RNA–Protein interactions for RNA: ENST00000417364.1

SGO1-204, Transcript of shugoshin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SGO1, Length 1,075 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGO1-204ENST00000417364 NISCHQ9Y2I1 1504 aa26.24■■□□□ 1.79
SGO1-204ENST00000417364 CCDC180Q9P1Z9 1646 aa22.9■■□□□ 1.26
SGO1-204ENST00000417364 AEBP2Q6ZN18 517 aaPredicted RBP22.47■■□□□ 1.19
SGO1-204ENST00000417364 ZCCHC6Q5VYS8 1495 aaKnown RBP22.04■■□□□ 1.12
SGO1-204ENST00000417364 DCAF1Q9Y4B6 1507 aa21.8■■□□□ 1.08
SGO1-204ENST00000417364 DCAF8L2P0C7V8 631 aa21.58■■□□□ 1.05
SGO1-204ENST00000417364 MYO15BQ96JP2 1530 aa21.57■■□□□ 1.04
SGO1-204ENST00000417364 ABCC9O60706 1549 aa21.46■■□□□ 1.03
SGO1-204ENST00000417364 CHIC1Q5VXU3 224 aa21.43■■□□□ 1.02
SGO1-204ENST00000417364 NACADO15069 1562 aa21.35■■□□□ 1.01
SGO1-204ENST00000417364 SHROOM4Q9ULL8 1493 aa21.26■□□□□ 0.99
SGO1-204ENST00000417364 RB1CC1Q8TDY2 1594 aa21.12■□□□□ 0.97
SGO1-204ENST00000417364 SCRIBQ14160 1630 aa20.91■□□□□ 0.94
SGO1-204ENST00000417364 SUPT5HO00267 1087 aaKnown RBP20.58■□□□□ 0.89
SGO1-204ENST00000417364 UNC13AQ9UPW8 1703 aa20.55■□□□□ 0.88
SGO1-204ENST00000417364 BICRAQ9NZM4 1560 aa20.38■□□□□ 0.85
SGO1-204ENST00000417364 RSF1Q96T23 1441 aaPredicted RBP20.36■□□□□ 0.85
SGO1-204ENST00000417364 CECR2Q9BXF3 1484 aa20.29■□□□□ 0.84
SGO1-204ENST00000417364 BAZ1AQ9NRL2 1556 aaPredicted RBP20.29■□□□□ 0.84
SGO1-204ENST00000417364 PABPN1Q86U42 306 aaKnown RBP eCLIP20.25■□□□□ 0.83
SGO1-204ENST00000417364 MROH2BQ7Z745 1585 aa20.21■□□□□ 0.83
SGO1-204ENST00000417364 SMARCA4P51532 1647 aa20.13■□□□□ 0.81
SGO1-204ENST00000417364 WIZO95785 1651 aa20.01■□□□□ 0.79
SGO1-204ENST00000417364 PEG3Q9GZU2 1588 aa19.95■□□□□ 0.78
SGO1-204ENST00000417364 TOP2AP11388 1531 aaKnown RBP19.9■□□□□ 0.78
SGO1-204ENST00000417364 SMARCA2P51531 1590 aa19.87■□□□□ 0.77
SGO1-204ENST00000417364 ATAD2BQ9ULI0 1458 aa19.81■□□□□ 0.76
SGO1-204ENST00000417364 EIF4G1Q04637 1599 aaKnown RBP19.78■□□□□ 0.76
SGO1-204ENST00000417364 BAZ1BQ9UIG0 1483 aaKnown RBP19.71■□□□□ 0.75
SGO1-204ENST00000417364 NCAPD3P42695 1498 aa19.7■□□□□ 0.74
SGO1-204ENST00000417364 CCDC88BA6NC98 1476 aa19.67■□□□□ 0.74
SGO1-204ENST00000417364 HMGXB3Q12766 1538 aa19.65■□□□□ 0.74
SGO1-204ENST00000417364 CC2D2AQ9P2K1 1620 aa19.46■□□□□ 0.71
SGO1-204ENST00000417364 TRIM41Q8WV44 630 aa19.44■□□□□ 0.7
SGO1-204ENST00000417364 CFTRP13569 1480 aa19.24■□□□□ 0.67
SGO1-204ENST00000417364 WRNQ14191 1432 aaPredicted RBP eCLIP19.18■□□□□ 0.66
SGO1-204ENST00000417364 ABCC8Q09428 1581 aa19.18■□□□□ 0.66
SGO1-204ENST00000417364 CADPSQ9ULU8 1353 aa19.18■□□□□ 0.66
SGO1-204ENST00000417364 PRDM2Q13029 1718 aa19.11■□□□□ 0.65
SGO1-204ENST00000417364 EEA1Q15075 1411 aa19.06■□□□□ 0.64
SGO1-204ENST00000417364 TOP2BQ02880 1626 aa19.01■□□□□ 0.63
SGO1-204ENST00000417364 SYNJ1O43426 1573 aa19■□□□□ 0.63
SGO1-204ENST00000417364 LAMC3Q9Y6N6 1575 aa19■□□□□ 0.63
SGO1-204ENST00000417364 SENP3Q9H4L4 574 aaPredicted RBP18.99■□□□□ 0.63
SGO1-204ENST00000417364 BIVM-ERCC5R4GMW8 1640 aa18.99■□□□□ 0.63
SGO1-204ENST00000417364 LOC105371045A0A1W2PR82 267 aa18.95■□□□□ 0.62
SGO1-204ENST00000417364 FAM9AQ8IZU1 332 aaPredicted RBP18.94■□□□□ 0.62
SGO1-204ENST00000417364 FANCD2Q9BXW9 1451 aa18.91■□□□□ 0.62
SGO1-204ENST00000417364 CUX1P39880 1505 aa18.9■□□□□ 0.62
SGO1-204ENST00000417364 PHF23Q9BUL5 403 aaPredicted RBP18.89■□□□□ 0.61
SGO1-204ENST00000417364 PDS5BQ9NTI5 1447 aa18.89■□□□□ 0.61
SGO1-204ENST00000417364 CSRNP3Q8WYN3 585 aa18.88■□□□□ 0.61
SGO1-204ENST00000417364 SOGA1O94964 1423 aa18.88■□□□□ 0.61
SGO1-204ENST00000417364 DNAJC5BQ9UF47 199 aa18.84■□□□□ 0.61
SGO1-204ENST00000417364 NESP48681 1621 aa18.83■□□□□ 0.61
SGO1-204ENST00000417364 CEP164Q9UPV0 1460 aa18.8■□□□□ 0.6
SGO1-204ENST00000417364 DNMBPQ6XZF7 1577 aa18.77■□□□□ 0.6
SGO1-204ENST00000417364 RUSC2Q8N2Y8 1516 aa18.76■□□□□ 0.59
SGO1-204ENST00000417364 KIF27Q86VH2 1401 aa18.74■□□□□ 0.59
SGO1-204ENST00000417364 TOPBP1Q92547 1522 aa18.71■□□□□ 0.59
SGO1-204ENST00000417364 KIF21BO75037 1637 aa18.7■□□□□ 0.58
SGO1-204ENST00000417364 GOLGA3Q08378 1498 aa18.7■□□□□ 0.58
SGO1-204ENST00000417364 FGD5Q6ZNL6 1462 aa18.7■□□□□ 0.58
SGO1-204ENST00000417364 TNIKQ9UKE5 1360 aa18.69■□□□□ 0.58
SGO1-204ENST00000417364 URB2Q14146 1524 aaKnown RBP18.63■□□□□ 0.57
SGO1-204ENST00000417364 KIF21AQ7Z4S6 1674 aa18.62■□□□□ 0.57
SGO1-204ENST00000417364 POLA1P09884 1462 aaPredicted RBP18.61■□□□□ 0.57
SGO1-204ENST00000417364 ABCA10Q8WWZ4 1543 aa18.6■□□□□ 0.57
SGO1-204ENST00000417364 CUX2O14529 1486 aa18.6■□□□□ 0.57
SGO1-204ENST00000417364 UBTFP17480 764 aaKnown RBP18.6■□□□□ 0.57
SGO1-204ENST00000417364 ERICH3Q5RHP9 1530 aa18.59■□□□□ 0.57
SGO1-204ENST00000417364 PRXQ9BXM0 1461 aa18.59■□□□□ 0.57
SGO1-204ENST00000417364 MRC2Q9UBG0 1479 aa18.58■□□□□ 0.56
SGO1-204ENST00000417364 EHMT2Q96KQ7 1210 aa18.57■□□□□ 0.56
SGO1-204ENST00000417364 IGF1RP08069 1367 aa18.54■□□□□ 0.56
SGO1-204ENST00000417364 RAPGEF2Q9Y4G8 1499 aa18.51■□□□□ 0.55
SGO1-204ENST00000417364 CEP162Q5TB80 1403 aa18.5■□□□□ 0.55
SGO1-204ENST00000417364 RAD54L2Q9Y4B4 1467 aa18.5■□□□□ 0.55
SGO1-204ENST00000417364 ERCC6Q03468 1493 aa18.47■□□□□ 0.55
SGO1-204ENST00000417364 CARMIL1Q5VZK9 1371 aa18.46■□□□□ 0.55
SGO1-204ENST00000417364 WDR62O43379 1518 aa18.46■□□□□ 0.55
SGO1-204ENST00000417364 WDR97A6NE52 1622 aa18.45■□□□□ 0.54
SGO1-204ENST00000417364 TARBP1Q13395 1621 aaKnown RBP18.41■□□□□ 0.54
SGO1-204ENST00000417364 IFT140Q96RY7 1462 aa18.4■□□□□ 0.54
SGO1-204ENST00000417364 CUL7Q14999 1698 aa18.4■□□□□ 0.54
SGO1-204ENST00000417364 GAPVD1Q14C86 1478 aa18.39■□□□□ 0.54
SGO1-204ENST00000417364 ABCA5Q8WWZ7 1642 aa18.38■□□□□ 0.53
SGO1-204ENST00000417364 CLIP1P30622 1438 aa18.38■□□□□ 0.53
SGO1-204ENST00000417364 TDRD9Q8NDG6 1382 aaKnown RBP18.34■□□□□ 0.53
SGO1-204ENST00000417364 THOC2Q8NI27 1593 aaKnown RBP18.34■□□□□ 0.53
SGO1-204ENST00000417364 TRIM26Q12899 539 aaPredicted RBP18.29■□□□□ 0.52
SGO1-204ENST00000417364 GRIN2BQ13224 1484 aa18.26■□□□□ 0.51
SGO1-204ENST00000417364 VPS8Q8N3P4 1428 aa18.24■□□□□ 0.51
SGO1-204ENST00000417364 FHAD1B1AJZ9 1412 aa18.23■□□□□ 0.51
SGO1-204ENST00000417364 AQRO60306 1485 aaKnown RBP eCLIP18.21■□□□□ 0.511e-6■■□□□ 13.2
SGO1-204ENST00000417364 PBRM1Q86U86 1689 aa18.21■□□□□ 0.51
SGO1-204ENST00000417364 PCGF6Q9BYE7 350 aa18.17■□□□□ 0.5
SGO1-204ENST00000417364 ZNF608Q9ULD9 1512 aaPredicted RBP18.15■□□□□ 0.5
SGO1-204ENST00000417364 APLP2Q06481 763 aa18.15■□□□□ 0.5
SGO1-204ENST00000417364 ARHGAP35Q9NRY4 1499 aa18.14■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms