RNA–Protein interactions for RNA: ENST00000417493.1

SNRNP25-204, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 25, humanhuman

TSL 5

Gene SNRNP25, Length 408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP25-204ENST00000417493 NISCHQ9Y2I1 1504 aa26.64■■□□□ 1.85
SNRNP25-204ENST00000417493 CCDC180Q9P1Z9 1646 aa23.85■■□□□ 1.41
SNRNP25-204ENST00000417493 ABCC9O60706 1549 aa23.29■■□□□ 1.32
SNRNP25-204ENST00000417493 RB1CC1Q8TDY2 1594 aa22.5■■□□□ 1.19
SNRNP25-204ENST00000417493 NACADO15069 1562 aa22.43■■□□□ 1.18
SNRNP25-204ENST00000417493 DCAF8L2P0C7V8 631 aa22.3■■□□□ 1.16
SNRNP25-204ENST00000417493 MYO15BQ96JP2 1530 aa22.26■■□□□ 1.15
SNRNP25-204ENST00000417493 ZCCHC6Q5VYS8 1495 aaKnown RBP22.15■■□□□ 1.14
SNRNP25-204ENST00000417493 DCAF1Q9Y4B6 1507 aa22.1■■□□□ 1.13
SNRNP25-204ENST00000417493 UNC13AQ9UPW8 1703 aa21.93■■□□□ 1.1
SNRNP25-204ENST00000417493 PABPN1Q86U42 306 aaKnown RBP eCLIP21.7■■□□□ 1.06
SNRNP25-204ENST00000417493 BICRAQ9NZM4 1560 aa21.67■■□□□ 1.06
SNRNP25-204ENST00000417493 SCRIBQ14160 1630 aa21.64■■□□□ 1.05
SNRNP25-204ENST00000417493 SHROOM4Q9ULL8 1493 aa21.63■■□□□ 1.05
SNRNP25-204ENST00000417493 DNAJC5BQ9UF47 199 aa21.35■■□□□ 1.01
SNRNP25-204ENST00000417493 EIF4G1Q04637 1599 aaKnown RBP21.17■□□□□ 0.98
SNRNP25-204ENST00000417493 CC2D2AQ9P2K1 1620 aa21.11■□□□□ 0.97
SNRNP25-204ENST00000417493 CECR2Q9BXF3 1484 aa20.99■□□□□ 0.95
SNRNP25-204ENST00000417493 BAZ1AQ9NRL2 1556 aaPredicted RBP20.72■□□□□ 0.91
SNRNP25-204ENST00000417493 SMARCA4P51532 1647 aa20.71■□□□□ 0.91
SNRNP25-204ENST00000417493 SMARCA2P51531 1590 aa20.67■□□□□ 0.9
SNRNP25-204ENST00000417493 NCAPD3P42695 1498 aa20.63■□□□□ 0.89
SNRNP25-204ENST00000417493 ATAD2BQ9ULI0 1458 aa20.59■□□□□ 0.89
SNRNP25-204ENST00000417493 HMGXB3Q12766 1538 aa20.56■□□□□ 0.88
SNRNP25-204ENST00000417493 PEG3Q9GZU2 1588 aa20.53■□□□□ 0.88
SNRNP25-204ENST00000417493 BAZ1BQ9UIG0 1483 aaKnown RBP20.48■□□□□ 0.87
SNRNP25-204ENST00000417493 MROH2BQ7Z745 1585 aa20.46■□□□□ 0.87
SNRNP25-204ENST00000417493 WIZO95785 1651 aa20.28■□□□□ 0.84
SNRNP25-204ENST00000417493 RSF1Q96T23 1441 aaPredicted RBP20.2■□□□□ 0.82
SNRNP25-204ENST00000417493 ERCC6Q03468 1493 aa20.19■□□□□ 0.82
SNRNP25-204ENST00000417493 LAMC3Q9Y6N6 1575 aa20.17■□□□□ 0.82
SNRNP25-204ENST00000417493 TOP2AP11388 1531 aaKnown RBP20.11■□□□□ 0.81
SNRNP25-204ENST00000417493 NESP48681 1621 aa20.08■□□□□ 0.8
SNRNP25-204ENST00000417493 PDS5BQ9NTI5 1447 aa20.04■□□□□ 0.8
SNRNP25-204ENST00000417493 CUX2O14529 1486 aa20.03■□□□□ 0.8
SNRNP25-204ENST00000417493 CADPSQ9ULU8 1353 aa20.02■□□□□ 0.8
SNRNP25-204ENST00000417493 KIF21AQ7Z4S6 1674 aa19.94■□□□□ 0.78
SNRNP25-204ENST00000417493 THOC2Q8NI27 1593 aaKnown RBP19.87■□□□□ 0.77
SNRNP25-204ENST00000417493 CFTRP13569 1480 aa19.87■□□□□ 0.77
SNRNP25-204ENST00000417493 PRDM2Q13029 1718 aa19.85■□□□□ 0.77
SNRNP25-204ENST00000417493 CEP164Q9UPV0 1460 aa19.82■□□□□ 0.76
SNRNP25-204ENST00000417493 CCDC88BA6NC98 1476 aa19.8■□□□□ 0.76
SNRNP25-204ENST00000417493 FANCD2Q9BXW9 1451 aa19.79■□□□□ 0.76
SNRNP25-204ENST00000417493 MRC2Q9UBG0 1479 aa19.79■□□□□ 0.76
SNRNP25-204ENST00000417493 WDR62O43379 1518 aa19.72■□□□□ 0.75
SNRNP25-204ENST00000417493 SUPT5HO00267 1087 aaKnown RBP19.61■□□□□ 0.73
SNRNP25-204ENST00000417493 ABCC8Q09428 1581 aa19.58■□□□□ 0.73
SNRNP25-204ENST00000417493 URB2Q14146 1524 aaKnown RBP19.55■□□□□ 0.72
SNRNP25-204ENST00000417493 DNAJC5Q9H3Z4 198 aa19.48■□□□□ 0.71
SNRNP25-204ENST00000417493 DNMBPQ6XZF7 1577 aa19.47■□□□□ 0.71
SNRNP25-204ENST00000417493 TOPBP1Q92547 1522 aa19.46■□□□□ 0.71
SNRNP25-204ENST00000417493 IFT140Q96RY7 1462 aa19.41■□□□□ 0.7
SNRNP25-204ENST00000417493 POLA1P09884 1462 aaPredicted RBP19.27■□□□□ 0.67
SNRNP25-204ENST00000417493 TARBP1Q13395 1621 aaKnown RBP19.25■□□□□ 0.67
SNRNP25-204ENST00000417493 WDR97A6NE52 1622 aa19.23■□□□□ 0.67
SNRNP25-204ENST00000417493 EIF4G3O43432 1585 aaKnown RBP19.23■□□□□ 0.67
SNRNP25-204ENST00000417493 CUX1P39880 1505 aa19.22■□□□□ 0.67
SNRNP25-204ENST00000417493 SOGA1O94964 1423 aa19.22■□□□□ 0.67
SNRNP25-204ENST00000417493 ZNF608Q9ULD9 1512 aaPredicted RBP19.21■□□□□ 0.67
SNRNP25-204ENST00000417493 FGD5Q6ZNL6 1462 aa19.21■□□□□ 0.67
SNRNP25-204ENST00000417493 OSCARQ8IYS5 282 aa19.16■□□□□ 0.66
SNRNP25-204ENST00000417493 RAD54L2Q9Y4B4 1467 aa19.14■□□□□ 0.65
SNRNP25-204ENST00000417493 BIVM-ERCC5R4GMW8 1640 aa19.11■□□□□ 0.65
SNRNP25-204ENST00000417493 AQRO60306 1485 aaKnown RBP eCLIP19.11■□□□□ 0.651e-7■■■■■ 49.5
SNRNP25-204ENST00000417493 WRNQ14191 1432 aaPredicted RBP eCLIP19.11■□□□□ 0.65
SNRNP25-204ENST00000417493 TOP2BQ02880 1626 aa19.1■□□□□ 0.65
SNRNP25-204ENST00000417493 TDRD9Q8NDG6 1382 aaKnown RBP19.06■□□□□ 0.64
SNRNP25-204ENST00000417493 ABCA10Q8WWZ4 1543 aa19.05■□□□□ 0.64
SNRNP25-204ENST00000417493 GRIN2BQ13224 1484 aa19.03■□□□□ 0.64
SNRNP25-204ENST00000417493 CHD1O14646 1710 aa19.03■□□□□ 0.64
SNRNP25-204ENST00000417493 MAGI1Q96QZ7 1491 aaPredicted RBP19.03■□□□□ 0.64
SNRNP25-204ENST00000417493 SYNJ1O43426 1573 aa19.02■□□□□ 0.63
SNRNP25-204ENST00000417493 PBRM1Q86U86 1689 aa19.01■□□□□ 0.63
SNRNP25-204ENST00000417493 GAPVD1Q14C86 1478 aa19■□□□□ 0.63
SNRNP25-204ENST00000417493 FBLN2P98095 1184 aa18.98■□□□□ 0.63
SNRNP25-204ENST00000417493 SNAPC4Q5SXM2 1469 aa18.97■□□□□ 0.63
SNRNP25-204ENST00000417493 ABCA5Q8WWZ7 1642 aa18.97■□□□□ 0.63
SNRNP25-204ENST00000417493 CHMP7Q8WUX9 453 aaPredicted RBP18.94■□□□□ 0.62
SNRNP25-204ENST00000417493 SYNJ2O15056 1496 aa18.92■□□□□ 0.62
SNRNP25-204ENST00000417493 ERICH3Q5RHP9 1530 aa18.85■□□□□ 0.61
SNRNP25-204ENST00000417493 RIMBP3CA6NJZ7 1639 aa18.83■□□□□ 0.61
SNRNP25-204ENST00000417493 RIMBP3BA6NNM3 1639 aa18.83■□□□□ 0.61
SNRNP25-204ENST00000417493 RIMBP3Q9UFD9 1639 aa18.83■□□□□ 0.61
SNRNP25-204ENST00000417493 ADAMTS12P58397 1594 aa18.81■□□□□ 0.6
SNRNP25-204ENST00000417493 ARHGEF11O15085 1522 aa18.8■□□□□ 0.6
SNRNP25-204ENST00000417493 FHAD1B1AJZ9 1412 aa18.8■□□□□ 0.6
SNRNP25-204ENST00000417493 TRIM41Q8WV44 630 aa18.78■□□□□ 0.6
SNRNP25-204ENST00000417493 KIF27Q86VH2 1401 aa18.77■□□□□ 0.6
SNRNP25-204ENST00000417493 CLASP1Q7Z460 1538 aa18.77■□□□□ 0.6
SNRNP25-204ENST00000417493 GRIN2AQ12879 1464 aa18.77■□□□□ 0.59
SNRNP25-204ENST00000417493 CUL7Q14999 1698 aa18.7■□□□□ 0.58
SNRNP25-204ENST00000417493 NUP160Q12769 1436 aa18.66■□□□□ 0.58
SNRNP25-204ENST00000417493 CEP170Q5SW79 1584 aa18.64■□□□□ 0.57
SNRNP25-204ENST00000417493 CYB5RLQ6IPT4 315 aa18.63■□□□□ 0.57
SNRNP25-204ENST00000417493 ARAP1Q96P48 1450 aa18.61■□□□□ 0.57
SNRNP25-204ENST00000417493 IGF1RP08069 1367 aa18.61■□□□□ 0.57
SNRNP25-204ENST00000417493 SHROOM2Q13796 1616 aa18.56■□□□□ 0.56
SNRNP25-204ENST00000417493 CARMIL1Q5VZK9 1371 aa18.55■□□□□ 0.56
SNRNP25-204ENST00000417493 RUSC2Q8N2Y8 1516 aa18.53■□□□□ 0.56
SNRNP25-204ENST00000417493 KIAA0586Q9BVV6 1533 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 143 ms