RNA–Protein interactions for RNA: ENST00000417662.1

IFRD1-203, Transcript of interferon related developmental regulator 1, humanhuman

TSL 3

Gene IFRD1, Length 429 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFRD1-203ENST00000417662 NISCHQ9Y2I1 1504 aa40.77■■■■■ 4.12
IFRD1-203ENST00000417662 ABCC9O60706 1549 aa37.61■■■■□ 3.61
IFRD1-203ENST00000417662 CCDC180Q9P1Z9 1646 aa36.84■■■■□ 3.49
IFRD1-203ENST00000417662 DNAJC5BQ9UF47 199 aa35.9■■■■□ 3.34
IFRD1-203ENST00000417662 RB1CC1Q8TDY2 1594 aa35.4■■■■□ 3.26
IFRD1-203ENST00000417662 NACADO15069 1562 aa34.96■■■■□ 3.19
IFRD1-203ENST00000417662 PABPN1Q86U42 306 aaKnown RBP eCLIP34.95■■■■□ 3.19
IFRD1-203ENST00000417662 DCAF8L2P0C7V8 631 aa34.85■■■■□ 3.17
IFRD1-203ENST00000417662 UNC13AQ9UPW8 1703 aa34.75■■■■□ 3.15
IFRD1-203ENST00000417662 BICRAQ9NZM4 1560 aa34.47■■■■□ 3.11
IFRD1-203ENST00000417662 MYO15BQ96JP2 1530 aa34.15■■■■□ 3.06
IFRD1-203ENST00000417662 CC2D2AQ9P2K1 1620 aa33.92■■■■□ 3.02
IFRD1-203ENST00000417662 CECR2Q9BXF3 1484 aa33.88■■■■□ 3.01
IFRD1-203ENST00000417662 SHROOM4Q9ULL8 1493 aa33.71■■■□□ 2.99
IFRD1-203ENST00000417662 SCRIBQ14160 1630 aa33.67■■■□□ 2.98
IFRD1-203ENST00000417662 EIF4G1Q04637 1599 aaKnown RBP33.64■■■□□ 2.98
IFRD1-203ENST00000417662 ZCCHC6Q5VYS8 1495 aaKnown RBP33.63■■■□□ 2.97
IFRD1-203ENST00000417662 DCAF1Q9Y4B6 1507 aa33.52■■■□□ 2.96
IFRD1-203ENST00000417662 DNAJC5Q9H3Z4 198 aa33.33■■■□□ 2.93
IFRD1-203ENST00000417662 CUX2O14529 1486 aa32.55■■■□□ 2.8
IFRD1-203ENST00000417662 ERCC6Q03468 1493 aa32.48■■■□□ 2.79
IFRD1-203ENST00000417662 NCAPD3P42695 1498 aa32.28■■■□□ 2.76
IFRD1-203ENST00000417662 NESP48681 1621 aa32.15■■■□□ 2.74
IFRD1-203ENST00000417662 ATAD2BQ9ULI0 1458 aa32.14■■■□□ 2.74
IFRD1-203ENST00000417662 SMARCA4P51532 1647 aa31.98■■■□□ 2.71
IFRD1-203ENST00000417662 HMGXB3Q12766 1538 aa31.98■■■□□ 2.71
IFRD1-203ENST00000417662 SMARCA2P51531 1590 aa31.98■■■□□ 2.71
IFRD1-203ENST00000417662 THOC2Q8NI27 1593 aaKnown RBP31.9■■■□□ 2.7
IFRD1-203ENST00000417662 BAZ1BQ9UIG0 1483 aaKnown RBP31.8■■■□□ 2.68
IFRD1-203ENST00000417662 TRIM41Q8WV44 630 aa31.75■■■□□ 2.67
IFRD1-203ENST00000417662 KIF21AQ7Z4S6 1674 aa31.73■■■□□ 2.67
IFRD1-203ENST00000417662 LAMC3Q9Y6N6 1575 aa31.68■■■□□ 2.66
IFRD1-203ENST00000417662 BAZ1AQ9NRL2 1556 aaPredicted RBP31.65■■■□□ 2.66
IFRD1-203ENST00000417662 PEG3Q9GZU2 1588 aa31.57■■■□□ 2.64
IFRD1-203ENST00000417662 PDS5BQ9NTI5 1447 aa31.5■■■□□ 2.63
IFRD1-203ENST00000417662 MROH2BQ7Z745 1585 aa31.47■■■□□ 2.63
IFRD1-203ENST00000417662 MRC2Q9UBG0 1479 aa31.32■■■□□ 2.6
IFRD1-203ENST00000417662 CADPSQ9ULU8 1353 aa31.29■■■□□ 2.6
IFRD1-203ENST00000417662 WDR62O43379 1518 aa31.25■■■□□ 2.59
IFRD1-203ENST00000417662 WIZO95785 1651 aa31.12■■■□□ 2.57
IFRD1-203ENST00000417662 CEP164Q9UPV0 1460 aa31.07■■■□□ 2.56
IFRD1-203ENST00000417662 OSCARQ8IYS5 282 aa30.99■■■□□ 2.55
IFRD1-203ENST00000417662 FANCD2Q9BXW9 1451 aa30.98■■■□□ 2.55
IFRD1-203ENST00000417662 URB2Q14146 1524 aaKnown RBP30.8■■■□□ 2.52
IFRD1-203ENST00000417662 CFTRP13569 1480 aa30.79■■■□□ 2.52
IFRD1-203ENST00000417662 RIMBP3CA6NJZ7 1639 aa30.76■■■□□ 2.51
IFRD1-203ENST00000417662 RIMBP3BA6NNM3 1639 aa30.76■■■□□ 2.51
IFRD1-203ENST00000417662 RIMBP3Q9UFD9 1639 aa30.76■■■□□ 2.51
IFRD1-203ENST00000417662 TOP2AP11388 1531 aaKnown RBP30.57■■■□□ 2.48
IFRD1-203ENST00000417662 ZNF608Q9ULD9 1512 aaPredicted RBP30.57■■■□□ 2.48
IFRD1-203ENST00000417662 ARHGEF11O15085 1522 aa30.54■■■□□ 2.48
IFRD1-203ENST00000417662 RSF1Q96T23 1441 aaPredicted RBP30.53■■■□□ 2.48
IFRD1-203ENST00000417662 PRDM2Q13029 1718 aa30.51■■■□□ 2.47
IFRD1-203ENST00000417662 IFT140Q96RY7 1462 aa30.44■■■□□ 2.46
IFRD1-203ENST00000417662 CYB5RLQ6IPT4 315 aa30.4■■■□□ 2.46
IFRD1-203ENST00000417662 EIF4G3O43432 1585 aaKnown RBP30.34■■■□□ 2.45
IFRD1-203ENST00000417662 TOPBP1Q92547 1522 aa30.33■■■□□ 2.45
IFRD1-203ENST00000417662 CHD1O14646 1710 aa30.3■■■□□ 2.44
IFRD1-203ENST00000417662 TRHP20396 242 aaPredicted RBP30.29■■■□□ 2.44
IFRD1-203ENST00000417662 CCDC88BA6NC98 1476 aa30.26■■■□□ 2.44
IFRD1-203ENST00000417662 ARAP1Q96P48 1450 aa30.21■■■□□ 2.43
IFRD1-203ENST00000417662 AQRO60306 1485 aaKnown RBP eCLIP30.19■■■□□ 2.42
IFRD1-203ENST00000417662 FBLN2P98095 1184 aa30.16■■■□□ 2.42
IFRD1-203ENST00000417662 DNMBPQ6XZF7 1577 aa30.14■■■□□ 2.42
IFRD1-203ENST00000417662 TARBP1Q13395 1621 aaKnown RBP30.13■■■□□ 2.41
IFRD1-203ENST00000417662 ABCC8Q09428 1581 aa30.11■■■□□ 2.41
IFRD1-203ENST00000417662 POLA1P09884 1462 aaPredicted RBP29.98■■■□□ 2.39
IFRD1-203ENST00000417662 RAD54L2Q9Y4B4 1467 aa29.94■■■□□ 2.38
IFRD1-203ENST00000417662 TDRD9Q8NDG6 1382 aaKnown RBP29.9■■■□□ 2.38
IFRD1-203ENST00000417662 AEBP2Q6ZN18 517 aaPredicted RBP29.87■■■□□ 2.37
IFRD1-203ENST00000417662 SNAPC4Q5SXM2 1469 aa29.85■■■□□ 2.37
IFRD1-203ENST00000417662 CLASP1Q7Z460 1538 aa29.83■■■□□ 2.37
IFRD1-203ENST00000417662 SOGA1O94964 1423 aa29.82■■■□□ 2.36
IFRD1-203ENST00000417662 CHMP7Q8WUX9 453 aaPredicted RBP29.75■■■□□ 2.35
IFRD1-203ENST00000417662 SYNJ1O43426 1573 aa29.74■■■□□ 2.35
IFRD1-203ENST00000417662 FGD5Q6ZNL6 1462 aa29.71■■■□□ 2.35
IFRD1-203ENST00000417662 MAGI1Q96QZ7 1491 aaPredicted RBP29.65■■■□□ 2.34
IFRD1-203ENST00000417662 WDR97A6NE52 1622 aa29.63■■■□□ 2.33
IFRD1-203ENST00000417662 GRIN2BQ13224 1484 aa29.61■■■□□ 2.33
IFRD1-203ENST00000417662 CUX1P39880 1505 aa29.6■■■□□ 2.33
IFRD1-203ENST00000417662 SYNJ2O15056 1496 aa29.59■■■□□ 2.33
IFRD1-203ENST00000417662 GAPVD1Q14C86 1478 aa29.56■■■□□ 2.32
IFRD1-203ENST00000417662 PBRM1Q86U86 1689 aa29.56■■■□□ 2.32
IFRD1-203ENST00000417662 ERCC6L2Q5T890 1561 aa29.43■■■□□ 2.3
IFRD1-203ENST00000417662 ABCA5Q8WWZ7 1642 aa29.34■■■□□ 2.29
IFRD1-203ENST00000417662 ABCA10Q8WWZ4 1543 aa29.27■■■□□ 2.28
IFRD1-203ENST00000417662 GRIN2AQ12879 1464 aa29.25■■■□□ 2.27
IFRD1-203ENST00000417662 CEP170Q5SW79 1584 aa29.25■■■□□ 2.27
IFRD1-203ENST00000417662 KIF13AQ9H1H9 1805 aa29.2■■■□□ 2.26
IFRD1-203ENST00000417662 ADAMTS12P58397 1594 aa29.18■■■□□ 2.26
IFRD1-203ENST00000417662 NUP160Q12769 1436 aa29.14■■■□□ 2.26
IFRD1-203ENST00000417662 SHROOM2Q13796 1616 aa29.12■■■□□ 2.25
IFRD1-203ENST00000417662 WRNQ14191 1432 aaPredicted RBP eCLIP29.03■■■□□ 2.24
IFRD1-203ENST00000417662 FHAD1B1AJZ9 1412 aa29.01■■■□□ 2.23
IFRD1-203ENST00000417662 PRG4Q92954 1404 aaPredicted RBP28.97■■■□□ 2.23
IFRD1-203ENST00000417662 BIVM-ERCC5R4GMW8 1640 aa28.93■■■□□ 2.22
IFRD1-203ENST00000417662 FAM69CQ0P6D2 419 aa28.92■■■□□ 2.22
IFRD1-203ENST00000417662 TOP2BQ02880 1626 aa28.9■■■□□ 2.22
IFRD1-203ENST00000417662 ERICH3Q5RHP9 1530 aa28.89■■■□□ 2.21
IFRD1-203ENST00000417662 JPH4Q96JJ6 628 aa28.88■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms