RNA–Protein interactions for RNA: ENST00000418701.2

CHCHD2P4-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 2 pseudogene 4, humanhuman

BASIC

Gene CHCHD2P4, Length 434 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD2P4-201ENST00000418701 NISCHQ9Y2I1 1504 aa25.76■■□□□ 1.71
CHCHD2P4-201ENST00000418701 CCDC180Q9P1Z9 1646 aa22.7■■□□□ 1.22
CHCHD2P4-201ENST00000418701 ABCC9O60706 1549 aa21.75■■□□□ 1.07
CHCHD2P4-201ENST00000418701 ZCCHC6Q5VYS8 1495 aaKnown RBP21.55■■□□□ 1.04
CHCHD2P4-201ENST00000418701 DCAF1Q9Y4B6 1507 aa21.4■■□□□ 1.02
CHCHD2P4-201ENST00000418701 MYO15BQ96JP2 1530 aa21.33■■□□□ 1
CHCHD2P4-201ENST00000418701 NACADO15069 1562 aa21.23■□□□□ 0.99
CHCHD2P4-201ENST00000418701 DCAF8L2P0C7V8 631 aa21.2■□□□□ 0.98
CHCHD2P4-201ENST00000418701 RB1CC1Q8TDY2 1594 aa21.11■□□□□ 0.97
CHCHD2P4-201ENST00000418701 SCRIBQ14160 1630 aa20.65■□□□□ 0.9
CHCHD2P4-201ENST00000418701 UNC13AQ9UPW8 1703 aa20.64■□□□□ 0.89
CHCHD2P4-201ENST00000418701 SHROOM4Q9ULL8 1493 aa20.49■□□□□ 0.87
CHCHD2P4-201ENST00000418701 BICRAQ9NZM4 1560 aa20.46■□□□□ 0.87
CHCHD2P4-201ENST00000418701 PABPN1Q86U42 306 aaKnown RBP eCLIP20.31■□□□□ 0.84
CHCHD2P4-201ENST00000418701 DNAJC5BQ9UF47 199 aa20.04■□□□□ 0.8
CHCHD2P4-201ENST00000418701 CECR2Q9BXF3 1484 aa19.97■□□□□ 0.79
CHCHD2P4-201ENST00000418701 BAZ1AQ9NRL2 1556 aaPredicted RBP19.93■□□□□ 0.78
CHCHD2P4-201ENST00000418701 EIF4G1Q04637 1599 aaKnown RBP19.87■□□□□ 0.77
CHCHD2P4-201ENST00000418701 SMARCA4P51532 1647 aa19.86■□□□□ 0.77
CHCHD2P4-201ENST00000418701 MROH2BQ7Z745 1585 aa19.82■□□□□ 0.76
CHCHD2P4-201ENST00000418701 RSF1Q96T23 1441 aaPredicted RBP19.79■□□□□ 0.76
CHCHD2P4-201ENST00000418701 PEG3Q9GZU2 1588 aa19.74■□□□□ 0.75
CHCHD2P4-201ENST00000418701 CC2D2AQ9P2K1 1620 aa19.72■□□□□ 0.75
CHCHD2P4-201ENST00000418701 SMARCA2P51531 1590 aa19.66■□□□□ 0.74
CHCHD2P4-201ENST00000418701 ATAD2BQ9ULI0 1458 aa19.65■□□□□ 0.74
CHCHD2P4-201ENST00000418701 WIZO95785 1651 aa19.62■□□□□ 0.73
CHCHD2P4-201ENST00000418701 NCAPD3P42695 1498 aa19.6■□□□□ 0.73
CHCHD2P4-201ENST00000418701 SUPT5HO00267 1087 aaKnown RBP19.55■□□□□ 0.72
CHCHD2P4-201ENST00000418701 HMGXB3Q12766 1538 aa19.53■□□□□ 0.72
CHCHD2P4-201ENST00000418701 BAZ1BQ9UIG0 1483 aaKnown RBP19.48■□□□□ 0.71
CHCHD2P4-201ENST00000418701 TOP2AP11388 1531 aaKnown RBP19.47■□□□□ 0.71
CHCHD2P4-201ENST00000418701 CCDC88BA6NC98 1476 aa19.24■□□□□ 0.67
CHCHD2P4-201ENST00000418701 CFTRP13569 1480 aa19.03■□□□□ 0.64
CHCHD2P4-201ENST00000418701 CADPSQ9ULU8 1353 aa19.03■□□□□ 0.64
CHCHD2P4-201ENST00000418701 LAMC3Q9Y6N6 1575 aa18.98■□□□□ 0.63
CHCHD2P4-201ENST00000418701 PRDM2Q13029 1718 aa18.91■□□□□ 0.62
CHCHD2P4-201ENST00000418701 NESP48681 1621 aa18.89■□□□□ 0.62
CHCHD2P4-201ENST00000418701 PDS5BQ9NTI5 1447 aa18.83■□□□□ 0.61
CHCHD2P4-201ENST00000418701 FANCD2Q9BXW9 1451 aa18.77■□□□□ 0.6
CHCHD2P4-201ENST00000418701 ERCC6Q03468 1493 aa18.72■□□□□ 0.59
CHCHD2P4-201ENST00000418701 KIF21AQ7Z4S6 1674 aa18.7■□□□□ 0.58
CHCHD2P4-201ENST00000418701 CEP164Q9UPV0 1460 aa18.7■□□□□ 0.58
CHCHD2P4-201ENST00000418701 WRNQ14191 1432 aaPredicted RBP eCLIP18.63■□□□□ 0.57
CHCHD2P4-201ENST00000418701 ABCC8Q09428 1581 aa18.62■□□□□ 0.57
CHCHD2P4-201ENST00000418701 CHIC1Q5VXU3 224 aa18.61■□□□□ 0.57
CHCHD2P4-201ENST00000418701 CUX2O14529 1486 aa18.59■□□□□ 0.57
CHCHD2P4-201ENST00000418701 THOC2Q8NI27 1593 aaKnown RBP18.59■□□□□ 0.57
CHCHD2P4-201ENST00000418701 MRC2Q9UBG0 1479 aa18.58■□□□□ 0.57
CHCHD2P4-201ENST00000418701 CUX1P39880 1505 aa18.57■□□□□ 0.56
CHCHD2P4-201ENST00000418701 TOP2BQ02880 1626 aa18.56■□□□□ 0.56
CHCHD2P4-201ENST00000418701 DNMBPQ6XZF7 1577 aa18.56■□□□□ 0.56
CHCHD2P4-201ENST00000418701 URB2Q14146 1524 aaKnown RBP18.56■□□□□ 0.56
CHCHD2P4-201ENST00000418701 BIVM-ERCC5R4GMW8 1640 aa18.56■□□□□ 0.56
CHCHD2P4-201ENST00000418701 SYNJ1O43426 1573 aa18.55■□□□□ 0.56
CHCHD2P4-201ENST00000418701 TOPBP1Q92547 1522 aa18.54■□□□□ 0.56
CHCHD2P4-201ENST00000418701 WDR62O43379 1518 aa18.53■□□□□ 0.56
CHCHD2P4-201ENST00000418701 TRIM41Q8WV44 630 aa18.5■□□□□ 0.55
CHCHD2P4-201ENST00000418701 POLA1P09884 1462 aaPredicted RBP18.41■□□□□ 0.54
CHCHD2P4-201ENST00000418701 FGD5Q6ZNL6 1462 aa18.41■□□□□ 0.54
CHCHD2P4-201ENST00000418701 SOGA1O94964 1423 aa18.35■□□□□ 0.53
CHCHD2P4-201ENST00000418701 TARBP1Q13395 1621 aaKnown RBP18.32■□□□□ 0.52
CHCHD2P4-201ENST00000418701 IFT140Q96RY7 1462 aa18.32■□□□□ 0.52
CHCHD2P4-201ENST00000418701 ABCA10Q8WWZ4 1543 aa18.31■□□□□ 0.52
CHCHD2P4-201ENST00000418701 RAD54L2Q9Y4B4 1467 aa18.29■□□□□ 0.52
CHCHD2P4-201ENST00000418701 WDR97A6NE52 1622 aa18.27■□□□□ 0.51
CHCHD2P4-201ENST00000418701 EEA1Q15075 1411 aa18.22■□□□□ 0.51
CHCHD2P4-201ENST00000418701 KIF27Q86VH2 1401 aa18.21■□□□□ 0.51
CHCHD2P4-201ENST00000418701 ABCA5Q8WWZ7 1642 aa18.18■□□□□ 0.5
CHCHD2P4-201ENST00000418701 RUSC2Q8N2Y8 1516 aa18.16■□□□□ 0.5
CHCHD2P4-201ENST00000418701 TDRD9Q8NDG6 1382 aaKnown RBP18.16■□□□□ 0.5
CHCHD2P4-201ENST00000418701 ZNF608Q9ULD9 1512 aaPredicted RBP18.15■□□□□ 0.5
CHCHD2P4-201ENST00000418701 GAPVD1Q14C86 1478 aa18.14■□□□□ 0.49
CHCHD2P4-201ENST00000418701 AQRO60306 1485 aaKnown RBP eCLIP18.12■□□□□ 0.49
CHCHD2P4-201ENST00000418701 IGF1RP08069 1367 aa18.11■□□□□ 0.49
CHCHD2P4-201ENST00000418701 ERICH3Q5RHP9 1530 aa18.11■□□□□ 0.49
CHCHD2P4-201ENST00000418701 EIF4G3O43432 1585 aaKnown RBP18.11■□□□□ 0.49
CHCHD2P4-201ENST00000418701 CSRNP3Q8WYN3 585 aa18.1■□□□□ 0.49
CHCHD2P4-201ENST00000418701 GRIN2BQ13224 1484 aa18.08■□□□□ 0.49
CHCHD2P4-201ENST00000418701 DNAJC5Q9H3Z4 198 aa18.08■□□□□ 0.48
CHCHD2P4-201ENST00000418701 PBRM1Q86U86 1689 aa18.06■□□□□ 0.48
CHCHD2P4-201ENST00000418701 FAM9AQ8IZU1 332 aaPredicted RBP18.02■□□□□ 0.48
CHCHD2P4-201ENST00000418701 CUL7Q14999 1698 aa18.02■□□□□ 0.47
CHCHD2P4-201ENST00000418701 PRXQ9BXM0 1461 aa18.01■□□□□ 0.47
CHCHD2P4-201ENST00000418701 MAGI1Q96QZ7 1491 aaPredicted RBP18■□□□□ 0.47
CHCHD2P4-201ENST00000418701 CARMIL1Q5VZK9 1371 aa17.98■□□□□ 0.47
CHCHD2P4-201ENST00000418701 KIF21BO75037 1637 aa17.97■□□□□ 0.47
CHCHD2P4-201ENST00000418701 FHAD1B1AJZ9 1412 aa17.97■□□□□ 0.47
CHCHD2P4-201ENST00000418701 SNAPC4Q5SXM2 1469 aa17.95■□□□□ 0.46
CHCHD2P4-201ENST00000418701 ADAMTS12P58397 1594 aa17.94■□□□□ 0.46
CHCHD2P4-201ENST00000418701 RAPGEF2Q9Y4G8 1499 aa17.93■□□□□ 0.46
CHCHD2P4-201ENST00000418701 SYNJ2O15056 1496 aa17.92■□□□□ 0.46
CHCHD2P4-201ENST00000418701 GOLGA3Q08378 1498 aa17.88■□□□□ 0.45
CHCHD2P4-201ENST00000418701 GRIN2AQ12879 1464 aa17.84■□□□□ 0.45
CHCHD2P4-201ENST00000418701 CHMP7Q8WUX9 453 aaPredicted RBP17.84■□□□□ 0.45
CHCHD2P4-201ENST00000418701 LOC105371045A0A1W2PR82 267 aa17.8■□□□□ 0.44
CHCHD2P4-201ENST00000418701 OSCARQ8IYS5 282 aa17.79■□□□□ 0.44
CHCHD2P4-201ENST00000418701 CHD1O14646 1710 aa17.78■□□□□ 0.44
CHCHD2P4-201ENST00000418701 TNIKQ9UKE5 1360 aa17.78■□□□□ 0.44
CHCHD2P4-201ENST00000418701 NUP160Q12769 1436 aa17.77■□□□□ 0.44
CHCHD2P4-201ENST00000418701 UBTFP17480 764 aaKnown RBP17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms