RNA–Protein interactions for RNA: ENST00000417094.5

TSFM-202, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

TSL 4

Gene TSFM, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-202ENST00000417094 NISCHQ9Y2I1 1504 aa24.2■■□□□ 1.46
TSFM-202ENST00000417094 CCDC180Q9P1Z9 1646 aa21.88■■□□□ 1.09
TSFM-202ENST00000417094 ABCC9O60706 1549 aa21.8■■□□□ 1.08
TSFM-202ENST00000417094 RB1CC1Q8TDY2 1594 aa20.8■□□□□ 0.92
TSFM-202ENST00000417094 NACADO15069 1562 aa20.66■□□□□ 0.9
TSFM-202ENST00000417094 DNAJC5BQ9UF47 199 aa20.55■□□□□ 0.88
TSFM-202ENST00000417094 MYO15BQ96JP2 1530 aa20.43■□□□□ 0.86
TSFM-202ENST00000417094 UNC13AQ9UPW8 1703 aa20.36■□□□□ 0.85
TSFM-202ENST00000417094 BICRAQ9NZM4 1560 aa20.23■□□□□ 0.83
TSFM-202ENST00000417094 PABPN1Q86U42 306 aaKnown RBP eCLIP20.19■□□□□ 0.82
TSFM-202ENST00000417094 DCAF8L2P0C7V8 631 aa20.17■□□□□ 0.82
TSFM-202ENST00000417094 DCAF1Q9Y4B6 1507 aa20.08■□□□□ 0.81
TSFM-202ENST00000417094 ZCCHC6Q5VYS8 1495 aaKnown RBP20.06■□□□□ 0.8
TSFM-202ENST00000417094 SHROOM4Q9ULL8 1493 aa20.05■□□□□ 0.8
TSFM-202ENST00000417094 SCRIBQ14160 1630 aa19.77■□□□□ 0.76
TSFM-202ENST00000417094 CC2D2AQ9P2K1 1620 aa19.76■□□□□ 0.75
TSFM-202ENST00000417094 EIF4G1Q04637 1599 aaKnown RBP19.72■□□□□ 0.75
TSFM-202ENST00000417094 CECR2Q9BXF3 1484 aa19.7■□□□□ 0.74
TSFM-202ENST00000417094 NCAPD3P42695 1498 aa19.06■□□□□ 0.64
TSFM-202ENST00000417094 DNAJC5Q9H3Z4 198 aa19.03■□□□□ 0.64
TSFM-202ENST00000417094 CUX2O14529 1486 aa18.97■□□□□ 0.63
TSFM-202ENST00000417094 ATAD2BQ9ULI0 1458 aa18.95■□□□□ 0.62
TSFM-202ENST00000417094 HMGXB3Q12766 1538 aa18.95■□□□□ 0.62
TSFM-202ENST00000417094 SMARCA2P51531 1590 aa18.92■□□□□ 0.62
TSFM-202ENST00000417094 SMARCA4P51532 1647 aa18.92■□□□□ 0.62
TSFM-202ENST00000417094 ERCC6Q03468 1493 aa18.84■□□□□ 0.61
TSFM-202ENST00000417094 PEG3Q9GZU2 1588 aa18.82■□□□□ 0.6
TSFM-202ENST00000417094 BAZ1AQ9NRL2 1556 aaPredicted RBP18.81■□□□□ 0.6
TSFM-202ENST00000417094 BAZ1BQ9UIG0 1483 aaKnown RBP18.73■□□□□ 0.59
TSFM-202ENST00000417094 NESP48681 1621 aa18.71■□□□□ 0.58
TSFM-202ENST00000417094 THOC2Q8NI27 1593 aaKnown RBP18.67■□□□□ 0.58
TSFM-202ENST00000417094 LAMC3Q9Y6N6 1575 aa18.67■□□□□ 0.58
TSFM-202ENST00000417094 MROH2BQ7Z745 1585 aa18.6■□□□□ 0.57
TSFM-202ENST00000417094 KIF21AQ7Z4S6 1674 aa18.53■□□□□ 0.56
TSFM-202ENST00000417094 PDS5BQ9NTI5 1447 aa18.49■□□□□ 0.55
TSFM-202ENST00000417094 CADPSQ9ULU8 1353 aa18.42■□□□□ 0.54
TSFM-202ENST00000417094 WDR62O43379 1518 aa18.38■□□□□ 0.53
TSFM-202ENST00000417094 MRC2Q9UBG0 1479 aa18.37■□□□□ 0.53
TSFM-202ENST00000417094 WIZO95785 1651 aa18.36■□□□□ 0.53
TSFM-202ENST00000417094 CEP164Q9UPV0 1460 aa18.25■□□□□ 0.51
TSFM-202ENST00000417094 CFTRP13569 1480 aa18.22■□□□□ 0.51
TSFM-202ENST00000417094 FANCD2Q9BXW9 1451 aa18.2■□□□□ 0.5
TSFM-202ENST00000417094 TOP2AP11388 1531 aaKnown RBP18.18■□□□□ 0.5
TSFM-202ENST00000417094 RSF1Q96T23 1441 aaPredicted RBP18.16■□□□□ 0.5
TSFM-202ENST00000417094 PRDM2Q13029 1718 aa18.09■□□□□ 0.49
TSFM-202ENST00000417094 URB2Q14146 1524 aaKnown RBP18.08■□□□□ 0.49
TSFM-202ENST00000417094 TRIM41Q8WV44 630 aa17.97■□□□□ 0.47
TSFM-202ENST00000417094 OSCARQ8IYS5 282 aa17.94■□□□□ 0.46
TSFM-202ENST00000417094 CCDC88BA6NC98 1476 aa17.91■□□□□ 0.46
TSFM-202ENST00000417094 IFT140Q96RY7 1462 aa17.91■□□□□ 0.46
TSFM-202ENST00000417094 TOPBP1Q92547 1522 aa17.86■□□□□ 0.45
TSFM-202ENST00000417094 ABCC8Q09428 1581 aa17.85■□□□□ 0.45
TSFM-202ENST00000417094 ZNF608Q9ULD9 1512 aaPredicted RBP17.84■□□□□ 0.45
TSFM-202ENST00000417094 RIMBP3CA6NJZ7 1639 aa17.83■□□□□ 0.44
TSFM-202ENST00000417094 RIMBP3BA6NNM3 1639 aa17.83■□□□□ 0.44
TSFM-202ENST00000417094 RIMBP3Q9UFD9 1639 aa17.83■□□□□ 0.44
TSFM-202ENST00000417094 DNMBPQ6XZF7 1577 aa17.82■□□□□ 0.44
TSFM-202ENST00000417094 EIF4G3O43432 1585 aaKnown RBP17.8■□□□□ 0.44
TSFM-202ENST00000417094 TARBP1Q13395 1621 aaKnown RBP17.76■□□□□ 0.43
TSFM-202ENST00000417094 ARHGEF11O15085 1522 aa17.75■□□□□ 0.43
TSFM-202ENST00000417094 CHD1O14646 1710 aa17.68■□□□□ 0.42
TSFM-202ENST00000417094 POLA1P09884 1462 aaPredicted RBP17.67■□□□□ 0.42
TSFM-202ENST00000417094 WDR97A6NE52 1622 aa17.65■□□□□ 0.42
TSFM-202ENST00000417094 AQRO60306 1485 aaKnown RBP eCLIP17.63■□□□□ 0.411e-6■■■■■ 41.2
TSFM-202ENST00000417094 ARAP1Q96P48 1450 aa17.57■□□□□ 0.4
TSFM-202ENST00000417094 RAD54L2Q9Y4B4 1467 aa17.54■□□□□ 0.4
TSFM-202ENST00000417094 SOGA1O94964 1423 aa17.53■□□□□ 0.4
TSFM-202ENST00000417094 CLASP1Q7Z460 1538 aa17.52■□□□□ 0.4
TSFM-202ENST00000417094 FGD5Q6ZNL6 1462 aa17.52■□□□□ 0.4
TSFM-202ENST00000417094 MAGI1Q96QZ7 1491 aaPredicted RBP17.5■□□□□ 0.39
TSFM-202ENST00000417094 CUX1P39880 1505 aa17.5■□□□□ 0.39
TSFM-202ENST00000417094 SNAPC4Q5SXM2 1469 aa17.5■□□□□ 0.39
TSFM-202ENST00000417094 TDRD9Q8NDG6 1382 aaKnown RBP17.48■□□□□ 0.39
TSFM-202ENST00000417094 CYB5RLQ6IPT4 315 aa17.47■□□□□ 0.39
TSFM-202ENST00000417094 SYNJ1O43426 1573 aa17.46■□□□□ 0.39
TSFM-202ENST00000417094 GRIN2BQ13224 1484 aa17.44■□□□□ 0.38
TSFM-202ENST00000417094 SYNJ2O15056 1496 aa17.43■□□□□ 0.38
TSFM-202ENST00000417094 FBLN2P98095 1184 aa17.41■□□□□ 0.38
TSFM-202ENST00000417094 PBRM1Q86U86 1689 aa17.4■□□□□ 0.38
TSFM-202ENST00000417094 ABCA5Q8WWZ7 1642 aa17.38■□□□□ 0.37
TSFM-202ENST00000417094 ABCA10Q8WWZ4 1543 aa17.37■□□□□ 0.37
TSFM-202ENST00000417094 GAPVD1Q14C86 1478 aa17.34■□□□□ 0.37
TSFM-202ENST00000417094 CHMP7Q8WUX9 453 aaPredicted RBP17.34■□□□□ 0.37
TSFM-202ENST00000417094 TRHP20396 242 aaPredicted RBP17.28■□□□□ 0.36
TSFM-202ENST00000417094 BIVM-ERCC5R4GMW8 1640 aa17.25■□□□□ 0.35
TSFM-202ENST00000417094 ADAMTS12P58397 1594 aa17.24■□□□□ 0.35
TSFM-202ENST00000417094 GRIN2AQ12879 1464 aa17.23■□□□□ 0.35
TSFM-202ENST00000417094 TOP2BQ02880 1626 aa17.22■□□□□ 0.35
TSFM-202ENST00000417094 NUP160Q12769 1436 aa17.21■□□□□ 0.35
TSFM-202ENST00000417094 WRNQ14191 1432 aaPredicted RBP eCLIP17.21■□□□□ 0.34
TSFM-202ENST00000417094 SHROOM2Q13796 1616 aa17.19■□□□□ 0.34
TSFM-202ENST00000417094 CEP170Q5SW79 1584 aa17.19■□□□□ 0.34
TSFM-202ENST00000417094 ERCC6L2Q5T890 1561 aa17.16■□□□□ 0.34
TSFM-202ENST00000417094 ERICH3Q5RHP9 1530 aa17.16■□□□□ 0.34
TSFM-202ENST00000417094 FHAD1B1AJZ9 1412 aa17.14■□□□□ 0.33
TSFM-202ENST00000417094 SUPT5HO00267 1087 aaKnown RBP17.03■□□□□ 0.32
TSFM-202ENST00000417094 RUSC2Q8N2Y8 1516 aa17.01■□□□□ 0.31
TSFM-202ENST00000417094 KIF13AQ9H1H9 1805 aa16.99■□□□□ 0.31
TSFM-202ENST00000417094 PRG4Q92954 1404 aaPredicted RBP16.96■□□□□ 0.31
TSFM-202ENST00000417094 MAPKBP1O60336 1514 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms