RNA–Protein interactions for RNA: ENST00000418653.5

SNAP47-204, Transcript of synaptosome associated protein 47, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SNAP47, Length 1,867 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47-204ENST00000418653 NISCHQ9Y2I1 1504 aa29.52■■■□□ 2.32
SNAP47-204ENST00000418653 ABCC9O60706 1549 aa27.52■■■□□ 2
SNAP47-204ENST00000418653 CCDC180Q9P1Z9 1646 aa27.03■■□□□ 1.92
SNAP47-204ENST00000418653 DNAJC5BQ9UF47 199 aa26.45■■□□□ 1.82
SNAP47-204ENST00000418653 RB1CC1Q8TDY2 1594 aa26.04■■□□□ 1.76
SNAP47-204ENST00000418653 NACADO15069 1562 aa25.69■■□□□ 1.7
SNAP47-204ENST00000418653 UNC13AQ9UPW8 1703 aa25.42■■□□□ 1.66
SNAP47-204ENST00000418653 PABPN1Q86U42 306 aaKnown RBP eCLIP25.35■■□□□ 1.65
SNAP47-204ENST00000418653 BICRAQ9NZM4 1560 aa25.26■■□□□ 1.63
SNAP47-204ENST00000418653 MYO15BQ96JP2 1530 aa25.16■■□□□ 1.62
SNAP47-204ENST00000418653 SHROOM4Q9ULL8 1493 aa25.08■■□□□ 1.61
SNAP47-204ENST00000418653 DNAJC5Q9H3Z4 198 aa25.04■■□□□ 1.6
SNAP47-204ENST00000418653 CECR2Q9BXF3 1484 aa24.96■■□□□ 1.59
SNAP47-204ENST00000418653 CC2D2AQ9P2K1 1620 aa24.93■■□□□ 1.58
SNAP47-204ENST00000418653 DCAF8L2P0C7V8 631 aa24.89■■□□□ 1.58
SNAP47-204ENST00000418653 EIF4G1Q04637 1599 aaKnown RBP24.71■■□□□ 1.55
SNAP47-204ENST00000418653 DCAF1Q9Y4B6 1507 aa24.5■■□□□ 1.51
SNAP47-204ENST00000418653 SCRIBQ14160 1630 aa24.33■■□□□ 1.49
SNAP47-204ENST00000418653 ZCCHC6Q5VYS8 1495 aaKnown RBP24.33■■□□□ 1.49
SNAP47-204ENST00000418653 CUX2O14529 1486 aa24.29■■□□□ 1.48
SNAP47-204ENST00000418653 ERCC6Q03468 1493 aa23.89■■□□□ 1.41
SNAP47-204ENST00000418653 NCAPD3P42695 1498 aa23.67■■□□□ 1.38
SNAP47-204ENST00000418653 THOC2Q8NI27 1593 aaKnown RBP23.52■■□□□ 1.36
SNAP47-204ENST00000418653 HMGXB3Q12766 1538 aa23.5■■□□□ 1.35
SNAP47-204ENST00000418653 ATAD2BQ9ULI0 1458 aa23.42■■□□□ 1.34
SNAP47-204ENST00000418653 TRIM41Q8WV44 630 aa23.42■■□□□ 1.34
SNAP47-204ENST00000418653 SMARCA2P51531 1590 aa23.41■■□□□ 1.34
SNAP47-204ENST00000418653 NESP48681 1621 aa23.39■■□□□ 1.33
SNAP47-204ENST00000418653 LAMC3Q9Y6N6 1575 aa23.32■■□□□ 1.32
SNAP47-204ENST00000418653 SMARCA4P51532 1647 aa23.24■■□□□ 1.31
SNAP47-204ENST00000418653 KIF21AQ7Z4S6 1674 aa23.19■■□□□ 1.3
SNAP47-204ENST00000418653 BAZ1BQ9UIG0 1483 aaKnown RBP23.15■■□□□ 1.3
SNAP47-204ENST00000418653 PDS5BQ9NTI5 1447 aa23.14■■□□□ 1.29
SNAP47-204ENST00000418653 PEG3Q9GZU2 1588 aa23.11■■□□□ 1.29
SNAP47-204ENST00000418653 BAZ1AQ9NRL2 1556 aaPredicted RBP23.05■■□□□ 1.28
SNAP47-204ENST00000418653 WDR62O43379 1518 aa23.02■■□□□ 1.28
SNAP47-204ENST00000418653 MRC2Q9UBG0 1479 aa23■■□□□ 1.27
SNAP47-204ENST00000418653 CADPSQ9ULU8 1353 aa22.84■■□□□ 1.25
SNAP47-204ENST00000418653 OSCARQ8IYS5 282 aa22.84■■□□□ 1.25
SNAP47-204ENST00000418653 RIMBP3CA6NJZ7 1639 aa22.73■■□□□ 1.23
SNAP47-204ENST00000418653 RIMBP3BA6NNM3 1639 aa22.73■■□□□ 1.23
SNAP47-204ENST00000418653 RIMBP3Q9UFD9 1639 aa22.73■■□□□ 1.23
SNAP47-204ENST00000418653 CEP164Q9UPV0 1460 aa22.72■■□□□ 1.23
SNAP47-204ENST00000418653 MROH2BQ7Z745 1585 aa22.66■■□□□ 1.22
SNAP47-204ENST00000418653 FANCD2Q9BXW9 1451 aa22.58■■□□□ 1.21
SNAP47-204ENST00000418653 ARHGEF11O15085 1522 aa22.57■■□□□ 1.2
SNAP47-204ENST00000418653 CFTRP13569 1480 aa22.45■■□□□ 1.19
SNAP47-204ENST00000418653 URB2Q14146 1524 aaKnown RBP22.44■■□□□ 1.18
SNAP47-204ENST00000418653 WIZO95785 1651 aa22.34■■□□□ 1.17
SNAP47-204ENST00000418653 IFT140Q96RY7 1462 aa22.33■■□□□ 1.17
SNAP47-204ENST00000418653 PRDM2Q13029 1718 aa22.3■■□□□ 1.16
SNAP47-204ENST00000418653 AEBP2Q6ZN18 517 aaPredicted RBP22.28■■□□□ 1.16
SNAP47-204ENST00000418653 ARAP1Q96P48 1450 aa22.27■■□□□ 1.16
SNAP47-204ENST00000418653 TRHP20396 242 aaPredicted RBP22.26■■□□□ 1.15
SNAP47-204ENST00000418653 RSF1Q96T23 1441 aaPredicted RBP22.25■■□□□ 1.15
SNAP47-204ENST00000418653 CYB5RLQ6IPT4 315 aa22.25■■□□□ 1.15
SNAP47-204ENST00000418653 ZNF608Q9ULD9 1512 aaPredicted RBP22.24■■□□□ 1.15
SNAP47-204ENST00000418653 EIF4G3O43432 1585 aaKnown RBP22.2■■□□□ 1.14
SNAP47-204ENST00000418653 CHD1O14646 1710 aa22.18■■□□□ 1.14
SNAP47-204ENST00000418653 TOP2AP11388 1531 aaKnown RBP22.12■■□□□ 1.13
SNAP47-204ENST00000418653 ABCC8Q09428 1581 aa22.09■■□□□ 1.13
SNAP47-204ENST00000418653 TOPBP1Q92547 1522 aa22.08■■□□□ 1.12
SNAP47-204ENST00000418653 TARBP1Q13395 1621 aaKnown RBP21.99■■□□□ 1.11
SNAP47-204ENST00000418653 DNMBPQ6XZF7 1577 aa21.99■■□□□ 1.11
SNAP47-204ENST00000418653 CLASP1Q7Z460 1538 aa21.96■■□□□ 1.11
SNAP47-204ENST00000418653 WDR97A6NE52 1622 aa21.9■■□□□ 1.1
SNAP47-204ENST00000418653 AQRO60306 1485 aaKnown RBP eCLIP21.9■■□□□ 1.17e-7■■■■■ 29.1
SNAP47-204ENST00000418653 SYNJ1O43426 1573 aa21.86■■□□□ 1.09
SNAP47-204ENST00000418653 FBLN2P98095 1184 aa21.8■■□□□ 1.08
SNAP47-204ENST00000418653 POLA1P09884 1462 aaPredicted RBP21.79■■□□□ 1.08
SNAP47-204ENST00000418653 CCDC88BA6NC98 1476 aa21.75■■□□□ 1.07
SNAP47-204ENST00000418653 MAGI1Q96QZ7 1491 aaPredicted RBP21.75■■□□□ 1.07
SNAP47-204ENST00000418653 SNAPC4Q5SXM2 1469 aa21.74■■□□□ 1.07
SNAP47-204ENST00000418653 GAPVD1Q14C86 1478 aa21.7■■□□□ 1.06
SNAP47-204ENST00000418653 SYNJ2O15056 1496 aa21.65■■□□□ 1.06
SNAP47-204ENST00000418653 RAD54L2Q9Y4B4 1467 aa21.62■■□□□ 1.05
SNAP47-204ENST00000418653 SOGA1O94964 1423 aa21.62■■□□□ 1.05
SNAP47-204ENST00000418653 GRIN2BQ13224 1484 aa21.61■■□□□ 1.05
SNAP47-204ENST00000418653 CHMP7Q8WUX9 453 aaPredicted RBP21.61■■□□□ 1.05
SNAP47-204ENST00000418653 TDRD9Q8NDG6 1382 aaKnown RBP21.6■■□□□ 1.05
SNAP47-204ENST00000418653 FGD5Q6ZNL6 1462 aa21.51■■□□□ 1.03
SNAP47-204ENST00000418653 KIF13AQ9H1H9 1805 aa21.51■■□□□ 1.03
SNAP47-204ENST00000418653 PBRM1Q86U86 1689 aa21.51■■□□□ 1.03
SNAP47-204ENST00000418653 ILDR1Q86SU0 546 aaPredicted RBP21.42■■□□□ 1.02
SNAP47-204ENST00000418653 ERCC6L2Q5T890 1561 aa21.39■■□□□ 1.01
SNAP47-204ENST00000418653 CEP170Q5SW79 1584 aa21.38■■□□□ 1.01
SNAP47-204ENST00000418653 SHROOM2Q13796 1616 aa21.38■■□□□ 1.01
SNAP47-204ENST00000418653 ABCA5Q8WWZ7 1642 aa21.37■■□□□ 1.01
SNAP47-204ENST00000418653 CUX1P39880 1505 aa21.37■■□□□ 1.01
SNAP47-204ENST00000418653 GRIN2AQ12879 1464 aa21.33■■□□□ 1
SNAP47-204ENST00000418653 NUP160Q12769 1436 aa21.33■■□□□ 1
SNAP47-204ENST00000418653 ABCA10Q8WWZ4 1543 aa21.3■■□□□ 1
SNAP47-204ENST00000418653 ABCC10Q5T3U5 1492 aa21.27■□□□□ 0.99
SNAP47-204ENST00000418653 ADAMTS12P58397 1594 aa21.26■□□□□ 0.99
SNAP47-204ENST00000418653 MAPKBP1O60336 1514 aa21.25■□□□□ 0.99
SNAP47-204ENST00000418653 KDM4FA0A1W2PPD8 638 aa21.23■□□□□ 0.99
SNAP47-204ENST00000418653 KDM6BO15054 1643 aa21.23■□□□□ 0.99
SNAP47-204ENST00000418653 DIP2BQ9P265 1576 aa21.22■□□□□ 0.99
SNAP47-204ENST00000418653 FHAD1B1AJZ9 1412 aa21.12■□□□□ 0.97
SNAP47-204ENST00000418653 FAM69CQ0P6D2 419 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms