■■■□□ 2.17
LST1-215ENST00000419073 POLA1P09884 1462 aaPredicted RBP28.59■■■□□ 2.17
LST1-215ENST00000419073 RAD54L2Q9Y4B4 1467 aa28.57■■■□□ 2.16
LST1-215ENST00000419073 SOGA1O94964 1423 aa28.55■■■□□ 2.16
LST1-215ENST00000419073 SNAPC4Q5SXM2 1469 aa28.51■■■□□ 2.15
LST1-215ENST00000419073 CLASP1Q7Z460 1538 aa28.48■■■□□ 2.15
LST1-215ENST00000419073 SYNJ1O43426 1573 aa28.45■■■□□ 2.14
LST1-215ENST00000419073 MAGI1Q96QZ7 1491 aaPredicted RBP28.38■■■□□ 2.13
LST1-215ENST00000419073 GAPVD1Q14C86 1478 aa28.35■■■□□ 2.13
LST1-215ENST00000419073 GRIN2BQ13224 1484 aa28.34■■■□□ 2.13
LST1-215ENST00000419073 SYNJ2O15056 1496 aa28.32■■■□□ 2.12
LST1-215ENST00000419073 FGD5Q6ZNL6 1462 aa28.32■■■□□ 2.12
LST1-215ENST00000419073 WDR97A6NE52 1622 aa28.3■■■□□ 2.12
LST1-215ENST00000419073 CUX1P39880 1505 aa28.14■■■□□ 2.1
LST1-215ENST00000419073 ERCC6L2Q5T890 1561 aa28.03■■■□□ 2.08
LST1-215ENST00000419073 PBRM1Q86U86 1689 aa28■■■□□ 2.07
LST1-215ENST00000419073 GRIN2AQ12879 1464 aa27.95■■■□□ 2.06
LST1-215ENST00000419073 ABCA10Q8WWZ4 1543 aa27.93■■■□□ 2.06
LST1-215ENST00000419073 CEP170Q5SW79 1584 aa27.91■■■□□ 2.06
LST1-215ENST00000419073 ABCA5Q8WWZ7 1642 aa27.88■■■□□ 2.05
LST1-215ENST00000419073 NUP160Q12769 1436 aa27.87■■■□□ 2.05
LST1-215ENST00000419073 FAM69CQ0P6D2 419 aa27.85■■■□□ 2.05
LST1-215ENST00000419073 NPM1P06748 294 aaKnown RBP eCLIP27.79■■■□□ 2.04
LST1-215ENST00000419073 KIF13AQ9H1H9 1805 aa27.77■■■□□ 2.04
LST1-215ENST00000419073 ILDR1Q86SU0 546 aaPredicted RBP27.76■■■□□ 2.03
LST1-215ENST00000419073 FHAD1B1AJZ9 1412 aa27.75■■■□□ 2.03
LST1-215ENST00000419073 WRNQ14191 1432 aaPredicted RBP eCLIP27.75■■■□□ 2.03
LST1-215ENST00000419073 PRG4Q92954 1404 aaPredicted RBP27.75■■■□□ 2.03
LST1-215ENST00000419073 ADAMTS12P58397 1594 aa27.75■■■□□ 2.03
LST1-215ENST00000419073 KDM4FA0A1W2PPD8 638 aa27.74■■■□□ 2.03
LST1-215ENST00000419073 SHROOM2Q13796 1616 aa27.74■■■□□ 2.03
LST1-215ENST00000419073 JPH4Q96JJ6 628 aa27.73■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms