RNA–Protein interactions for RNA: ENST00000417688.5

XPNPEP3-202, Transcript of X-prolyl aminopeptidase 3, humanhuman

TSL 3

Gene XPNPEP3, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPNPEP3-202ENST00000417688 NISCHQ9Y2I1 1504 aa24.15■■□□□ 1.46
XPNPEP3-202ENST00000417688 ABCC9O60706 1549 aa23.42■■□□□ 1.34
XPNPEP3-202ENST00000417688 DNAJC5BQ9UF47 199 aa23.12■■□□□ 1.29
XPNPEP3-202ENST00000417688 CCDC180Q9P1Z9 1646 aa22.14■■□□□ 1.14
XPNPEP3-202ENST00000417688 DNAJC5Q9H3Z4 198 aa22.09■■□□□ 1.13
XPNPEP3-202ENST00000417688 AEBP2Q6ZN18 517 aaPredicted RBP21.88■■□□□ 1.09
XPNPEP3-202ENST00000417688 RB1CC1Q8TDY2 1594 aa21.7■■□□□ 1.06
XPNPEP3-202ENST00000417688 PABPN1Q86U42 306 aaKnown RBP eCLIP21.66■■□□□ 1.06
XPNPEP3-202ENST00000417688 NACADO15069 1562 aa21.26■□□□□ 0.99
XPNPEP3-202ENST00000417688 UNC13AQ9UPW8 1703 aa21.21■□□□□ 0.99
XPNPEP3-202ENST00000417688 CECR2Q9BXF3 1484 aa21.21■□□□□ 0.99
XPNPEP3-202ENST00000417688 BICRAQ9NZM4 1560 aa21.14■□□□□ 0.97
XPNPEP3-202ENST00000417688 CHIC1Q5VXU3 224 aa21.07■□□□□ 0.96
XPNPEP3-202ENST00000417688 CC2D2AQ9P2K1 1620 aa21.07■□□□□ 0.96
XPNPEP3-202ENST00000417688 DCAF8L2P0C7V8 631 aa21.01■□□□□ 0.95
XPNPEP3-202ENST00000417688 EIF4G1Q04637 1599 aaKnown RBP20.72■□□□□ 0.91
XPNPEP3-202ENST00000417688 SHROOM4Q9ULL8 1493 aa20.67■□□□□ 0.9
XPNPEP3-202ENST00000417688 CUX2O14529 1486 aa20.65■□□□□ 0.9
XPNPEP3-202ENST00000417688 TRIM41Q8WV44 630 aa20.64■□□□□ 0.89
XPNPEP3-202ENST00000417688 MYO15BQ96JP2 1530 aa20.54■□□□□ 0.88
XPNPEP3-202ENST00000417688 ERCC6Q03468 1493 aa20.29■□□□□ 0.84
XPNPEP3-202ENST00000417688 SCRIBQ14160 1630 aa20.17■□□□□ 0.82
XPNPEP3-202ENST00000417688 DCAF1Q9Y4B6 1507 aa19.84■□□□□ 0.77
XPNPEP3-202ENST00000417688 NESP48681 1621 aa19.78■□□□□ 0.76
XPNPEP3-202ENST00000417688 THOC2Q8NI27 1593 aaKnown RBP19.77■□□□□ 0.76
XPNPEP3-202ENST00000417688 ZCCHC6Q5VYS8 1495 aaKnown RBP19.73■□□□□ 0.75
XPNPEP3-202ENST00000417688 NCAPD3P42695 1498 aa19.67■□□□□ 0.74
XPNPEP3-202ENST00000417688 OSCARQ8IYS5 282 aa19.57■□□□□ 0.72
XPNPEP3-202ENST00000417688 SMARCA2P51531 1590 aa19.56■□□□□ 0.72
XPNPEP3-202ENST00000417688 BAZ1AQ9NRL2 1556 aaPredicted RBP19.49■□□□□ 0.71
XPNPEP3-202ENST00000417688 ATAD2BQ9ULI0 1458 aa19.44■□□□□ 0.7
XPNPEP3-202ENST00000417688 KIF21AQ7Z4S6 1674 aa19.43■□□□□ 0.7
XPNPEP3-202ENST00000417688 RIMBP3CA6NJZ7 1639 aa19.4■□□□□ 0.7
XPNPEP3-202ENST00000417688 RIMBP3BA6NNM3 1639 aa19.4■□□□□ 0.7
XPNPEP3-202ENST00000417688 RIMBP3Q9UFD9 1639 aa19.4■□□□□ 0.7
XPNPEP3-202ENST00000417688 TRHP20396 242 aaPredicted RBP19.39■□□□□ 0.69
XPNPEP3-202ENST00000417688 LAMC3Q9Y6N6 1575 aa19.39■□□□□ 0.69
XPNPEP3-202ENST00000417688 HMGXB3Q12766 1538 aa19.37■□□□□ 0.69
XPNPEP3-202ENST00000417688 PDS5BQ9NTI5 1447 aa19.34■□□□□ 0.69
XPNPEP3-202ENST00000417688 MRC2Q9UBG0 1479 aa19.25■□□□□ 0.67
XPNPEP3-202ENST00000417688 WDR62O43379 1518 aa19.23■□□□□ 0.67
XPNPEP3-202ENST00000417688 ARHGEF11O15085 1522 aa19.21■□□□□ 0.67
XPNPEP3-202ENST00000417688 CYB5RLQ6IPT4 315 aa19.21■□□□□ 0.67
XPNPEP3-202ENST00000417688 BAZ1BQ9UIG0 1483 aaKnown RBP19.17■□□□□ 0.66
XPNPEP3-202ENST00000417688 ILDR1Q86SU0 546 aaPredicted RBP19.12■□□□□ 0.65
XPNPEP3-202ENST00000417688 SMARCA4P51532 1647 aa19.08■□□□□ 0.65
XPNPEP3-202ENST00000417688 CADPSQ9ULU8 1353 aa19.03■□□□□ 0.64
XPNPEP3-202ENST00000417688 ARAP1Q96P48 1450 aa18.94■□□□□ 0.62
XPNPEP3-202ENST00000417688 CEP164Q9UPV0 1460 aa18.91■□□□□ 0.62
XPNPEP3-202ENST00000417688 PEG3Q9GZU2 1588 aa18.89■□□□□ 0.62
XPNPEP3-202ENST00000417688 FANCD2Q9BXW9 1451 aa18.8■□□□□ 0.6
XPNPEP3-202ENST00000417688 URB2Q14146 1524 aaKnown RBP18.73■□□□□ 0.59
XPNPEP3-202ENST00000417688 ZNF608Q9ULD9 1512 aaPredicted RBP18.71■□□□□ 0.59
XPNPEP3-202ENST00000417688 SENP3Q9H4L4 574 aaPredicted RBP18.71■□□□□ 0.59
XPNPEP3-202ENST00000417688 RSF1Q96T23 1441 aaPredicted RBP18.69■□□□□ 0.58
XPNPEP3-202ENST00000417688 MROH2BQ7Z745 1585 aa18.61■□□□□ 0.57
XPNPEP3-202ENST00000417688 CHD1O14646 1710 aa18.6■□□□□ 0.57
XPNPEP3-202ENST00000417688 IFT140Q96RY7 1462 aa18.59■□□□□ 0.57
XPNPEP3-202ENST00000417688 FBLN2P98095 1184 aa18.56■□□□□ 0.56
XPNPEP3-202ENST00000417688 CFTRP13569 1480 aa18.53■□□□□ 0.56
XPNPEP3-202ENST00000417688 EIF4G3O43432 1585 aaKnown RBP18.5■□□□□ 0.55
XPNPEP3-202ENST00000417688 PHF23Q9BUL5 403 aaPredicted RBP18.49■□□□□ 0.55
XPNPEP3-202ENST00000417688 KDM4FA0A1W2PPD8 638 aa18.43■□□□□ 0.54
XPNPEP3-202ENST00000417688 AQRO60306 1485 aaKnown RBP eCLIP18.4■□□□□ 0.54
XPNPEP3-202ENST00000417688 CLASP1Q7Z460 1538 aa18.36■□□□□ 0.53
XPNPEP3-202ENST00000417688 WIZO95785 1651 aa18.33■□□□□ 0.52
XPNPEP3-202ENST00000417688 TOPBP1Q92547 1522 aa18.31■□□□□ 0.52
XPNPEP3-202ENST00000417688 GAPVD1Q14C86 1478 aa18.29■□□□□ 0.52
XPNPEP3-202ENST00000417688 SYNJ1O43426 1573 aa18.23■□□□□ 0.51
XPNPEP3-202ENST00000417688 TARBP1Q13395 1621 aaKnown RBP18.22■□□□□ 0.51
XPNPEP3-202ENST00000417688 CHMP7Q8WUX9 453 aaPredicted RBP18.2■□□□□ 0.5
XPNPEP3-202ENST00000417688 PRDM2Q13029 1718 aa18.19■□□□□ 0.5
XPNPEP3-202ENST00000417688 KIF13AQ9H1H9 1805 aa18.19■□□□□ 0.5
XPNPEP3-202ENST00000417688 FBXO41Q8TF61 875 aa18.18■□□□□ 0.5
XPNPEP3-202ENST00000417688 ABCC8Q09428 1581 aa18.17■□□□□ 0.5
XPNPEP3-202ENST00000417688 ERCC6L2Q5T890 1561 aa18.15■□□□□ 0.5
XPNPEP3-202ENST00000417688 SNAPC4Q5SXM2 1469 aa18.14■□□□□ 0.5
XPNPEP3-202ENST00000417688 TDRD9Q8NDG6 1382 aaKnown RBP18.11■□□□□ 0.49
XPNPEP3-202ENST00000417688 DNMBPQ6XZF7 1577 aa18.11■□□□□ 0.49
XPNPEP3-202ENST00000417688 HECW2Q9P2P5 1572 aa18.08■□□□□ 0.49
XPNPEP3-202ENST00000417688 LMTK3Q96Q04 1460 aa18.07■□□□□ 0.48
XPNPEP3-202ENST00000417688 POLA1P09884 1462 aaPredicted RBP18.04■□□□□ 0.48
XPNPEP3-202ENST00000417688 RAD54L2Q9Y4B4 1467 aa18.03■□□□□ 0.48
XPNPEP3-202ENST00000417688 MAGI1Q96QZ7 1491 aaPredicted RBP18.02■□□□□ 0.48
XPNPEP3-202ENST00000417688 FAM69CQ0P6D2 419 aa18.02■□□□□ 0.48
XPNPEP3-202ENST00000417688 SYNJ2O15056 1496 aa18.01■□□□□ 0.47
XPNPEP3-202ENST00000417688 KDM6BO15054 1643 aa18■□□□□ 0.47
XPNPEP3-202ENST00000417688 TOP2AP11388 1531 aaKnown RBP17.98■□□□□ 0.47
XPNPEP3-202ENST00000417688 SOCS7O14512 581 aa17.97■□□□□ 0.47
XPNPEP3-202ENST00000417688 SOGA1O94964 1423 aa17.96■□□□□ 0.47
XPNPEP3-202ENST00000417688 ADGRL1O94910 1474 aa17.95■□□□□ 0.46
XPNPEP3-202ENST00000417688 ABCC10Q5T3U5 1492 aa17.94■□□□□ 0.46
XPNPEP3-202ENST00000417688 GRIN2BQ13224 1484 aa17.92■□□□□ 0.46
XPNPEP3-202ENST00000417688 WDR97A6NE52 1622 aa17.9■□□□□ 0.46
XPNPEP3-202ENST00000417688 ILDR2Q71H61 639 aa17.9■□□□□ 0.46
XPNPEP3-202ENST00000417688 CEP170Q5SW79 1584 aa17.85■□□□□ 0.45
XPNPEP3-202ENST00000417688 CCDC88BA6NC98 1476 aa17.83■□□□□ 0.45
XPNPEP3-202ENST00000417688 DIP2BQ9P265 1576 aa17.83■□□□□ 0.44
XPNPEP3-202ENST00000417688 TSPOAP1O95153 1857 aa17.8■□□□□ 0.44
XPNPEP3-202ENST00000417688 NPM1P06748 294 aaKnown RBP eCLIP17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms