RNA–Protein interactions for RNA: ENST00000419020.1

DDX39B-205, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-205ENST00000419020 NISCHQ9Y2I1 1504 aa30.4■■■□□ 2.46
DDX39B-205ENST00000419020 ABCC9O60706 1549 aa28.64■■■□□ 2.17
DDX39B-205ENST00000419020 DNAJC5BQ9UF47 199 aa27.75■■■□□ 2.03
DDX39B-205ENST00000419020 CCDC180Q9P1Z9 1646 aa27.65■■■□□ 2.02
DDX39B-205ENST00000419020 RB1CC1Q8TDY2 1594 aa26.8■■□□□ 1.88
DDX39B-205ENST00000419020 PABPN1Q86U42 306 aaKnown RBP eCLIP26.53■■□□□ 1.84
DDX39B-205ENST00000419020 NACADO15069 1562 aa26.38■■□□□ 1.81
DDX39B-205ENST00000419020 UNC13AQ9UPW8 1703 aa26.2■■□□□ 1.79
DDX39B-205ENST00000419020 DNAJC5Q9H3Z4 198 aa26.14■■□□□ 1.78
DDX39B-205ENST00000419020 BICRAQ9NZM4 1560 aa26.1■■□□□ 1.77
DDX39B-205ENST00000419020 DCAF8L2P0C7V8 631 aa26.08■■□□□ 1.77
DDX39B-205ENST00000419020 CECR2Q9BXF3 1484 aa25.89■■□□□ 1.73
DDX39B-205ENST00000419020 CC2D2AQ9P2K1 1620 aa25.81■■□□□ 1.72
DDX39B-205ENST00000419020 MYO15BQ96JP2 1530 aa25.7■■□□□ 1.7
DDX39B-205ENST00000419020 SHROOM4Q9ULL8 1493 aa25.59■■□□□ 1.69
DDX39B-205ENST00000419020 EIF4G1Q04637 1599 aaKnown RBP25.52■■□□□ 1.68
DDX39B-205ENST00000419020 SCRIBQ14160 1630 aa25.17■■□□□ 1.62
DDX39B-205ENST00000419020 CUX2O14529 1486 aa25.04■■□□□ 1.6
DDX39B-205ENST00000419020 DCAF1Q9Y4B6 1507 aa25.02■■□□□ 1.6
DDX39B-205ENST00000419020 ZCCHC6Q5VYS8 1495 aaKnown RBP24.99■■□□□ 1.59
DDX39B-205ENST00000419020 ERCC6Q03468 1493 aa24.77■■□□□ 1.56
DDX39B-205ENST00000419020 TRIM41Q8WV44 630 aa24.6■■□□□ 1.53
DDX39B-205ENST00000419020 NCAPD3P42695 1498 aa24.39■■□□□ 1.5
DDX39B-205ENST00000419020 NESP48681 1621 aa24.35■■□□□ 1.49
DDX39B-205ENST00000419020 THOC2Q8NI27 1593 aaKnown RBP24.26■■□□□ 1.47
DDX39B-205ENST00000419020 ATAD2BQ9ULI0 1458 aa24.19■■□□□ 1.46
DDX39B-205ENST00000419020 HMGXB3Q12766 1538 aa24.1■■□□□ 1.45
DDX39B-205ENST00000419020 SMARCA2P51531 1590 aa24.06■■□□□ 1.44
DDX39B-205ENST00000419020 LAMC3Q9Y6N6 1575 aa23.97■■□□□ 1.43
DDX39B-205ENST00000419020 KIF21AQ7Z4S6 1674 aa23.96■■□□□ 1.43
DDX39B-205ENST00000419020 SMARCA4P51532 1647 aa23.91■■□□□ 1.42
DDX39B-205ENST00000419020 BAZ1BQ9UIG0 1483 aaKnown RBP23.88■■□□□ 1.41
DDX39B-205ENST00000419020 PDS5BQ9NTI5 1447 aa23.86■■□□□ 1.41
DDX39B-205ENST00000419020 BAZ1AQ9NRL2 1556 aaPredicted RBP23.81■■□□□ 1.4
DDX39B-205ENST00000419020 OSCARQ8IYS5 282 aa23.75■■□□□ 1.39
DDX39B-205ENST00000419020 MRC2Q9UBG0 1479 aa23.73■■□□□ 1.39
DDX39B-205ENST00000419020 WDR62O43379 1518 aa23.71■■□□□ 1.39
DDX39B-205ENST00000419020 PEG3Q9GZU2 1588 aa23.68■■□□□ 1.38
DDX39B-205ENST00000419020 CADPSQ9ULU8 1353 aa23.61■■□□□ 1.37
DDX39B-205ENST00000419020 RIMBP3CA6NJZ7 1639 aa23.55■■□□□ 1.36
DDX39B-205ENST00000419020 RIMBP3BA6NNM3 1639 aa23.55■■□□□ 1.36
DDX39B-205ENST00000419020 RIMBP3Q9UFD9 1639 aa23.55■■□□□ 1.36
DDX39B-205ENST00000419020 CEP164Q9UPV0 1460 aa23.44■■□□□ 1.34
DDX39B-205ENST00000419020 MROH2BQ7Z745 1585 aa23.43■■□□□ 1.34
DDX39B-205ENST00000419020 ARHGEF11O15085 1522 aa23.38■■□□□ 1.33
DDX39B-205ENST00000419020 FANCD2Q9BXW9 1451 aa23.34■■□□□ 1.33
DDX39B-205ENST00000419020 AEBP2Q6ZN18 517 aaPredicted RBP23.32■■□□□ 1.32
DDX39B-205ENST00000419020 TRHP20396 242 aaPredicted RBP23.31■■□□□ 1.32
DDX39B-205ENST00000419020 CYB5RLQ6IPT4 315 aa23.28■■□□□ 1.32
DDX39B-205ENST00000419020 URB2Q14146 1524 aaKnown RBP23.23■■□□□ 1.31
DDX39B-205ENST00000419020 CFTRP13569 1480 aa23.14■■□□□ 1.29
DDX39B-205ENST00000419020 ZNF608Q9ULD9 1512 aaPredicted RBP23.1■■□□□ 1.29
DDX39B-205ENST00000419020 ARAP1Q96P48 1450 aa23.1■■□□□ 1.29
DDX39B-205ENST00000419020 WIZO95785 1651 aa23.09■■□□□ 1.29
DDX39B-205ENST00000419020 IFT140Q96RY7 1462 aa23■■□□□ 1.27
DDX39B-205ENST00000419020 RSF1Q96T23 1441 aaPredicted RBP22.91■■□□□ 1.26
DDX39B-205ENST00000419020 CHD1O14646 1710 aa22.9■■□□□ 1.26
DDX39B-205ENST00000419020 EIF4G3O43432 1585 aaKnown RBP22.89■■□□□ 1.26
DDX39B-205ENST00000419020 TOPBP1Q92547 1522 aa22.79■■□□□ 1.24
DDX39B-205ENST00000419020 FBLN2P98095 1184 aa22.79■■□□□ 1.24
DDX39B-205ENST00000419020 PRDM2Q13029 1718 aa22.77■■□□□ 1.24
DDX39B-205ENST00000419020 AQRO60306 1485 aaKnown RBP eCLIP22.77■■□□□ 1.241e-7■■■■□ 25.7
DDX39B-205ENST00000419020 TOP2AP11388 1531 aaKnown RBP22.72■■□□□ 1.23
DDX39B-205ENST00000419020 TARBP1Q13395 1621 aaKnown RBP22.67■■□□□ 1.22
DDX39B-205ENST00000419020 ABCC8Q09428 1581 aa22.64■■□□□ 1.22
DDX39B-205ENST00000419020 CLASP1Q7Z460 1538 aa22.63■■□□□ 1.21
DDX39B-205ENST00000419020 DNMBPQ6XZF7 1577 aa22.6■■□□□ 1.21
DDX39B-205ENST00000419020 POLA1P09884 1462 aaPredicted RBP22.51■■□□□ 1.19
DDX39B-205ENST00000419020 ILDR1Q86SU0 546 aaPredicted RBP22.5■■□□□ 1.19
DDX39B-205ENST00000419020 SYNJ1O43426 1573 aa22.5■■□□□ 1.19
DDX39B-205ENST00000419020 SNAPC4Q5SXM2 1469 aa22.49■■□□□ 1.19
DDX39B-205ENST00000419020 CCDC88BA6NC98 1476 aa22.48■■□□□ 1.19
DDX39B-205ENST00000419020 TDRD9Q8NDG6 1382 aaKnown RBP22.48■■□□□ 1.19
DDX39B-205ENST00000419020 CHMP7Q8WUX9 453 aaPredicted RBP22.46■■□□□ 1.19
DDX39B-205ENST00000419020 GAPVD1Q14C86 1478 aa22.46■■□□□ 1.19
DDX39B-205ENST00000419020 RAD54L2Q9Y4B4 1467 aa22.45■■□□□ 1.18
DDX39B-205ENST00000419020 SOGA1O94964 1423 aa22.38■■□□□ 1.17
DDX39B-205ENST00000419020 MAGI1Q96QZ7 1491 aaPredicted RBP22.37■■□□□ 1.17
DDX39B-205ENST00000419020 SYNJ2O15056 1496 aa22.33■■□□□ 1.16
DDX39B-205ENST00000419020 WDR97A6NE52 1622 aa22.32■■□□□ 1.16
DDX39B-205ENST00000419020 GRIN2BQ13224 1484 aa22.28■■□□□ 1.16
DDX39B-205ENST00000419020 ERCC6L2Q5T890 1561 aa22.24■■□□□ 1.15
DDX39B-205ENST00000419020 FGD5Q6ZNL6 1462 aa22.22■■□□□ 1.15
DDX39B-205ENST00000419020 KIF13AQ9H1H9 1805 aa22.22■■□□□ 1.15
DDX39B-205ENST00000419020 KDM4FA0A1W2PPD8 638 aa22.21■■□□□ 1.15
DDX39B-205ENST00000419020 PBRM1Q86U86 1689 aa22.11■■□□□ 1.13
DDX39B-205ENST00000419020 CEP170Q5SW79 1584 aa22.08■■□□□ 1.13
DDX39B-205ENST00000419020 CUX1P39880 1505 aa22.06■■□□□ 1.12
DDX39B-205ENST00000419020 FAM69CQ0P6D2 419 aa22.01■■□□□ 1.11
DDX39B-205ENST00000419020 GRIN2AQ12879 1464 aa22.01■■□□□ 1.11
DDX39B-205ENST00000419020 ABCC10Q5T3U5 1492 aa21.98■■□□□ 1.11
DDX39B-205ENST00000419020 SHROOM2Q13796 1616 aa21.98■■□□□ 1.11
DDX39B-205ENST00000419020 NUP160Q12769 1436 aa21.97■■□□□ 1.11
DDX39B-205ENST00000419020 ABCA5Q8WWZ7 1642 aa21.96■■□□□ 1.11
DDX39B-205ENST00000419020 KDM6BO15054 1643 aa21.94■■□□□ 1.1
DDX39B-205ENST00000419020 ABCA10Q8WWZ4 1543 aa21.9■■□□□ 1.1
DDX39B-205ENST00000419020 DIP2BQ9P265 1576 aa21.89■■□□□ 1.09
DDX39B-205ENST00000419020 ADAMTS12P58397 1594 aa21.87■■□□□ 1.09
DDX39B-205ENST00000419020 MAPKBP1O60336 1514 aa21.85■■□□□ 1.09
DDX39B-205ENST00000419020 PRG4Q92954 1404 aaPredicted RBP21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms