RNA–Protein interactions for RNA: ENST00000417658.5

PRPF18-203, Transcript of pre-mRNA processing factor 18, humanhuman

TSL 5

Gene PRPF18, Length 1,062 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-203ENST00000417658 NISCHQ9Y2I1 1504 aa41.34■■■■■ 4.21
PRPF18-203ENST00000417658 ABCC9O60706 1549 aa37.47■■■■□ 3.59
PRPF18-203ENST00000417658 CCDC180Q9P1Z9 1646 aa37.19■■■■□ 3.54
PRPF18-203ENST00000417658 RB1CC1Q8TDY2 1594 aa35.57■■■■□ 3.28
PRPF18-203ENST00000417658 DNAJC5BQ9UF47 199 aa35.49■■■■□ 3.27
PRPF18-203ENST00000417658 NACADO15069 1562 aa35.29■■■■□ 3.24
PRPF18-203ENST00000417658 DCAF8L2P0C7V8 631 aa35.04■■■■□ 3.2
PRPF18-203ENST00000417658 PABPN1Q86U42 306 aaKnown RBP eCLIP34.88■■■■□ 3.17
PRPF18-203ENST00000417658 MYO15BQ96JP2 1530 aa34.76■■■■□ 3.15
PRPF18-203ENST00000417658 UNC13AQ9UPW8 1703 aa34.68■■■■□ 3.14
PRPF18-203ENST00000417658 BICRAQ9NZM4 1560 aa34.53■■■■□ 3.12
PRPF18-203ENST00000417658 ZCCHC6Q5VYS8 1495 aaKnown RBP34.17■■■■□ 3.06
PRPF18-203ENST00000417658 DCAF1Q9Y4B6 1507 aa34.17■■■■□ 3.06
PRPF18-203ENST00000417658 SHROOM4Q9ULL8 1493 aa34.11■■■■□ 3.05
PRPF18-203ENST00000417658 CC2D2AQ9P2K1 1620 aa33.84■■■■□ 3.01
PRPF18-203ENST00000417658 CECR2Q9BXF3 1484 aa33.82■■■■□ 3.01
PRPF18-203ENST00000417658 SCRIBQ14160 1630 aa33.81■■■■□ 3
PRPF18-203ENST00000417658 EIF4G1Q04637 1599 aaKnown RBP33.71■■■□□ 2.99
PRPF18-203ENST00000417658 DNAJC5Q9H3Z4 198 aa32.87■■■□□ 2.85
PRPF18-203ENST00000417658 NCAPD3P42695 1498 aa32.62■■■□□ 2.81
PRPF18-203ENST00000417658 CUX2O14529 1486 aa32.48■■■□□ 2.79
PRPF18-203ENST00000417658 ATAD2BQ9ULI0 1458 aa32.42■■■□□ 2.78
PRPF18-203ENST00000417658 ERCC6Q03468 1493 aa32.4■■■□□ 2.78
PRPF18-203ENST00000417658 SMARCA2P51531 1590 aa32.32■■■□□ 2.77
PRPF18-203ENST00000417658 HMGXB3Q12766 1538 aa32.29■■■□□ 2.76
PRPF18-203ENST00000417658 SMARCA4P51532 1647 aa32.27■■■□□ 2.76
PRPF18-203ENST00000417658 BAZ1AQ9NRL2 1556 aaPredicted RBP32.11■■■□□ 2.73
PRPF18-203ENST00000417658 NESP48681 1621 aa32.1■■■□□ 2.73
PRPF18-203ENST00000417658 BAZ1BQ9UIG0 1483 aaKnown RBP32.08■■■□□ 2.73
PRPF18-203ENST00000417658 PEG3Q9GZU2 1588 aa32.02■■■□□ 2.72
PRPF18-203ENST00000417658 LAMC3Q9Y6N6 1575 aa31.87■■■□□ 2.69
PRPF18-203ENST00000417658 MROH2BQ7Z745 1585 aa31.81■■■□□ 2.68
PRPF18-203ENST00000417658 THOC2Q8NI27 1593 aaKnown RBP31.81■■■□□ 2.68
PRPF18-203ENST00000417658 PDS5BQ9NTI5 1447 aa31.75■■■□□ 2.67
PRPF18-203ENST00000417658 KIF21AQ7Z4S6 1674 aa31.63■■■□□ 2.65
PRPF18-203ENST00000417658 CADPSQ9ULU8 1353 aa31.6■■■□□ 2.65
PRPF18-203ENST00000417658 MRC2Q9UBG0 1479 aa31.44■■■□□ 2.62
PRPF18-203ENST00000417658 WIZO95785 1651 aa31.39■■■□□ 2.62
PRPF18-203ENST00000417658 WDR62O43379 1518 aa31.36■■■□□ 2.61
PRPF18-203ENST00000417658 CEP164Q9UPV0 1460 aa31.25■■■□□ 2.59
PRPF18-203ENST00000417658 TRIM41Q8WV44 630 aa31.2■■■□□ 2.59
PRPF18-203ENST00000417658 FANCD2Q9BXW9 1451 aa31.2■■■□□ 2.58
PRPF18-203ENST00000417658 CFTRP13569 1480 aa31.16■■■□□ 2.58
PRPF18-203ENST00000417658 RSF1Q96T23 1441 aaPredicted RBP31.09■■■□□ 2.57
PRPF18-203ENST00000417658 OSCARQ8IYS5 282 aa31.02■■■□□ 2.56
PRPF18-203ENST00000417658 TOP2AP11388 1531 aaKnown RBP31.01■■■□□ 2.55
PRPF18-203ENST00000417658 URB2Q14146 1524 aaKnown RBP30.93■■■□□ 2.54
PRPF18-203ENST00000417658 PRDM2Q13029 1718 aa30.72■■■□□ 2.51
PRPF18-203ENST00000417658 CCDC88BA6NC98 1476 aa30.69■■■□□ 2.5
PRPF18-203ENST00000417658 IFT140Q96RY7 1462 aa30.66■■■□□ 2.5
PRPF18-203ENST00000417658 ZNF608Q9ULD9 1512 aaPredicted RBP30.6■■■□□ 2.49
PRPF18-203ENST00000417658 TOPBP1Q92547 1522 aa30.57■■■□□ 2.48
PRPF18-203ENST00000417658 ABCC8Q09428 1581 aa30.55■■■□□ 2.48
PRPF18-203ENST00000417658 RIMBP3CA6NJZ7 1639 aa30.51■■■□□ 2.47
PRPF18-203ENST00000417658 RIMBP3BA6NNM3 1639 aa30.51■■■□□ 2.47
PRPF18-203ENST00000417658 RIMBP3Q9UFD9 1639 aa30.51■■■□□ 2.47
PRPF18-203ENST00000417658 ARHGEF11O15085 1522 aa30.41■■■□□ 2.46
PRPF18-203ENST00000417658 DNMBPQ6XZF7 1577 aa30.41■■■□□ 2.46
PRPF18-203ENST00000417658 EIF4G3O43432 1585 aaKnown RBP30.37■■■□□ 2.45
PRPF18-203ENST00000417658 AQRO60306 1485 aaKnown RBP eCLIP30.31■■■□□ 2.44
PRPF18-203ENST00000417658 TARBP1Q13395 1621 aaKnown RBP30.3■■■□□ 2.44
PRPF18-203ENST00000417658 CYB5RLQ6IPT4 315 aa30.27■■■□□ 2.44
PRPF18-203ENST00000417658 POLA1P09884 1462 aaPredicted RBP30.23■■■□□ 2.43
PRPF18-203ENST00000417658 CHD1O14646 1710 aa30.19■■■□□ 2.42
PRPF18-203ENST00000417658 FBLN2P98095 1184 aa30.19■■■□□ 2.42
PRPF18-203ENST00000417658 SOGA1O94964 1423 aa30.13■■■□□ 2.41
PRPF18-203ENST00000417658 RAD54L2Q9Y4B4 1467 aa30.11■■■□□ 2.41
PRPF18-203ENST00000417658 TDRD9Q8NDG6 1382 aaKnown RBP30.09■■■□□ 2.41
PRPF18-203ENST00000417658 ARAP1Q96P48 1450 aa30.08■■■□□ 2.41
PRPF18-203ENST00000417658 WDR97A6NE52 1622 aa30.01■■■□□ 2.39
PRPF18-203ENST00000417658 TRHP20396 242 aaPredicted RBP30.01■■■□□ 2.39
PRPF18-203ENST00000417658 FGD5Q6ZNL6 1462 aa29.99■■■□□ 2.39
PRPF18-203ENST00000417658 SNAPC4Q5SXM2 1469 aa29.96■■■□□ 2.39
PRPF18-203ENST00000417658 CHMP7Q8WUX9 453 aaPredicted RBP29.96■■■□□ 2.39
PRPF18-203ENST00000417658 MAGI1Q96QZ7 1491 aaPredicted RBP29.93■■■□□ 2.38
PRPF18-203ENST00000417658 CUX1P39880 1505 aa29.91■■■□□ 2.38
PRPF18-203ENST00000417658 CLASP1Q7Z460 1538 aa29.9■■■□□ 2.38
PRPF18-203ENST00000417658 GRIN2BQ13224 1484 aa29.89■■■□□ 2.38
PRPF18-203ENST00000417658 SYNJ1O43426 1573 aa29.86■■■□□ 2.37
PRPF18-203ENST00000417658 SYNJ2O15056 1496 aa29.82■■■□□ 2.36
PRPF18-203ENST00000417658 GAPVD1Q14C86 1478 aa29.74■■■□□ 2.35
PRPF18-203ENST00000417658 ABCA10Q8WWZ4 1543 aa29.66■■■□□ 2.34
PRPF18-203ENST00000417658 PBRM1Q86U86 1689 aa29.65■■■□□ 2.34
PRPF18-203ENST00000417658 ABCA5Q8WWZ7 1642 aa29.6■■■□□ 2.33
PRPF18-203ENST00000417658 WRNQ14191 1432 aaPredicted RBP eCLIP29.52■■■□□ 2.32
PRPF18-203ENST00000417658 GRIN2AQ12879 1464 aa29.48■■■□□ 2.31
PRPF18-203ENST00000417658 SUPT5HO00267 1087 aaKnown RBP29.48■■■□□ 2.31
PRPF18-203ENST00000417658 NUP160Q12769 1436 aa29.42■■■□□ 2.3
PRPF18-203ENST00000417658 ADAMTS12P58397 1594 aa29.38■■■□□ 2.29
PRPF18-203ENST00000417658 AEBP2Q6ZN18 517 aaPredicted RBP29.37■■■□□ 2.29
PRPF18-203ENST00000417658 ERCC6L2Q5T890 1561 aa29.37■■■□□ 2.29
PRPF18-203ENST00000417658 FHAD1B1AJZ9 1412 aa29.37■■■□□ 2.29
PRPF18-203ENST00000417658 TOP2BQ02880 1626 aa29.36■■■□□ 2.29
PRPF18-203ENST00000417658 CEP170Q5SW79 1584 aa29.35■■■□□ 2.29
PRPF18-203ENST00000417658 BIVM-ERCC5R4GMW8 1640 aa29.34■■■□□ 2.29
PRPF18-203ENST00000417658 SHROOM2Q13796 1616 aa29.29■■■□□ 2.28
PRPF18-203ENST00000417658 ERICH3Q5RHP9 1530 aa29.29■■■□□ 2.28
PRPF18-203ENST00000417658 JPH4Q96JJ6 628 aa29.17■■■□□ 2.26
PRPF18-203ENST00000417658 PRG4Q92954 1404 aaPredicted RBP29.16■■■□□ 2.26
PRPF18-203ENST00000417658 KIF13AQ9H1H9 1805 aa29.01■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 140.8 ms