RNA–Protein interactions for RNA: ENST00000417588.5

CHEK2-211, Transcript of checkpoint kinase 2, humanhuman

TSL 2

Gene CHEK2, Length 1,551 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-211ENST00000417588 NISCHQ9Y2I1 1504 aa23.63■■□□□ 1.37
CHEK2-211ENST00000417588 CCDC180Q9P1Z9 1646 aa21.04■□□□□ 0.96
CHEK2-211ENST00000417588 ABCC9O60706 1549 aa20.59■□□□□ 0.89
CHEK2-211ENST00000417588 RB1CC1Q8TDY2 1594 aa19.79■□□□□ 0.76
CHEK2-211ENST00000417588 NACADO15069 1562 aa19.77■□□□□ 0.76
CHEK2-211ENST00000417588 ZCCHC6Q5VYS8 1495 aaKnown RBP19.69■□□□□ 0.74
CHEK2-211ENST00000417588 DCAF8L2P0C7V8 631 aa19.69■□□□□ 0.74
CHEK2-211ENST00000417588 MYO15BQ96JP2 1530 aa19.68■□□□□ 0.74
CHEK2-211ENST00000417588 DCAF1Q9Y4B6 1507 aa19.57■□□□□ 0.72
CHEK2-211ENST00000417588 UNC13AQ9UPW8 1703 aa19.39■□□□□ 0.69
CHEK2-211ENST00000417588 BICRAQ9NZM4 1560 aa19.24■□□□□ 0.67
CHEK2-211ENST00000417588 PABPN1Q86U42 306 aaKnown RBP eCLIP19.22■□□□□ 0.67
CHEK2-211ENST00000417588 SCRIBQ14160 1630 aa19.16■□□□□ 0.66
CHEK2-211ENST00000417588 SHROOM4Q9ULL8 1493 aa19.01■□□□□ 0.63
CHEK2-211ENST00000417588 DNAJC5BQ9UF47 199 aa18.96■□□□□ 0.63
CHEK2-211ENST00000417588 EIF4G1Q04637 1599 aaKnown RBP18.71■□□□□ 0.59
CHEK2-211ENST00000417588 CC2D2AQ9P2K1 1620 aa18.64■□□□□ 0.57
CHEK2-211ENST00000417588 CECR2Q9BXF3 1484 aa18.5■□□□□ 0.55
CHEK2-211ENST00000417588 SMARCA4P51532 1647 aa18.35■□□□□ 0.53
CHEK2-211ENST00000417588 BAZ1AQ9NRL2 1556 aaPredicted RBP18.31■□□□□ 0.52
CHEK2-211ENST00000417588 NCAPD3P42695 1498 aa18.26■□□□□ 0.51
CHEK2-211ENST00000417588 ATAD2BQ9ULI0 1458 aa18.26■□□□□ 0.51
CHEK2-211ENST00000417588 SMARCA2P51531 1590 aa18.22■□□□□ 0.51
CHEK2-211ENST00000417588 MROH2BQ7Z745 1585 aa18.22■□□□□ 0.51
CHEK2-211ENST00000417588 PEG3Q9GZU2 1588 aa18.19■□□□□ 0.5
CHEK2-211ENST00000417588 HMGXB3Q12766 1538 aa18.17■□□□□ 0.5
CHEK2-211ENST00000417588 BAZ1BQ9UIG0 1483 aaKnown RBP18.08■□□□□ 0.49
CHEK2-211ENST00000417588 WIZO95785 1651 aa18.02■□□□□ 0.47
CHEK2-211ENST00000417588 RSF1Q96T23 1441 aaPredicted RBP18■□□□□ 0.47
CHEK2-211ENST00000417588 NESP48681 1621 aa17.82■□□□□ 0.44
CHEK2-211ENST00000417588 TOP2AP11388 1531 aaKnown RBP17.81■□□□□ 0.44
CHEK2-211ENST00000417588 LAMC3Q9Y6N6 1575 aa17.77■□□□□ 0.44
CHEK2-211ENST00000417588 ERCC6Q03468 1493 aa17.71■□□□□ 0.43
CHEK2-211ENST00000417588 CADPSQ9ULU8 1353 aa17.71■□□□□ 0.43
CHEK2-211ENST00000417588 PDS5BQ9NTI5 1447 aa17.63■□□□□ 0.41
CHEK2-211ENST00000417588 KIF21AQ7Z4S6 1674 aa17.62■□□□□ 0.41
CHEK2-211ENST00000417588 CFTRP13569 1480 aa17.61■□□□□ 0.41
CHEK2-211ENST00000417588 CCDC88BA6NC98 1476 aa17.61■□□□□ 0.41
CHEK2-211ENST00000417588 CUX2O14529 1486 aa17.57■□□□□ 0.4
CHEK2-211ENST00000417588 THOC2Q8NI27 1593 aaKnown RBP17.57■□□□□ 0.4
CHEK2-211ENST00000417588 FANCD2Q9BXW9 1451 aa17.5■□□□□ 0.39
CHEK2-211ENST00000417588 PRDM2Q13029 1718 aa17.48■□□□□ 0.39
CHEK2-211ENST00000417588 CEP164Q9UPV0 1460 aa17.47■□□□□ 0.39
CHEK2-211ENST00000417588 SUPT5HO00267 1087 aaKnown RBP17.46■□□□□ 0.39
CHEK2-211ENST00000417588 MRC2Q9UBG0 1479 aa17.46■□□□□ 0.39
CHEK2-211ENST00000417588 WDR62O43379 1518 aa17.42■□□□□ 0.38
CHEK2-211ENST00000417588 URB2Q14146 1524 aaKnown RBP17.34■□□□□ 0.37
CHEK2-211ENST00000417588 TOPBP1Q92547 1522 aa17.22■□□□□ 0.35
CHEK2-211ENST00000417588 ABCC8Q09428 1581 aa17.21■□□□□ 0.35
CHEK2-211ENST00000417588 DNMBPQ6XZF7 1577 aa17.2■□□□□ 0.34
CHEK2-211ENST00000417588 IFT140Q96RY7 1462 aa17.11■□□□□ 0.33
CHEK2-211ENST00000417588 CUX1P39880 1505 aa17.09■□□□□ 0.33
CHEK2-211ENST00000417588 DNAJC5Q9H3Z4 198 aa17.09■□□□□ 0.33
CHEK2-211ENST00000417588 POLA1P09884 1462 aaPredicted RBP17.08■□□□□ 0.32
CHEK2-211ENST00000417588 TARBP1Q13395 1621 aaKnown RBP17.06■□□□□ 0.32
CHEK2-211ENST00000417588 ZNF608Q9ULD9 1512 aaPredicted RBP17.06■□□□□ 0.32
CHEK2-211ENST00000417588 FGD5Q6ZNL6 1462 aa17.03■□□□□ 0.32
CHEK2-211ENST00000417588 RAD54L2Q9Y4B4 1467 aa17■□□□□ 0.31
CHEK2-211ENST00000417588 SOGA1O94964 1423 aa16.99■□□□□ 0.31
CHEK2-211ENST00000417588 EIF4G3O43432 1585 aaKnown RBP16.98■□□□□ 0.31
CHEK2-211ENST00000417588 WRNQ14191 1432 aaPredicted RBP eCLIP16.95■□□□□ 0.3
CHEK2-211ENST00000417588 AQRO60306 1485 aaKnown RBP eCLIP16.95■□□□□ 0.31e-20■■■■■ 27.5
CHEK2-211ENST00000417588 BIVM-ERCC5R4GMW8 1640 aa16.94■□□□□ 0.3
CHEK2-211ENST00000417588 TOP2BQ02880 1626 aa16.93■□□□□ 0.3
CHEK2-211ENST00000417588 SYNJ1O43426 1573 aa16.93■□□□□ 0.3
CHEK2-211ENST00000417588 WDR97A6NE52 1622 aa16.91■□□□□ 0.3
CHEK2-211ENST00000417588 TDRD9Q8NDG6 1382 aaKnown RBP16.9■□□□□ 0.3
CHEK2-211ENST00000417588 ABCA10Q8WWZ4 1543 aa16.87■□□□□ 0.29
CHEK2-211ENST00000417588 OSCARQ8IYS5 282 aa16.82■□□□□ 0.28
CHEK2-211ENST00000417588 ABCA5Q8WWZ7 1642 aa16.81■□□□□ 0.28
CHEK2-211ENST00000417588 GAPVD1Q14C86 1478 aa16.8■□□□□ 0.28
CHEK2-211ENST00000417588 GRIN2BQ13224 1484 aa16.79■□□□□ 0.28
CHEK2-211ENST00000417588 CHD1O14646 1710 aa16.78■□□□□ 0.28
CHEK2-211ENST00000417588 SNAPC4Q5SXM2 1469 aa16.77■□□□□ 0.28
CHEK2-211ENST00000417588 PBRM1Q86U86 1689 aa16.77■□□□□ 0.28
CHEK2-211ENST00000417588 MAGI1Q96QZ7 1491 aaPredicted RBP16.77■□□□□ 0.27
CHEK2-211ENST00000417588 FBLN2P98095 1184 aa16.7■□□□□ 0.26
CHEK2-211ENST00000417588 SYNJ2O15056 1496 aa16.7■□□□□ 0.26
CHEK2-211ENST00000417588 ERICH3Q5RHP9 1530 aa16.66■□□□□ 0.26
CHEK2-211ENST00000417588 CHMP7Q8WUX9 453 aaPredicted RBP16.66■□□□□ 0.26
CHEK2-211ENST00000417588 ADAMTS12P58397 1594 aa16.64■□□□□ 0.25
CHEK2-211ENST00000417588 CLASP1Q7Z460 1538 aa16.6■□□□□ 0.25
CHEK2-211ENST00000417588 FHAD1B1AJZ9 1412 aa16.6■□□□□ 0.25
CHEK2-211ENST00000417588 GRIN2AQ12879 1464 aa16.6■□□□□ 0.25
CHEK2-211ENST00000417588 KIF27Q86VH2 1401 aa16.59■□□□□ 0.25
CHEK2-211ENST00000417588 RIMBP3CA6NJZ7 1639 aa16.58■□□□□ 0.24
CHEK2-211ENST00000417588 RIMBP3BA6NNM3 1639 aa16.58■□□□□ 0.24
CHEK2-211ENST00000417588 RIMBP3Q9UFD9 1639 aa16.58■□□□□ 0.24
CHEK2-211ENST00000417588 ARHGEF11O15085 1522 aa16.58■□□□□ 0.24
CHEK2-211ENST00000417588 IGF1RP08069 1367 aa16.55■□□□□ 0.24
CHEK2-211ENST00000417588 NUP160Q12769 1436 aa16.54■□□□□ 0.24
CHEK2-211ENST00000417588 CEP170Q5SW79 1584 aa16.52■□□□□ 0.24
CHEK2-211ENST00000417588 TRIM41Q8WV44 630 aa16.5■□□□□ 0.23
CHEK2-211ENST00000417588 CUL7Q14999 1698 aa16.5■□□□□ 0.23
CHEK2-211ENST00000417588 RUSC2Q8N2Y8 1516 aa16.46■□□□□ 0.23
CHEK2-211ENST00000417588 ARAP1Q96P48 1450 aa16.44■□□□□ 0.22
CHEK2-211ENST00000417588 CARMIL1Q5VZK9 1371 aa16.43■□□□□ 0.22
CHEK2-211ENST00000417588 SHROOM2Q13796 1616 aa16.43■□□□□ 0.22
CHEK2-211ENST00000417588 CYB5RLQ6IPT4 315 aa16.39■□□□□ 0.21
CHEK2-211ENST00000417588 ERCC6L2Q5T890 1561 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms