RNA–Protein interactions for RNA: ENST00000417851.2

SLC38A3-202, Transcript of solute carrier family 38 member 3, humanhuman

TSL 3

Gene SLC38A3, Length 438 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A3-202ENST00000417851 NISCHQ9Y2I1 1504 aa33.73■■■□□ 2.99
SLC38A3-202ENST00000417851 ABCC9O60706 1549 aa31.39■■■□□ 2.61
SLC38A3-202ENST00000417851 CCDC180Q9P1Z9 1646 aa30.58■■■□□ 2.49
SLC38A3-202ENST00000417851 DNAJC5BQ9UF47 199 aa30.04■■■□□ 2.4
SLC38A3-202ENST00000417851 RB1CC1Q8TDY2 1594 aa29.46■■■□□ 2.31
SLC38A3-202ENST00000417851 PABPN1Q86U42 306 aaKnown RBP eCLIP29.09■■■□□ 2.25
SLC38A3-202ENST00000417851 NACADO15069 1562 aa29.04■■■□□ 2.24
SLC38A3-202ENST00000417851 UNC13AQ9UPW8 1703 aa28.91■■■□□ 2.22
SLC38A3-202ENST00000417851 DCAF8L2P0C7V8 631 aa28.84■■■□□ 2.21
SLC38A3-202ENST00000417851 BICRAQ9NZM4 1560 aa28.69■■■□□ 2.18
SLC38A3-202ENST00000417851 MYO15BQ96JP2 1530 aa28.32■■■□□ 2.12
SLC38A3-202ENST00000417851 CC2D2AQ9P2K1 1620 aa28.29■■■□□ 2.12
SLC38A3-202ENST00000417851 CECR2Q9BXF3 1484 aa28.29■■■□□ 2.12
SLC38A3-202ENST00000417851 SHROOM4Q9ULL8 1493 aa28.06■■■□□ 2.08
SLC38A3-202ENST00000417851 EIF4G1Q04637 1599 aaKnown RBP28.03■■■□□ 2.08
SLC38A3-202ENST00000417851 DNAJC5Q9H3Z4 198 aa28.01■■■□□ 2.07
SLC38A3-202ENST00000417851 SCRIBQ14160 1630 aa27.96■■■□□ 2.07
SLC38A3-202ENST00000417851 ZCCHC6Q5VYS8 1495 aaKnown RBP27.82■■■□□ 2.04
SLC38A3-202ENST00000417851 DCAF1Q9Y4B6 1507 aa27.72■■■□□ 2.03
SLC38A3-202ENST00000417851 CUX2O14529 1486 aa27.23■■□□□ 1.95
SLC38A3-202ENST00000417851 ERCC6Q03468 1493 aa27.12■■□□□ 1.93
SLC38A3-202ENST00000417851 NCAPD3P42695 1498 aa26.8■■□□□ 1.88
SLC38A3-202ENST00000417851 NESP48681 1621 aa26.77■■□□□ 1.88
SLC38A3-202ENST00000417851 ATAD2BQ9ULI0 1458 aa26.67■■□□□ 1.86
SLC38A3-202ENST00000417851 TRIM41Q8WV44 630 aa26.64■■□□□ 1.86
SLC38A3-202ENST00000417851 THOC2Q8NI27 1593 aaKnown RBP26.63■■□□□ 1.85
SLC38A3-202ENST00000417851 HMGXB3Q12766 1538 aa26.58■■□□□ 1.85
SLC38A3-202ENST00000417851 SMARCA2P51531 1590 aa26.54■■□□□ 1.84
SLC38A3-202ENST00000417851 SMARCA4P51532 1647 aa26.52■■□□□ 1.84
SLC38A3-202ENST00000417851 KIF21AQ7Z4S6 1674 aa26.42■■□□□ 1.82
SLC38A3-202ENST00000417851 BAZ1BQ9UIG0 1483 aaKnown RBP26.4■■□□□ 1.82
SLC38A3-202ENST00000417851 LAMC3Q9Y6N6 1575 aa26.36■■□□□ 1.81
SLC38A3-202ENST00000417851 BAZ1AQ9NRL2 1556 aaPredicted RBP26.21■■□□□ 1.79
SLC38A3-202ENST00000417851 PDS5BQ9NTI5 1447 aa26.19■■□□□ 1.78
SLC38A3-202ENST00000417851 PEG3Q9GZU2 1588 aa26.17■■□□□ 1.78
SLC38A3-202ENST00000417851 MRC2Q9UBG0 1479 aa26.08■■□□□ 1.77
SLC38A3-202ENST00000417851 WDR62O43379 1518 aa26.04■■□□□ 1.76
SLC38A3-202ENST00000417851 MROH2BQ7Z745 1585 aa26.04■■□□□ 1.76
SLC38A3-202ENST00000417851 CADPSQ9ULU8 1353 aa25.96■■□□□ 1.75
SLC38A3-202ENST00000417851 CEP164Q9UPV0 1460 aa25.84■■□□□ 1.73
SLC38A3-202ENST00000417851 OSCARQ8IYS5 282 aa25.82■■□□□ 1.72
SLC38A3-202ENST00000417851 WIZO95785 1651 aa25.74■■□□□ 1.71
SLC38A3-202ENST00000417851 FANCD2Q9BXW9 1451 aa25.73■■□□□ 1.71
SLC38A3-202ENST00000417851 RIMBP3CA6NJZ7 1639 aa25.73■■□□□ 1.71
SLC38A3-202ENST00000417851 RIMBP3BA6NNM3 1639 aa25.73■■□□□ 1.71
SLC38A3-202ENST00000417851 RIMBP3Q9UFD9 1639 aa25.73■■□□□ 1.71
SLC38A3-202ENST00000417851 URB2Q14146 1524 aaKnown RBP25.6■■□□□ 1.69
SLC38A3-202ENST00000417851 CFTRP13569 1480 aa25.53■■□□□ 1.68
SLC38A3-202ENST00000417851 ARHGEF11O15085 1522 aa25.53■■□□□ 1.68
SLC38A3-202ENST00000417851 ZNF608Q9ULD9 1512 aaPredicted RBP25.42■■□□□ 1.66
SLC38A3-202ENST00000417851 CYB5RLQ6IPT4 315 aa25.36■■□□□ 1.65
SLC38A3-202ENST00000417851 TRHP20396 242 aaPredicted RBP25.34■■□□□ 1.65
SLC38A3-202ENST00000417851 IFT140Q96RY7 1462 aa25.3■■□□□ 1.64
SLC38A3-202ENST00000417851 PRDM2Q13029 1718 aa25.29■■□□□ 1.64
SLC38A3-202ENST00000417851 TOP2AP11388 1531 aaKnown RBP25.28■■□□□ 1.64
SLC38A3-202ENST00000417851 EIF4G3O43432 1585 aaKnown RBP25.27■■□□□ 1.64
SLC38A3-202ENST00000417851 ARAP1Q96P48 1450 aa25.25■■□□□ 1.63
SLC38A3-202ENST00000417851 CHD1O14646 1710 aa25.24■■□□□ 1.63
SLC38A3-202ENST00000417851 RSF1Q96T23 1441 aaPredicted RBP25.18■■□□□ 1.62
SLC38A3-202ENST00000417851 TOPBP1Q92547 1522 aa25.17■■□□□ 1.62
SLC38A3-202ENST00000417851 AEBP2Q6ZN18 517 aaPredicted RBP25.1■■□□□ 1.61
SLC38A3-202ENST00000417851 AQRO60306 1485 aaKnown RBP eCLIP25.08■■□□□ 1.61e-9■□□□□ 9.9
SLC38A3-202ENST00000417851 FBLN2P98095 1184 aa25.06■■□□□ 1.6
SLC38A3-202ENST00000417851 DNMBPQ6XZF7 1577 aa25.02■■□□□ 1.6
SLC38A3-202ENST00000417851 TARBP1Q13395 1621 aaKnown RBP25.02■■□□□ 1.6
SLC38A3-202ENST00000417851 CCDC88BA6NC98 1476 aa25■■□□□ 1.59
SLC38A3-202ENST00000417851 ABCC8Q09428 1581 aa24.94■■□□□ 1.58
SLC38A3-202ENST00000417851 POLA1P09884 1462 aaPredicted RBP24.88■■□□□ 1.57
SLC38A3-202ENST00000417851 CLASP1Q7Z460 1538 aa24.86■■□□□ 1.57
SLC38A3-202ENST00000417851 RAD54L2Q9Y4B4 1467 aa24.84■■□□□ 1.57
SLC38A3-202ENST00000417851 SNAPC4Q5SXM2 1469 aa24.83■■□□□ 1.56
SLC38A3-202ENST00000417851 TDRD9Q8NDG6 1382 aaKnown RBP24.8■■□□□ 1.56
SLC38A3-202ENST00000417851 SYNJ1O43426 1573 aa24.76■■□□□ 1.55
SLC38A3-202ENST00000417851 SOGA1O94964 1423 aa24.7■■□□□ 1.55
SLC38A3-202ENST00000417851 CHMP7Q8WUX9 453 aaPredicted RBP24.68■■□□□ 1.54
SLC38A3-202ENST00000417851 GAPVD1Q14C86 1478 aa24.64■■□□□ 1.53
SLC38A3-202ENST00000417851 FGD5Q6ZNL6 1462 aa24.64■■□□□ 1.53
SLC38A3-202ENST00000417851 MAGI1Q96QZ7 1491 aaPredicted RBP24.64■■□□□ 1.53
SLC38A3-202ENST00000417851 WDR97A6NE52 1622 aa24.61■■□□□ 1.53
SLC38A3-202ENST00000417851 SYNJ2O15056 1496 aa24.58■■□□□ 1.53
SLC38A3-202ENST00000417851 GRIN2BQ13224 1484 aa24.58■■□□□ 1.52
SLC38A3-202ENST00000417851 PBRM1Q86U86 1689 aa24.54■■□□□ 1.52
SLC38A3-202ENST00000417851 ERCC6L2Q5T890 1561 aa24.51■■□□□ 1.51
SLC38A3-202ENST00000417851 CUX1P39880 1505 aa24.51■■□□□ 1.51
SLC38A3-202ENST00000417851 KIF13AQ9H1H9 1805 aa24.36■■□□□ 1.49
SLC38A3-202ENST00000417851 ABCA5Q8WWZ7 1642 aa24.35■■□□□ 1.49
SLC38A3-202ENST00000417851 CEP170Q5SW79 1584 aa24.33■■□□□ 1.49
SLC38A3-202ENST00000417851 GRIN2AQ12879 1464 aa24.3■■□□□ 1.48
SLC38A3-202ENST00000417851 ABCA10Q8WWZ4 1543 aa24.25■■□□□ 1.47
SLC38A3-202ENST00000417851 ADAMTS12P58397 1594 aa24.24■■□□□ 1.47
SLC38A3-202ENST00000417851 SHROOM2Q13796 1616 aa24.21■■□□□ 1.47
SLC38A3-202ENST00000417851 NUP160Q12769 1436 aa24.2■■□□□ 1.46
SLC38A3-202ENST00000417851 ILDR1Q86SU0 546 aaPredicted RBP24.12■■□□□ 1.45
SLC38A3-202ENST00000417851 KDM4FA0A1W2PPD8 638 aa24.07■■□□□ 1.44
SLC38A3-202ENST00000417851 FAM69CQ0P6D2 419 aa24.07■■□□□ 1.44
SLC38A3-202ENST00000417851 PRG4Q92954 1404 aaPredicted RBP24.06■■□□□ 1.44
SLC38A3-202ENST00000417851 ABCC10Q5T3U5 1492 aa24.05■■□□□ 1.44
SLC38A3-202ENST00000417851 DIP2BQ9P265 1576 aa24.04■■□□□ 1.44
SLC38A3-202ENST00000417851 KDM6BO15054 1643 aa24.04■■□□□ 1.44
SLC38A3-202ENST00000417851 FHAD1B1AJZ9 1412 aa24.03■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 190.9 ms