RNA–Protein interactions for RNA: ENST00000417977.2

TRBV30-201, Transcript of T cell receptor beta variable 30 (gene/pseudogene), humanhuman

APPRIS P1 BASIC

Gene TRBV30, Length 447 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV30-201ENST00000417977 NISCHQ9Y2I1 1504 aa21.12■□□□□ 0.97
TRBV30-201ENST00000417977 ABCC9O60706 1549 aa19.63■□□□□ 0.73
TRBV30-201ENST00000417977 CCDC180Q9P1Z9 1646 aa19.04■□□□□ 0.64
TRBV30-201ENST00000417977 DNAJC5BQ9UF47 199 aa18.85■□□□□ 0.61
TRBV30-201ENST00000417977 RB1CC1Q8TDY2 1594 aa18.47■□□□□ 0.55
TRBV30-201ENST00000417977 PABPN1Q86U42 306 aaKnown RBP eCLIP18.3■□□□□ 0.52
TRBV30-201ENST00000417977 DCAF8L2P0C7V8 631 aa18.28■□□□□ 0.52
TRBV30-201ENST00000417977 NACADO15069 1562 aa18.24■□□□□ 0.51
TRBV30-201ENST00000417977 MYO15BQ96JP2 1530 aa17.83■□□□□ 0.45
TRBV30-201ENST00000417977 BICRAQ9NZM4 1560 aa17.83■□□□□ 0.44
TRBV30-201ENST00000417977 UNC13AQ9UPW8 1703 aa17.8■□□□□ 0.44
TRBV30-201ENST00000417977 CECR2Q9BXF3 1484 aa17.76■□□□□ 0.43
TRBV30-201ENST00000417977 DNAJC5Q9H3Z4 198 aa17.75■□□□□ 0.43
TRBV30-201ENST00000417977 SHROOM4Q9ULL8 1493 aa17.67■□□□□ 0.42
TRBV30-201ENST00000417977 CC2D2AQ9P2K1 1620 aa17.64■□□□□ 0.41
TRBV30-201ENST00000417977 EIF4G1Q04637 1599 aaKnown RBP17.49■□□□□ 0.39
TRBV30-201ENST00000417977 DCAF1Q9Y4B6 1507 aa17.42■□□□□ 0.38
TRBV30-201ENST00000417977 ZCCHC6Q5VYS8 1495 aaKnown RBP17.37■□□□□ 0.37
TRBV30-201ENST00000417977 SCRIBQ14160 1630 aa17.36■□□□□ 0.37
TRBV30-201ENST00000417977 CUX2O14529 1486 aa17.13■□□□□ 0.33
TRBV30-201ENST00000417977 ERCC6Q03468 1493 aa17.05■□□□□ 0.32
TRBV30-201ENST00000417977 NCAPD3P42695 1498 aa16.88■□□□□ 0.29
TRBV30-201ENST00000417977 TRIM41Q8WV44 630 aa16.8■□□□□ 0.28
TRBV30-201ENST00000417977 ATAD2BQ9ULI0 1458 aa16.73■□□□□ 0.27
TRBV30-201ENST00000417977 NESP48681 1621 aa16.68■□□□□ 0.26
TRBV30-201ENST00000417977 SMARCA2P51531 1590 aa16.67■□□□□ 0.26
TRBV30-201ENST00000417977 HMGXB3Q12766 1538 aa16.63■□□□□ 0.25
TRBV30-201ENST00000417977 PDS5BQ9NTI5 1447 aa16.57■□□□□ 0.24
TRBV30-201ENST00000417977 BAZ1BQ9UIG0 1483 aaKnown RBP16.56■□□□□ 0.24
TRBV30-201ENST00000417977 THOC2Q8NI27 1593 aaKnown RBP16.51■□□□□ 0.23
TRBV30-201ENST00000417977 LAMC3Q9Y6N6 1575 aa16.51■□□□□ 0.23
TRBV30-201ENST00000417977 SMARCA4P51532 1647 aa16.51■□□□□ 0.23
TRBV30-201ENST00000417977 BAZ1AQ9NRL2 1556 aaPredicted RBP16.44■□□□□ 0.22
TRBV30-201ENST00000417977 OSCARQ8IYS5 282 aa16.43■□□□□ 0.22
TRBV30-201ENST00000417977 CADPSQ9ULU8 1353 aa16.39■□□□□ 0.21
TRBV30-201ENST00000417977 MRC2Q9UBG0 1479 aa16.35■□□□□ 0.21
TRBV30-201ENST00000417977 PEG3Q9GZU2 1588 aa16.35■□□□□ 0.21
TRBV30-201ENST00000417977 KIF21AQ7Z4S6 1674 aa16.33■□□□□ 0.2
TRBV30-201ENST00000417977 WDR62O43379 1518 aa16.27■□□□□ 0.2
TRBV30-201ENST00000417977 MROH2BQ7Z745 1585 aa16.24■□□□□ 0.19
TRBV30-201ENST00000417977 CEP164Q9UPV0 1460 aa16.21■□□□□ 0.19
TRBV30-201ENST00000417977 FANCD2Q9BXW9 1451 aa16.15■□□□□ 0.18
TRBV30-201ENST00000417977 TRHP20396 242 aaPredicted RBP16.07■□□□□ 0.16
TRBV30-201ENST00000417977 CYB5RLQ6IPT4 315 aa16.06■□□□□ 0.16
TRBV30-201ENST00000417977 CFTRP13569 1480 aa16.04■□□□□ 0.16
TRBV30-201ENST00000417977 RIMBP3CA6NJZ7 1639 aa16.01■□□□□ 0.15
TRBV30-201ENST00000417977 RIMBP3BA6NNM3 1639 aa16.01■□□□□ 0.15
TRBV30-201ENST00000417977 RIMBP3Q9UFD9 1639 aa16.01■□□□□ 0.15
TRBV30-201ENST00000417977 AEBP2Q6ZN18 517 aaPredicted RBP15.99■□□□□ 0.15
TRBV30-201ENST00000417977 URB2Q14146 1524 aaKnown RBP15.98■□□□□ 0.15
TRBV30-201ENST00000417977 WIZO95785 1651 aa15.97■□□□□ 0.15
TRBV30-201ENST00000417977 ARHGEF11O15085 1522 aa15.97■□□□□ 0.15
TRBV30-201ENST00000417977 IFT140Q96RY7 1462 aa15.92■□□□□ 0.14
TRBV30-201ENST00000417977 FBLN2P98095 1184 aa15.88■□□□□ 0.13
TRBV30-201ENST00000417977 ZNF608Q9ULD9 1512 aaPredicted RBP15.87■□□□□ 0.13
TRBV30-201ENST00000417977 RSF1Q96T23 1441 aaPredicted RBP15.8■□□□□ 0.12
TRBV30-201ENST00000417977 ABCC8Q09428 1581 aa15.79■□□□□ 0.12
TRBV30-201ENST00000417977 TOP2AP11388 1531 aaKnown RBP15.78■□□□□ 0.12
TRBV30-201ENST00000417977 ARAP1Q96P48 1450 aa15.77■□□□□ 0.11
TRBV30-201ENST00000417977 TOPBP1Q92547 1522 aa15.76■□□□□ 0.11
TRBV30-201ENST00000417977 AQRO60306 1485 aaKnown RBP eCLIP15.74■□□□□ 0.11
TRBV30-201ENST00000417977 EIF4G3O43432 1585 aaKnown RBP15.69■□□□□ 0.1
TRBV30-201ENST00000417977 CHMP7Q8WUX9 453 aaPredicted RBP15.68■□□□□ 0.1
TRBV30-201ENST00000417977 CCDC88BA6NC98 1476 aa15.67■□□□□ 0.1
TRBV30-201ENST00000417977 DNMBPQ6XZF7 1577 aa15.63■□□□□ 0.09
TRBV30-201ENST00000417977 PRDM2Q13029 1718 aa15.62■□□□□ 0.09
TRBV30-201ENST00000417977 CHD1O14646 1710 aa15.6■□□□□ 0.09
TRBV30-201ENST00000417977 TDRD9Q8NDG6 1382 aaKnown RBP15.6■□□□□ 0.09
TRBV30-201ENST00000417977 SOGA1O94964 1423 aa15.59■□□□□ 0.09
TRBV30-201ENST00000417977 POLA1P09884 1462 aaPredicted RBP15.57■□□□□ 0.08
TRBV30-201ENST00000417977 TARBP1Q13395 1621 aaKnown RBP15.56■□□□□ 0.08
TRBV30-201ENST00000417977 RAD54L2Q9Y4B4 1467 aa15.53■□□□□ 0.08
TRBV30-201ENST00000417977 SYNJ1O43426 1573 aa15.53■□□□□ 0.08
TRBV30-201ENST00000417977 SNAPC4Q5SXM2 1469 aa15.52■□□□□ 0.08
TRBV30-201ENST00000417977 MAGI1Q96QZ7 1491 aaPredicted RBP15.49■□□□□ 0.07
TRBV30-201ENST00000417977 CLASP1Q7Z460 1538 aa15.48■□□□□ 0.07
TRBV30-201ENST00000417977 GAPVD1Q14C86 1478 aa15.47■□□□□ 0.07
TRBV30-201ENST00000417977 GRIN2BQ13224 1484 aa15.46■□□□□ 0.07
TRBV30-201ENST00000417977 SYNJ2O15056 1496 aa15.45■□□□□ 0.06
TRBV30-201ENST00000417977 WDR97A6NE52 1622 aa15.44■□□□□ 0.06
TRBV30-201ENST00000417977 FGD5Q6ZNL6 1462 aa15.4■□□□□ 0.06
TRBV30-201ENST00000417977 NPM1P06748 294 aaKnown RBP eCLIP15.29■□□□□ 0.04
TRBV30-201ENST00000417977 CUX1P39880 1505 aa15.28■□□□□ 0.04
TRBV30-201ENST00000417977 FAM69CQ0P6D2 419 aa15.25■□□□□ 0.03
TRBV30-201ENST00000417977 ABCA10Q8WWZ4 1543 aa15.22■□□□□ 0.03
TRBV30-201ENST00000417977 GRIN2AQ12879 1464 aa15.22■□□□□ 0.03
TRBV30-201ENST00000417977 ILDR1Q86SU0 546 aaPredicted RBP15.22■□□□□ 0.03
TRBV30-201ENST00000417977 NUP160Q12769 1436 aa15.19■□□□□ 0.02
TRBV30-201ENST00000417977 CEP170Q5SW79 1584 aa15.19■□□□□ 0.02
TRBV30-201ENST00000417977 ERCC6L2Q5T890 1561 aa15.19■□□□□ 0.02
TRBV30-201ENST00000417977 JPH4Q96JJ6 628 aa15.18■□□□□ 0.02
TRBV30-201ENST00000417977 PBRM1Q86U86 1689 aa15.18■□□□□ 0.02
TRBV30-201ENST00000417977 KDM4FA0A1W2PPD8 638 aa15.17■□□□□ 0.02
TRBV30-201ENST00000417977 FHAD1B1AJZ9 1412 aa15.16■□□□□ 0.02
TRBV30-201ENST00000417977 WRNQ14191 1432 aaPredicted RBP eCLIP15.15■□□□□ 0.02
TRBV30-201ENST00000417977 PRG4Q92954 1404 aaPredicted RBP15.15■□□□□ 0.02
TRBV30-201ENST00000417977 ABCA5Q8WWZ7 1642 aa15.13■□□□□ 0.01
TRBV30-201ENST00000417977 ABCC10Q5T3U5 1492 aa15.13■□□□□ 0.01
TRBV30-201ENST00000417977 SHROOM2Q13796 1616 aa15.07■□□□□ 0
TRBV30-201ENST00000417977 ADAMTS12P58397 1594 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms