RNA–Protein interactions for RNA: ENST00000417180.1

MCFD2-210, Transcript of multiple coagulation factor deficiency 2, humanhuman

TSL 4

Gene MCFD2, Length 565 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCFD2-210ENST00000417180 NISCHQ9Y2I1 1504 aa32.02■■■□□ 2.72
MCFD2-210ENST00000417180 CCDC180Q9P1Z9 1646 aa28.5■■■□□ 2.15
MCFD2-210ENST00000417180 ABCC9O60706 1549 aa28.23■■■□□ 2.11
MCFD2-210ENST00000417180 RB1CC1Q8TDY2 1594 aa27.02■■□□□ 1.92
MCFD2-210ENST00000417180 DCAF8L2P0C7V8 631 aa26.99■■□□□ 1.91
MCFD2-210ENST00000417180 NACADO15069 1562 aa26.95■■□□□ 1.9
MCFD2-210ENST00000417180 MYO15BQ96JP2 1530 aa26.72■■□□□ 1.87
MCFD2-210ENST00000417180 ZCCHC6Q5VYS8 1495 aaKnown RBP26.58■■□□□ 1.85
MCFD2-210ENST00000417180 DCAF1Q9Y4B6 1507 aa26.49■■□□□ 1.83
MCFD2-210ENST00000417180 PABPN1Q86U42 306 aaKnown RBP eCLIP26.41■■□□□ 1.82
MCFD2-210ENST00000417180 UNC13AQ9UPW8 1703 aa26.25■■□□□ 1.79
MCFD2-210ENST00000417180 DNAJC5BQ9UF47 199 aa26.25■■□□□ 1.79
MCFD2-210ENST00000417180 BICRAQ9NZM4 1560 aa26.18■■□□□ 1.78
MCFD2-210ENST00000417180 SCRIBQ14160 1630 aa25.99■■□□□ 1.75
MCFD2-210ENST00000417180 SHROOM4Q9ULL8 1493 aa25.94■■□□□ 1.74
MCFD2-210ENST00000417180 EIF4G1Q04637 1599 aaKnown RBP25.52■■□□□ 1.68
MCFD2-210ENST00000417180 CC2D2AQ9P2K1 1620 aa25.48■■□□□ 1.67
MCFD2-210ENST00000417180 CECR2Q9BXF3 1484 aa25.42■■□□□ 1.66
MCFD2-210ENST00000417180 NCAPD3P42695 1498 aa24.92■■□□□ 1.58
MCFD2-210ENST00000417180 ATAD2BQ9ULI0 1458 aa24.86■■□□□ 1.57
MCFD2-210ENST00000417180 SMARCA4P51532 1647 aa24.84■■□□□ 1.57
MCFD2-210ENST00000417180 BAZ1AQ9NRL2 1556 aaPredicted RBP24.82■■□□□ 1.56
MCFD2-210ENST00000417180 SMARCA2P51531 1590 aa24.79■■□□□ 1.56
MCFD2-210ENST00000417180 HMGXB3Q12766 1538 aa24.69■■□□□ 1.54
MCFD2-210ENST00000417180 MROH2BQ7Z745 1585 aa24.65■■□□□ 1.54
MCFD2-210ENST00000417180 PEG3Q9GZU2 1588 aa24.63■■□□□ 1.53
MCFD2-210ENST00000417180 BAZ1BQ9UIG0 1483 aaKnown RBP24.62■■□□□ 1.53
MCFD2-210ENST00000417180 ERCC6Q03468 1493 aa24.38■■□□□ 1.49
MCFD2-210ENST00000417180 NESP48681 1621 aa24.33■■□□□ 1.49
MCFD2-210ENST00000417180 WIZO95785 1651 aa24.32■■□□□ 1.48
MCFD2-210ENST00000417180 RSF1Q96T23 1441 aaPredicted RBP24.32■■□□□ 1.48
MCFD2-210ENST00000417180 LAMC3Q9Y6N6 1575 aa24.24■■□□□ 1.47
MCFD2-210ENST00000417180 CUX2O14529 1486 aa24.23■■□□□ 1.47
MCFD2-210ENST00000417180 CADPSQ9ULU8 1353 aa24.19■■□□□ 1.46
MCFD2-210ENST00000417180 PDS5BQ9NTI5 1447 aa24.17■■□□□ 1.46
MCFD2-210ENST00000417180 TOP2AP11388 1531 aaKnown RBP24.08■■□□□ 1.45
MCFD2-210ENST00000417180 THOC2Q8NI27 1593 aaKnown RBP23.96■■□□□ 1.43
MCFD2-210ENST00000417180 CFTRP13569 1480 aa23.95■■□□□ 1.42
MCFD2-210ENST00000417180 KIF21AQ7Z4S6 1674 aa23.94■■□□□ 1.42
MCFD2-210ENST00000417180 DNAJC5Q9H3Z4 198 aa23.91■■□□□ 1.42
MCFD2-210ENST00000417180 MRC2Q9UBG0 1479 aa23.87■■□□□ 1.41
MCFD2-210ENST00000417180 FANCD2Q9BXW9 1451 aa23.87■■□□□ 1.41
MCFD2-210ENST00000417180 CCDC88BA6NC98 1476 aa23.86■■□□□ 1.41
MCFD2-210ENST00000417180 CEP164Q9UPV0 1460 aa23.84■■□□□ 1.41
MCFD2-210ENST00000417180 WDR62O43379 1518 aa23.77■■□□□ 1.4
MCFD2-210ENST00000417180 URB2Q14146 1524 aaKnown RBP23.62■■□□□ 1.37
MCFD2-210ENST00000417180 PRDM2Q13029 1718 aa23.56■■□□□ 1.36
MCFD2-210ENST00000417180 SUPT5HO00267 1087 aaKnown RBP23.55■■□□□ 1.36
MCFD2-210ENST00000417180 ABCC8Q09428 1581 aa23.48■■□□□ 1.35
MCFD2-210ENST00000417180 TOPBP1Q92547 1522 aa23.43■■□□□ 1.34
MCFD2-210ENST00000417180 IFT140Q96RY7 1462 aa23.38■■□□□ 1.33
MCFD2-210ENST00000417180 DNMBPQ6XZF7 1577 aa23.35■■□□□ 1.33
MCFD2-210ENST00000417180 OSCARQ8IYS5 282 aa23.28■■□□□ 1.32
MCFD2-210ENST00000417180 ZNF608Q9ULD9 1512 aaPredicted RBP23.27■■□□□ 1.32
MCFD2-210ENST00000417180 POLA1P09884 1462 aaPredicted RBP23.22■■□□□ 1.31
MCFD2-210ENST00000417180 SOGA1O94964 1423 aa23.19■■□□□ 1.3
MCFD2-210ENST00000417180 TARBP1Q13395 1621 aaKnown RBP23.15■■□□□ 1.3
MCFD2-210ENST00000417180 AQRO60306 1485 aaKnown RBP eCLIP23.15■■□□□ 1.32e-6■■■□□ 18.3
MCFD2-210ENST00000417180 CUX1P39880 1505 aa23.13■■□□□ 1.29
MCFD2-210ENST00000417180 RAD54L2Q9Y4B4 1467 aa23.13■■□□□ 1.29
MCFD2-210ENST00000417180 FGD5Q6ZNL6 1462 aa23.11■■□□□ 1.29
MCFD2-210ENST00000417180 EIF4G3O43432 1585 aaKnown RBP23.09■■□□□ 1.29
MCFD2-210ENST00000417180 TDRD9Q8NDG6 1382 aaKnown RBP23.08■■□□□ 1.29
MCFD2-210ENST00000417180 FBLN2P98095 1184 aa22.98■■□□□ 1.27
MCFD2-210ENST00000417180 WDR97A6NE52 1622 aa22.97■■□□□ 1.27
MCFD2-210ENST00000417180 TRIM41Q8WV44 630 aa22.96■■□□□ 1.27
MCFD2-210ENST00000417180 WRNQ14191 1432 aaPredicted RBP eCLIP22.93■■□□□ 1.26
MCFD2-210ENST00000417180 GRIN2BQ13224 1484 aa22.92■■□□□ 1.26
MCFD2-210ENST00000417180 ABCA10Q8WWZ4 1543 aa22.9■■□□□ 1.26
MCFD2-210ENST00000417180 CHMP7Q8WUX9 453 aaPredicted RBP22.89■■□□□ 1.25
MCFD2-210ENST00000417180 SNAPC4Q5SXM2 1469 aa22.88■■□□□ 1.25
MCFD2-210ENST00000417180 GAPVD1Q14C86 1478 aa22.87■■□□□ 1.25
MCFD2-210ENST00000417180 MAGI1Q96QZ7 1491 aaPredicted RBP22.86■■□□□ 1.25
MCFD2-210ENST00000417180 TOP2BQ02880 1626 aa22.85■■□□□ 1.25
MCFD2-210ENST00000417180 CHD1O14646 1710 aa22.82■■□□□ 1.24
MCFD2-210ENST00000417180 BIVM-ERCC5R4GMW8 1640 aa22.81■■□□□ 1.24
MCFD2-210ENST00000417180 SYNJ1O43426 1573 aa22.8■■□□□ 1.24
MCFD2-210ENST00000417180 SYNJ2O15056 1496 aa22.79■■□□□ 1.24
MCFD2-210ENST00000417180 ARHGEF11O15085 1522 aa22.76■■□□□ 1.23
MCFD2-210ENST00000417180 RIMBP3CA6NJZ7 1639 aa22.75■■□□□ 1.23
MCFD2-210ENST00000417180 RIMBP3BA6NNM3 1639 aa22.75■■□□□ 1.23
MCFD2-210ENST00000417180 ABCA5Q8WWZ7 1642 aa22.75■■□□□ 1.23
MCFD2-210ENST00000417180 RIMBP3Q9UFD9 1639 aa22.75■■□□□ 1.23
MCFD2-210ENST00000417180 PBRM1Q86U86 1689 aa22.7■■□□□ 1.22
MCFD2-210ENST00000417180 CYB5RLQ6IPT4 315 aa22.68■■□□□ 1.22
MCFD2-210ENST00000417180 CLASP1Q7Z460 1538 aa22.64■■□□□ 1.21
MCFD2-210ENST00000417180 FHAD1B1AJZ9 1412 aa22.62■■□□□ 1.21
MCFD2-210ENST00000417180 ERICH3Q5RHP9 1530 aa22.61■■□□□ 1.21
MCFD2-210ENST00000417180 GRIN2AQ12879 1464 aa22.59■■□□□ 1.21
MCFD2-210ENST00000417180 ARAP1Q96P48 1450 aa22.56■■□□□ 1.2
MCFD2-210ENST00000417180 ADAMTS12P58397 1594 aa22.55■■□□□ 1.2
MCFD2-210ENST00000417180 NUP160Q12769 1436 aa22.52■■□□□ 1.2
MCFD2-210ENST00000417180 KIF27Q86VH2 1401 aa22.49■■□□□ 1.19
MCFD2-210ENST00000417180 IGF1RP08069 1367 aa22.48■■□□□ 1.19
MCFD2-210ENST00000417180 CEP170Q5SW79 1584 aa22.44■■□□□ 1.18
MCFD2-210ENST00000417180 JPH4Q96JJ6 628 aa22.39■■□□□ 1.17
MCFD2-210ENST00000417180 CARMIL1Q5VZK9 1371 aa22.33■■□□□ 1.17
MCFD2-210ENST00000417180 TRHP20396 242 aaPredicted RBP22.32■■□□□ 1.16
MCFD2-210ENST00000417180 SHROOM2Q13796 1616 aa22.31■■□□□ 1.16
MCFD2-210ENST00000417180 PRG4Q92954 1404 aaPredicted RBP22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms