RNA–Protein interactions for RNA: ENST00000419046.1

CYB561D2-203, Transcript of cytochrome b561 family member D2, humanhuman

TSL 2

Gene CYB561D2, Length 841 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561D2-203ENST00000419046 NISCHQ9Y2I1 1504 aa47.83■■■■■ 5.25
CYB561D2-203ENST00000419046 ABCC9O60706 1549 aa43.35■■■■■ 4.53
CYB561D2-203ENST00000419046 CCDC180Q9P1Z9 1646 aa43.12■■■■■ 4.49
CYB561D2-203ENST00000419046 RB1CC1Q8TDY2 1594 aa41.15■■■■■ 4.18
CYB561D2-203ENST00000419046 DNAJC5BQ9UF47 199 aa40.94■■■■■ 4.14
CYB561D2-203ENST00000419046 NACADO15069 1562 aa40.81■■■■■ 4.12
CYB561D2-203ENST00000419046 DCAF8L2P0C7V8 631 aa40.32■■■■■ 4.05
CYB561D2-203ENST00000419046 UNC13AQ9UPW8 1703 aa40.28■■■■■ 4.04
CYB561D2-203ENST00000419046 PABPN1Q86U42 306 aaKnown RBP eCLIP40.24■■■■■ 4.03
CYB561D2-203ENST00000419046 MYO15BQ96JP2 1530 aa40.17■■■■■ 4.02
CYB561D2-203ENST00000419046 BICRAQ9NZM4 1560 aa40.01■■■■■ 4
CYB561D2-203ENST00000419046 ZCCHC6Q5VYS8 1495 aaKnown RBP39.61■■■■□ 3.93
CYB561D2-203ENST00000419046 DCAF1Q9Y4B6 1507 aa39.53■■■■□ 3.92
CYB561D2-203ENST00000419046 SHROOM4Q9ULL8 1493 aa39.45■■■■□ 3.91
CYB561D2-203ENST00000419046 SCRIBQ14160 1630 aa39.22■■■■□ 3.87
CYB561D2-203ENST00000419046 CC2D2AQ9P2K1 1620 aa39.18■■■■□ 3.86
CYB561D2-203ENST00000419046 CECR2Q9BXF3 1484 aa39.1■■■■□ 3.85
CYB561D2-203ENST00000419046 EIF4G1Q04637 1599 aaKnown RBP39.03■■■■□ 3.84
CYB561D2-203ENST00000419046 DNAJC5Q9H3Z4 198 aa37.82■■■■□ 3.64
CYB561D2-203ENST00000419046 NCAPD3P42695 1498 aa37.66■■■■□ 3.62
CYB561D2-203ENST00000419046 CUX2O14529 1486 aa37.53■■■■□ 3.6
CYB561D2-203ENST00000419046 ATAD2BQ9ULI0 1458 aa37.5■■■■□ 3.59
CYB561D2-203ENST00000419046 ERCC6Q03468 1493 aa37.43■■■■□ 3.58
CYB561D2-203ENST00000419046 SMARCA4P51532 1647 aa37.41■■■■□ 3.58
CYB561D2-203ENST00000419046 HMGXB3Q12766 1538 aa37.4■■■■□ 3.58
CYB561D2-203ENST00000419046 SMARCA2P51531 1590 aa37.38■■■■□ 3.58
CYB561D2-203ENST00000419046 NESP48681 1621 aa37.17■■■■□ 3.54
CYB561D2-203ENST00000419046 BAZ1AQ9NRL2 1556 aaPredicted RBP37.15■■■■□ 3.54
CYB561D2-203ENST00000419046 BAZ1BQ9UIG0 1483 aaKnown RBP37.1■■■■□ 3.53
CYB561D2-203ENST00000419046 PEG3Q9GZU2 1588 aa37.08■■■■□ 3.53
CYB561D2-203ENST00000419046 THOC2Q8NI27 1593 aaKnown RBP36.92■■■■□ 3.5
CYB561D2-203ENST00000419046 LAMC3Q9Y6N6 1575 aa36.87■■■■□ 3.49
CYB561D2-203ENST00000419046 MROH2BQ7Z745 1585 aa36.86■■■■□ 3.49
CYB561D2-203ENST00000419046 KIF21AQ7Z4S6 1674 aa36.71■■■■□ 3.47
CYB561D2-203ENST00000419046 PDS5BQ9NTI5 1447 aa36.62■■■■□ 3.45
CYB561D2-203ENST00000419046 CADPSQ9ULU8 1353 aa36.47■■■■□ 3.43
CYB561D2-203ENST00000419046 WIZO95785 1651 aa36.39■■■■□ 3.42
CYB561D2-203ENST00000419046 MRC2Q9UBG0 1479 aa36.37■■■■□ 3.41
CYB561D2-203ENST00000419046 WDR62O43379 1518 aa36.33■■■■□ 3.41
CYB561D2-203ENST00000419046 CEP164Q9UPV0 1460 aa36.15■■■■□ 3.38
CYB561D2-203ENST00000419046 FANCD2Q9BXW9 1451 aa36.07■■■■□ 3.37
CYB561D2-203ENST00000419046 CFTRP13569 1480 aa36.03■■■■□ 3.36
CYB561D2-203ENST00000419046 TRIM41Q8WV44 630 aa35.96■■■■□ 3.35
CYB561D2-203ENST00000419046 RSF1Q96T23 1441 aaPredicted RBP35.95■■■■□ 3.35
CYB561D2-203ENST00000419046 TOP2AP11388 1531 aaKnown RBP35.93■■■■□ 3.34
CYB561D2-203ENST00000419046 URB2Q14146 1524 aaKnown RBP35.83■■■■□ 3.33
CYB561D2-203ENST00000419046 PRDM2Q13029 1718 aa35.69■■■■□ 3.3
CYB561D2-203ENST00000419046 OSCARQ8IYS5 282 aa35.66■■■■□ 3.3
CYB561D2-203ENST00000419046 CCDC88BA6NC98 1476 aa35.48■■■■□ 3.27
CYB561D2-203ENST00000419046 IFT140Q96RY7 1462 aa35.44■■■■□ 3.26
CYB561D2-203ENST00000419046 ZNF608Q9ULD9 1512 aaPredicted RBP35.42■■■■□ 3.26
CYB561D2-203ENST00000419046 TOPBP1Q92547 1522 aa35.37■■■■□ 3.25
CYB561D2-203ENST00000419046 RIMBP3CA6NJZ7 1639 aa35.34■■■■□ 3.25
CYB561D2-203ENST00000419046 RIMBP3BA6NNM3 1639 aa35.34■■■■□ 3.25
CYB561D2-203ENST00000419046 RIMBP3Q9UFD9 1639 aa35.34■■■■□ 3.25
CYB561D2-203ENST00000419046 EIF4G3O43432 1585 aaKnown RBP35.25■■■■□ 3.23
CYB561D2-203ENST00000419046 ABCC8Q09428 1581 aa35.24■■■■□ 3.23
CYB561D2-203ENST00000419046 DNMBPQ6XZF7 1577 aa35.23■■■■□ 3.23
CYB561D2-203ENST00000419046 ARHGEF11O15085 1522 aa35.19■■■■□ 3.22
CYB561D2-203ENST00000419046 TARBP1Q13395 1621 aaKnown RBP35.12■■■■□ 3.21
CYB561D2-203ENST00000419046 CHD1O14646 1710 aa35.03■■■■□ 3.2
CYB561D2-203ENST00000419046 AQRO60306 1485 aaKnown RBP eCLIP35.03■■■■□ 3.26e-8■■■□□ 16
CYB561D2-203ENST00000419046 POLA1P09884 1462 aaPredicted RBP34.99■■■■□ 3.19
CYB561D2-203ENST00000419046 ARAP1Q96P48 1450 aa34.84■■■■□ 3.17
CYB561D2-203ENST00000419046 RAD54L2Q9Y4B4 1467 aa34.84■■■■□ 3.17
CYB561D2-203ENST00000419046 CYB5RLQ6IPT4 315 aa34.83■■■■□ 3.17
CYB561D2-203ENST00000419046 SOGA1O94964 1423 aa34.77■■■■□ 3.16
CYB561D2-203ENST00000419046 FBLN2P98095 1184 aa34.76■■■■□ 3.16
CYB561D2-203ENST00000419046 WDR97A6NE52 1622 aa34.74■■■■□ 3.15
CYB561D2-203ENST00000419046 TDRD9Q8NDG6 1382 aaKnown RBP34.74■■■■□ 3.15
CYB561D2-203ENST00000419046 FGD5Q6ZNL6 1462 aa34.72■■■■□ 3.15
CYB561D2-203ENST00000419046 SNAPC4Q5SXM2 1469 aa34.69■■■■□ 3.14
CYB561D2-203ENST00000419046 CUX1P39880 1505 aa34.66■■■■□ 3.14
CYB561D2-203ENST00000419046 CLASP1Q7Z460 1538 aa34.65■■■■□ 3.14
CYB561D2-203ENST00000419046 MAGI1Q96QZ7 1491 aaPredicted RBP34.6■■■■□ 3.13
CYB561D2-203ENST00000419046 SYNJ1O43426 1573 aa34.55■■■■□ 3.12
CYB561D2-203ENST00000419046 GRIN2BQ13224 1484 aa34.54■■■■□ 3.12
CYB561D2-203ENST00000419046 TRHP20396 242 aaPredicted RBP34.51■■■■□ 3.12
CYB561D2-203ENST00000419046 SYNJ2O15056 1496 aa34.48■■■■□ 3.11
CYB561D2-203ENST00000419046 CHMP7Q8WUX9 453 aaPredicted RBP34.48■■■■□ 3.11
CYB561D2-203ENST00000419046 PBRM1Q86U86 1689 aa34.42■■■■□ 3.1
CYB561D2-203ENST00000419046 GAPVD1Q14C86 1478 aa34.37■■■■□ 3.09
CYB561D2-203ENST00000419046 ABCA5Q8WWZ7 1642 aa34.33■■■■□ 3.09
CYB561D2-203ENST00000419046 ABCA10Q8WWZ4 1543 aa34.32■■■■□ 3.08
CYB561D2-203ENST00000419046 GRIN2AQ12879 1464 aa34.12■■■■□ 3.05
CYB561D2-203ENST00000419046 ADAMTS12P58397 1594 aa34.1■■■■□ 3.05
CYB561D2-203ENST00000419046 WRNQ14191 1432 aaPredicted RBP eCLIP34.07■■■■□ 3.04
CYB561D2-203ENST00000419046 ERCC6L2Q5T890 1561 aa34.06■■■■□ 3.04
CYB561D2-203ENST00000419046 BIVM-ERCC5R4GMW8 1640 aa34.04■■■■□ 3.04
CYB561D2-203ENST00000419046 NUP160Q12769 1436 aa34.04■■■■□ 3.04
CYB561D2-203ENST00000419046 CEP170Q5SW79 1584 aa34.03■■■■□ 3.04
CYB561D2-203ENST00000419046 TOP2BQ02880 1626 aa34.01■■■■□ 3.04
CYB561D2-203ENST00000419046 SUPT5HO00267 1087 aaKnown RBP33.98■■■■□ 3.03
CYB561D2-203ENST00000419046 SHROOM2Q13796 1616 aa33.95■■■■□ 3.03
CYB561D2-203ENST00000419046 FHAD1B1AJZ9 1412 aa33.92■■■■□ 3.02
CYB561D2-203ENST00000419046 ERICH3Q5RHP9 1530 aa33.89■■■■□ 3.02
CYB561D2-203ENST00000419046 AEBP2Q6ZN18 517 aaPredicted RBP33.73■■■□□ 2.99
CYB561D2-203ENST00000419046 PRG4Q92954 1404 aaPredicted RBP33.67■■■□□ 2.98
CYB561D2-203ENST00000419046 KIF13AQ9H1H9 1805 aa33.65■■■□□ 2.98
CYB561D2-203ENST00000419046 RUSC2Q8N2Y8 1516 aa33.63■■■□□ 2.97
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms