RNA–Protein interactions for RNA: ENST00000418431.5

NME6-204, Transcript of NME/NM23 nucleoside diphosphate kinase 6, humanhuman

TSL 3

Gene NME6, Length 794 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME6-204ENST00000418431 NISCHQ9Y2I1 1504 aa33.57■■■□□ 2.96
NME6-204ENST00000418431 ABCC9O60706 1549 aa31.45■■■□□ 2.63
NME6-204ENST00000418431 CCDC180Q9P1Z9 1646 aa30.68■■■□□ 2.5
NME6-204ENST00000418431 DNAJC5BQ9UF47 199 aa30.31■■■□□ 2.44
NME6-204ENST00000418431 RB1CC1Q8TDY2 1594 aa29.6■■■□□ 2.33
NME6-204ENST00000418431 NACADO15069 1562 aa29.13■■■□□ 2.25
NME6-204ENST00000418431 UNC13AQ9UPW8 1703 aa29.1■■■□□ 2.25
NME6-204ENST00000418431 PABPN1Q86U42 306 aaKnown RBP eCLIP29.06■■■□□ 2.24
NME6-204ENST00000418431 BICRAQ9NZM4 1560 aa28.77■■■□□ 2.2
NME6-204ENST00000418431 DCAF8L2P0C7V8 631 aa28.64■■■□□ 2.18
NME6-204ENST00000418431 DNAJC5Q9H3Z4 198 aa28.55■■■□□ 2.16
NME6-204ENST00000418431 CC2D2AQ9P2K1 1620 aa28.44■■■□□ 2.14
NME6-204ENST00000418431 CECR2Q9BXF3 1484 aa28.44■■■□□ 2.14
NME6-204ENST00000418431 MYO15BQ96JP2 1530 aa28.4■■■□□ 2.14
NME6-204ENST00000418431 SHROOM4Q9ULL8 1493 aa28.26■■■□□ 2.11
NME6-204ENST00000418431 EIF4G1Q04637 1599 aaKnown RBP28.13■■■□□ 2.09
NME6-204ENST00000418431 SCRIBQ14160 1630 aa27.81■■■□□ 2.04
NME6-204ENST00000418431 DCAF1Q9Y4B6 1507 aa27.69■■■□□ 2.02
NME6-204ENST00000418431 ZCCHC6Q5VYS8 1495 aaKnown RBP27.62■■■□□ 2.01
NME6-204ENST00000418431 CUX2O14529 1486 aa27.53■■■□□ 2
NME6-204ENST00000418431 ERCC6Q03468 1493 aa27.24■■□□□ 1.95
NME6-204ENST00000418431 TRIM41Q8WV44 630 aa26.89■■□□□ 1.9
NME6-204ENST00000418431 NCAPD3P42695 1498 aa26.86■■□□□ 1.89
NME6-204ENST00000418431 THOC2Q8NI27 1593 aaKnown RBP26.77■■□□□ 1.88
NME6-204ENST00000418431 NESP48681 1621 aa26.76■■□□□ 1.87
NME6-204ENST00000418431 ATAD2BQ9ULI0 1458 aa26.63■■□□□ 1.85
NME6-204ENST00000418431 HMGXB3Q12766 1538 aa26.63■■□□□ 1.85
NME6-204ENST00000418431 SMARCA2P51531 1590 aa26.57■■□□□ 1.84
NME6-204ENST00000418431 KIF21AQ7Z4S6 1674 aa26.54■■□□□ 1.84
NME6-204ENST00000418431 LAMC3Q9Y6N6 1575 aa26.49■■□□□ 1.83
NME6-204ENST00000418431 SMARCA4P51532 1647 aa26.45■■□□□ 1.82
NME6-204ENST00000418431 BAZ1BQ9UIG0 1483 aaKnown RBP26.35■■□□□ 1.81
NME6-204ENST00000418431 PDS5BQ9NTI5 1447 aa26.28■■□□□ 1.8
NME6-204ENST00000418431 BAZ1AQ9NRL2 1556 aaPredicted RBP26.28■■□□□ 1.8
NME6-204ENST00000418431 PEG3Q9GZU2 1588 aa26.19■■□□□ 1.78
NME6-204ENST00000418431 WDR62O43379 1518 aa26.14■■□□□ 1.77
NME6-204ENST00000418431 MRC2Q9UBG0 1479 aa26.13■■□□□ 1.77
NME6-204ENST00000418431 OSCARQ8IYS5 282 aa26.04■■□□□ 1.76
NME6-204ENST00000418431 CADPSQ9ULU8 1353 aa25.96■■□□□ 1.75
NME6-204ENST00000418431 RIMBP3CA6NJZ7 1639 aa25.96■■□□□ 1.75
NME6-204ENST00000418431 RIMBP3BA6NNM3 1639 aa25.96■■□□□ 1.75
NME6-204ENST00000418431 RIMBP3Q9UFD9 1639 aa25.96■■□□□ 1.75
NME6-204ENST00000418431 MROH2BQ7Z745 1585 aa25.85■■□□□ 1.73
NME6-204ENST00000418431 CEP164Q9UPV0 1460 aa25.85■■□□□ 1.73
NME6-204ENST00000418431 ARHGEF11O15085 1522 aa25.71■■□□□ 1.71
NME6-204ENST00000418431 FANCD2Q9BXW9 1451 aa25.71■■□□□ 1.71
NME6-204ENST00000418431 URB2Q14146 1524 aaKnown RBP25.58■■□□□ 1.68
NME6-204ENST00000418431 WIZO95785 1651 aa25.57■■□□□ 1.68
NME6-204ENST00000418431 TRHP20396 242 aaPredicted RBP25.54■■□□□ 1.68
NME6-204ENST00000418431 AEBP2Q6ZN18 517 aaPredicted RBP25.52■■□□□ 1.68
NME6-204ENST00000418431 CFTRP13569 1480 aa25.5■■□□□ 1.67
NME6-204ENST00000418431 CYB5RLQ6IPT4 315 aa25.5■■□□□ 1.67
NME6-204ENST00000418431 PRDM2Q13029 1718 aa25.42■■□□□ 1.66
NME6-204ENST00000418431 ZNF608Q9ULD9 1512 aaPredicted RBP25.4■■□□□ 1.66
NME6-204ENST00000418431 CHD1O14646 1710 aa25.37■■□□□ 1.65
NME6-204ENST00000418431 ARAP1Q96P48 1450 aa25.37■■□□□ 1.65
NME6-204ENST00000418431 IFT140Q96RY7 1462 aa25.34■■□□□ 1.65
NME6-204ENST00000418431 EIF4G3O43432 1585 aaKnown RBP25.3■■□□□ 1.64
NME6-204ENST00000418431 RSF1Q96T23 1441 aaPredicted RBP25.21■■□□□ 1.63
NME6-204ENST00000418431 TOP2AP11388 1531 aaKnown RBP25.13■■□□□ 1.61
NME6-204ENST00000418431 TOPBP1Q92547 1522 aa25.13■■□□□ 1.61
NME6-204ENST00000418431 TARBP1Q13395 1621 aaKnown RBP25.04■■□□□ 1.6
NME6-204ENST00000418431 AQRO60306 1485 aaKnown RBP eCLIP25.02■■□□□ 1.62e-6■■■□□ 18.3
NME6-204ENST00000418431 ABCC8Q09428 1581 aa25.02■■□□□ 1.6
NME6-204ENST00000418431 FBLN2P98095 1184 aa25.02■■□□□ 1.6
NME6-204ENST00000418431 DNMBPQ6XZF7 1577 aa24.99■■□□□ 1.59
NME6-204ENST00000418431 CLASP1Q7Z460 1538 aa24.95■■□□□ 1.58
NME6-204ENST00000418431 SYNJ1O43426 1573 aa24.85■■□□□ 1.57
NME6-204ENST00000418431 CCDC88BA6NC98 1476 aa24.81■■□□□ 1.56
NME6-204ENST00000418431 POLA1P09884 1462 aaPredicted RBP24.81■■□□□ 1.56
NME6-204ENST00000418431 SNAPC4Q5SXM2 1469 aa24.77■■□□□ 1.56
NME6-204ENST00000418431 WDR97A6NE52 1622 aa24.74■■□□□ 1.55
NME6-204ENST00000418431 GAPVD1Q14C86 1478 aa24.71■■□□□ 1.55
NME6-204ENST00000418431 RAD54L2Q9Y4B4 1467 aa24.7■■□□□ 1.55
NME6-204ENST00000418431 TDRD9Q8NDG6 1382 aaKnown RBP24.69■■□□□ 1.54
NME6-204ENST00000418431 CHMP7Q8WUX9 453 aaPredicted RBP24.69■■□□□ 1.54
NME6-204ENST00000418431 MAGI1Q96QZ7 1491 aaPredicted RBP24.68■■□□□ 1.54
NME6-204ENST00000418431 SOGA1O94964 1423 aa24.64■■□□□ 1.54
NME6-204ENST00000418431 KIF13AQ9H1H9 1805 aa24.61■■□□□ 1.53
NME6-204ENST00000418431 SYNJ2O15056 1496 aa24.61■■□□□ 1.53
NME6-204ENST00000418431 PBRM1Q86U86 1689 aa24.56■■□□□ 1.52
NME6-204ENST00000418431 GRIN2BQ13224 1484 aa24.56■■□□□ 1.52
NME6-204ENST00000418431 ILDR1Q86SU0 546 aaPredicted RBP24.54■■□□□ 1.52
NME6-204ENST00000418431 FGD5Q6ZNL6 1462 aa24.51■■□□□ 1.51
NME6-204ENST00000418431 ERCC6L2Q5T890 1561 aa24.47■■□□□ 1.51
NME6-204ENST00000418431 CEP170Q5SW79 1584 aa24.35■■□□□ 1.49
NME6-204ENST00000418431 CUX1P39880 1505 aa24.35■■□□□ 1.49
NME6-204ENST00000418431 ABCA5Q8WWZ7 1642 aa24.31■■□□□ 1.48
NME6-204ENST00000418431 SHROOM2Q13796 1616 aa24.3■■□□□ 1.48
NME6-204ENST00000418431 KDM4FA0A1W2PPD8 638 aa24.28■■□□□ 1.48
NME6-204ENST00000418431 GRIN2AQ12879 1464 aa24.26■■□□□ 1.47
NME6-204ENST00000418431 KDM6BO15054 1643 aa24.21■■□□□ 1.47
NME6-204ENST00000418431 NUP160Q12769 1436 aa24.19■■□□□ 1.46
NME6-204ENST00000418431 ABCA10Q8WWZ4 1543 aa24.18■■□□□ 1.46
NME6-204ENST00000418431 ABCC10Q5T3U5 1492 aa24.18■■□□□ 1.46
NME6-204ENST00000418431 ADAMTS12P58397 1594 aa24.17■■□□□ 1.46
NME6-204ENST00000418431 DIP2BQ9P265 1576 aa24.16■■□□□ 1.46
NME6-204ENST00000418431 TSPOAP1O95153 1857 aa24.15■■□□□ 1.46
NME6-204ENST00000418431 FAM69CQ0P6D2 419 aa24.14■■□□□ 1.45
NME6-204ENST00000418431 MAPKBP1O60336 1514 aa24.1■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms