RNA–Protein interactions for RNA: ENST00000419015.1

COPS8-204, Transcript of COP9 signalosome subunit 8, humanhuman

TSL 3

Gene COPS8, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS8-204ENST00000419015 NISCHQ9Y2I1 1504 aa46.18■■■■■ 4.98
COPS8-204ENST00000419015 CCDC180Q9P1Z9 1646 aa41.45■■■■■ 4.23
COPS8-204ENST00000419015 ABCC9O60706 1549 aa41.37■■■■■ 4.21
COPS8-204ENST00000419015 RB1CC1Q8TDY2 1594 aa39.41■■■■□ 3.9
COPS8-204ENST00000419015 NACADO15069 1562 aa39.16■■■■□ 3.86
COPS8-204ENST00000419015 DNAJC5BQ9UF47 199 aa38.85■■■■□ 3.81
COPS8-204ENST00000419015 DCAF8L2P0C7V8 631 aa38.81■■■■□ 3.8
COPS8-204ENST00000419015 MYO15BQ96JP2 1530 aa38.68■■■■□ 3.78
COPS8-204ENST00000419015 UNC13AQ9UPW8 1703 aa38.62■■■■□ 3.77
COPS8-204ENST00000419015 PABPN1Q86U42 306 aaKnown RBP eCLIP38.49■■■■□ 3.75
COPS8-204ENST00000419015 BICRAQ9NZM4 1560 aa38.33■■■■□ 3.73
COPS8-204ENST00000419015 ZCCHC6Q5VYS8 1495 aaKnown RBP38.29■■■■□ 3.72
COPS8-204ENST00000419015 DCAF1Q9Y4B6 1507 aa38.17■■■■□ 3.7
COPS8-204ENST00000419015 SHROOM4Q9ULL8 1493 aa37.78■■■■□ 3.64
COPS8-204ENST00000419015 SCRIBQ14160 1630 aa37.72■■■■□ 3.63
COPS8-204ENST00000419015 CC2D2AQ9P2K1 1620 aa37.42■■■■□ 3.58
COPS8-204ENST00000419015 EIF4G1Q04637 1599 aaKnown RBP37.35■■■■□ 3.57
COPS8-204ENST00000419015 CECR2Q9BXF3 1484 aa37.27■■■■□ 3.56
COPS8-204ENST00000419015 NCAPD3P42695 1498 aa36.17■■■■□ 3.38
COPS8-204ENST00000419015 ATAD2BQ9ULI0 1458 aa36.05■■■■□ 3.36
COPS8-204ENST00000419015 SMARCA4P51532 1647 aa36.02■■■■□ 3.36
COPS8-204ENST00000419015 SMARCA2P51531 1590 aa35.93■■■■□ 3.34
COPS8-204ENST00000419015 HMGXB3Q12766 1538 aa35.9■■■■□ 3.34
COPS8-204ENST00000419015 BAZ1AQ9NRL2 1556 aaPredicted RBP35.82■■■■□ 3.32
COPS8-204ENST00000419015 PEG3Q9GZU2 1588 aa35.72■■■■□ 3.31
COPS8-204ENST00000419015 CUX2O14529 1486 aa35.67■■■■□ 3.3
COPS8-204ENST00000419015 ERCC6Q03468 1493 aa35.67■■■■□ 3.3
COPS8-204ENST00000419015 BAZ1BQ9UIG0 1483 aaKnown RBP35.66■■■■□ 3.3
COPS8-204ENST00000419015 DNAJC5Q9H3Z4 198 aa35.63■■■■□ 3.29
COPS8-204ENST00000419015 MROH2BQ7Z745 1585 aa35.58■■■■□ 3.29
COPS8-204ENST00000419015 NESP48681 1621 aa35.57■■■■□ 3.29
COPS8-204ENST00000419015 LAMC3Q9Y6N6 1575 aa35.34■■■■□ 3.25
COPS8-204ENST00000419015 THOC2Q8NI27 1593 aaKnown RBP35.25■■■■□ 3.23
COPS8-204ENST00000419015 WIZO95785 1651 aa35.16■■■■□ 3.22
COPS8-204ENST00000419015 KIF21AQ7Z4S6 1674 aa35.15■■■■□ 3.22
COPS8-204ENST00000419015 PDS5BQ9NTI5 1447 aa35.08■■■■□ 3.21
COPS8-204ENST00000419015 CADPSQ9ULU8 1353 aa35.03■■■■□ 3.2
COPS8-204ENST00000419015 RSF1Q96T23 1441 aaPredicted RBP34.84■■■■□ 3.17
COPS8-204ENST00000419015 MRC2Q9UBG0 1479 aa34.8■■■■□ 3.16
COPS8-204ENST00000419015 WDR62O43379 1518 aa34.76■■■■□ 3.15
COPS8-204ENST00000419015 TOP2AP11388 1531 aaKnown RBP34.71■■■■□ 3.15
COPS8-204ENST00000419015 CFTRP13569 1480 aa34.67■■■■□ 3.14
COPS8-204ENST00000419015 CEP164Q9UPV0 1460 aa34.65■■■■□ 3.14
COPS8-204ENST00000419015 FANCD2Q9BXW9 1451 aa34.63■■■■□ 3.13
COPS8-204ENST00000419015 URB2Q14146 1524 aaKnown RBP34.38■■■■□ 3.09
COPS8-204ENST00000419015 PRDM2Q13029 1718 aa34.36■■■■□ 3.09
COPS8-204ENST00000419015 CCDC88BA6NC98 1476 aa34.31■■■■□ 3.08
COPS8-204ENST00000419015 OSCARQ8IYS5 282 aa34■■■■□ 3.03
COPS8-204ENST00000419015 TOPBP1Q92547 1522 aa33.99■■■■□ 3.03
COPS8-204ENST00000419015 TRIM41Q8WV44 630 aa33.99■■■■□ 3.03
COPS8-204ENST00000419015 IFT140Q96RY7 1462 aa33.97■■■■□ 3.03
COPS8-204ENST00000419015 ZNF608Q9ULD9 1512 aaPredicted RBP33.94■■■■□ 3.02
COPS8-204ENST00000419015 ABCC8Q09428 1581 aa33.9■■■■□ 3.02
COPS8-204ENST00000419015 DNMBPQ6XZF7 1577 aa33.87■■■■□ 3.01
COPS8-204ENST00000419015 EIF4G3O43432 1585 aaKnown RBP33.77■■■■□ 3
COPS8-204ENST00000419015 TARBP1Q13395 1621 aaKnown RBP33.73■■■□□ 2.99
COPS8-204ENST00000419015 POLA1P09884 1462 aaPredicted RBP33.66■■■□□ 2.98
COPS8-204ENST00000419015 RIMBP3CA6NJZ7 1639 aa33.62■■■□□ 2.97
COPS8-204ENST00000419015 RIMBP3BA6NNM3 1639 aa33.62■■■□□ 2.97
COPS8-204ENST00000419015 RIMBP3Q9UFD9 1639 aa33.62■■■□□ 2.97
COPS8-204ENST00000419015 AQRO60306 1485 aaKnown RBP eCLIP33.61■■■□□ 2.97
COPS8-204ENST00000419015 CHD1O14646 1710 aa33.52■■■□□ 2.96
COPS8-204ENST00000419015 RAD54L2Q9Y4B4 1467 aa33.51■■■□□ 2.96
COPS8-204ENST00000419015 ARHGEF11O15085 1522 aa33.51■■■□□ 2.95
COPS8-204ENST00000419015 SOGA1O94964 1423 aa33.45■■■□□ 2.95
COPS8-204ENST00000419015 FGD5Q6ZNL6 1462 aa33.44■■■□□ 2.94
COPS8-204ENST00000419015 CUX1P39880 1505 aa33.43■■■□□ 2.94
COPS8-204ENST00000419015 TDRD9Q8NDG6 1382 aaKnown RBP33.39■■■□□ 2.94
COPS8-204ENST00000419015 WDR97A6NE52 1622 aa33.37■■■□□ 2.93
COPS8-204ENST00000419015 FBLN2P98095 1184 aa33.29■■■□□ 2.92
COPS8-204ENST00000419015 SNAPC4Q5SXM2 1469 aa33.27■■■□□ 2.92
COPS8-204ENST00000419015 MAGI1Q96QZ7 1491 aaPredicted RBP33.19■■■□□ 2.9
COPS8-204ENST00000419015 SUPT5HO00267 1087 aaKnown RBP33.19■■■□□ 2.9
COPS8-204ENST00000419015 CYB5RLQ6IPT4 315 aa33.19■■■□□ 2.9
COPS8-204ENST00000419015 ARAP1Q96P48 1450 aa33.18■■■□□ 2.9
COPS8-204ENST00000419015 GRIN2BQ13224 1484 aa33.18■■■□□ 2.9
COPS8-204ENST00000419015 CLASP1Q7Z460 1538 aa33.14■■■□□ 2.9
COPS8-204ENST00000419015 PBRM1Q86U86 1689 aa33.1■■■□□ 2.89
COPS8-204ENST00000419015 SYNJ2O15056 1496 aa33.08■■■□□ 2.89
COPS8-204ENST00000419015 CHMP7Q8WUX9 453 aaPredicted RBP33.08■■■□□ 2.89
COPS8-204ENST00000419015 SYNJ1O43426 1573 aa33.07■■■□□ 2.88
COPS8-204ENST00000419015 ABCA10Q8WWZ4 1543 aa33.07■■■□□ 2.88
COPS8-204ENST00000419015 GAPVD1Q14C86 1478 aa33.06■■■□□ 2.88
COPS8-204ENST00000419015 ABCA5Q8WWZ7 1642 aa33.04■■■□□ 2.88
COPS8-204ENST00000419015 BIVM-ERCC5R4GMW8 1640 aa32.91■■■□□ 2.86
COPS8-204ENST00000419015 TOP2BQ02880 1626 aa32.9■■■□□ 2.86
COPS8-204ENST00000419015 WRNQ14191 1432 aaPredicted RBP eCLIP32.89■■■□□ 2.86
COPS8-204ENST00000419015 TRHP20396 242 aaPredicted RBP32.77■■■□□ 2.84
COPS8-204ENST00000419015 GRIN2AQ12879 1464 aa32.77■■■□□ 2.84
COPS8-204ENST00000419015 ADAMTS12P58397 1594 aa32.77■■■□□ 2.84
COPS8-204ENST00000419015 NUP160Q12769 1436 aa32.68■■■□□ 2.82
COPS8-204ENST00000419015 CEP170Q5SW79 1584 aa32.67■■■□□ 2.82
COPS8-204ENST00000419015 ERICH3Q5RHP9 1530 aa32.66■■■□□ 2.82
COPS8-204ENST00000419015 FHAD1B1AJZ9 1412 aa32.65■■■□□ 2.82
COPS8-204ENST00000419015 ERCC6L2Q5T890 1561 aa32.62■■■□□ 2.81
COPS8-204ENST00000419015 SHROOM2Q13796 1616 aa32.56■■■□□ 2.8
COPS8-204ENST00000419015 RUSC2Q8N2Y8 1516 aa32.32■■■□□ 2.76
COPS8-204ENST00000419015 PRG4Q92954 1404 aaPredicted RBP32.31■■■□□ 2.76
COPS8-204ENST00000419015 JPH4Q96JJ6 628 aa32.29■■■□□ 2.76
COPS8-204ENST00000419015 IGF1RP08069 1367 aa32.23■■■□□ 2.75
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms