RNA–Protein interactions for RNA: ENST00000417089.5

H19-205, H19, imprinted maternally expressed transcript, humanhuman

TSL 5

Gene H19, Length 1,444 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H19-205ENST00000417089 NISCHQ9Y2I1 1504 aa49.78■■■■■ 5.56
H19-205ENST00000417089 CCDC180Q9P1Z9 1646 aa44.28■■■■■ 4.68
H19-205ENST00000417089 ABCC9O60706 1549 aa43.37■■■■■ 4.53
H19-205ENST00000417089 RB1CC1Q8TDY2 1594 aa41.67■■■■■ 4.26
H19-205ENST00000417089 NACADO15069 1562 aa41.63■■■■■ 4.25
H19-205ENST00000417089 ZCCHC6Q5VYS8 1495 aaKnown RBP41.49■■■■■ 4.23
H19-205ENST00000417089 DCAF8L2P0C7V8 631 aa41.46■■■■■ 4.23
H19-205ENST00000417089 MYO15BQ96JP2 1530 aa41.39■■■■■ 4.22
H19-205ENST00000417089 DCAF1Q9Y4B6 1507 aa41.2■■■■■ 4.19
H19-205ENST00000417089 UNC13AQ9UPW8 1703 aa40.81■■■■■ 4.12
H19-205ENST00000417089 BICRAQ9NZM4 1560 aa40.51■■■■■ 4.08
H19-205ENST00000417089 PABPN1Q86U42 306 aaKnown RBP eCLIP40.5■■■■■ 4.07
H19-205ENST00000417089 SCRIBQ14160 1630 aa40.4■■■■■ 4.06
H19-205ENST00000417089 SHROOM4Q9ULL8 1493 aa40.02■■■■■ 4
H19-205ENST00000417089 DNAJC5BQ9UF47 199 aa39.91■■■■□ 3.98
H19-205ENST00000417089 EIF4G1Q04637 1599 aaKnown RBP39.4■■■■□ 3.9
H19-205ENST00000417089 CC2D2AQ9P2K1 1620 aa39.26■■■■□ 3.87
H19-205ENST00000417089 CECR2Q9BXF3 1484 aa38.97■■■■□ 3.83
H19-205ENST00000417089 SMARCA4P51532 1647 aa38.65■■■■□ 3.78
H19-205ENST00000417089 BAZ1AQ9NRL2 1556 aaPredicted RBP38.56■■■■□ 3.76
H19-205ENST00000417089 ATAD2BQ9ULI0 1458 aa38.45■■■■□ 3.75
H19-205ENST00000417089 NCAPD3P42695 1498 aa38.43■■■■□ 3.74
H19-205ENST00000417089 MROH2BQ7Z745 1585 aa38.39■■■■□ 3.74
H19-205ENST00000417089 SMARCA2P51531 1590 aa38.37■■■■□ 3.73
H19-205ENST00000417089 PEG3Q9GZU2 1588 aa38.3■■■■□ 3.72
H19-205ENST00000417089 HMGXB3Q12766 1538 aa38.25■■■■□ 3.71
H19-205ENST00000417089 BAZ1BQ9UIG0 1483 aaKnown RBP38.1■■■■□ 3.69
H19-205ENST00000417089 WIZO95785 1651 aa37.96■■■■□ 3.67
H19-205ENST00000417089 RSF1Q96T23 1441 aaPredicted RBP37.91■■■■□ 3.66
H19-205ENST00000417089 NESP48681 1621 aa37.55■■■■□ 3.6
H19-205ENST00000417089 TOP2AP11388 1531 aaKnown RBP37.55■■■■□ 3.6
H19-205ENST00000417089 LAMC3Q9Y6N6 1575 aa37.4■■■■□ 3.58
H19-205ENST00000417089 ERCC6Q03468 1493 aa37.34■■■■□ 3.57
H19-205ENST00000417089 CADPSQ9ULU8 1353 aa37.29■■■■□ 3.56
H19-205ENST00000417089 PDS5BQ9NTI5 1447 aa37.11■■■■□ 3.53
H19-205ENST00000417089 KIF21AQ7Z4S6 1674 aa37.1■■■■□ 3.53
H19-205ENST00000417089 CCDC88BA6NC98 1476 aa37.1■■■■□ 3.53
H19-205ENST00000417089 CFTRP13569 1480 aa37.09■■■■□ 3.53
H19-205ENST00000417089 THOC2Q8NI27 1593 aaKnown RBP37.02■■■■□ 3.52
H19-205ENST00000417089 CUX2O14529 1486 aa37.01■■■■□ 3.51
H19-205ENST00000417089 FANCD2Q9BXW9 1451 aa36.87■■■■□ 3.49
H19-205ENST00000417089 CEP164Q9UPV0 1460 aa36.81■■■■□ 3.48
H19-205ENST00000417089 SUPT5HO00267 1087 aaKnown RBP36.8■■■■□ 3.48
H19-205ENST00000417089 PRDM2Q13029 1718 aa36.8■■■■□ 3.48
H19-205ENST00000417089 MRC2Q9UBG0 1479 aa36.78■■■■□ 3.48
H19-205ENST00000417089 WDR62O43379 1518 aa36.71■■■■□ 3.47
H19-205ENST00000417089 URB2Q14146 1524 aaKnown RBP36.54■■■■□ 3.44
H19-205ENST00000417089 TOPBP1Q92547 1522 aa36.29■■■■□ 3.4
H19-205ENST00000417089 DNMBPQ6XZF7 1577 aa36.23■■■■□ 3.39
H19-205ENST00000417089 ABCC8Q09428 1581 aa36.21■■■■□ 3.39
H19-205ENST00000417089 IFT140Q96RY7 1462 aa36.04■■■■□ 3.36
H19-205ENST00000417089 CUX1P39880 1505 aa36.02■■■■□ 3.36
H19-205ENST00000417089 POLA1P09884 1462 aaPredicted RBP35.99■■■■□ 3.35
H19-205ENST00000417089 ZNF608Q9ULD9 1512 aaPredicted RBP35.94■■■■□ 3.34
H19-205ENST00000417089 TARBP1Q13395 1621 aaKnown RBP35.93■■■■□ 3.34
H19-205ENST00000417089 DNAJC5Q9H3Z4 198 aa35.92■■■■□ 3.34
H19-205ENST00000417089 FGD5Q6ZNL6 1462 aa35.87■■■■□ 3.33
H19-205ENST00000417089 RAD54L2Q9Y4B4 1467 aa35.82■■■■□ 3.33
H19-205ENST00000417089 EIF4G3O43432 1585 aaKnown RBP35.79■■■■□ 3.32
H19-205ENST00000417089 SOGA1O94964 1423 aa35.78■■■■□ 3.32
H19-205ENST00000417089 WRNQ14191 1432 aaPredicted RBP eCLIP35.71■■■■□ 3.31
H19-205ENST00000417089 AQRO60306 1485 aaKnown RBP eCLIP35.69■■■■□ 3.3
H19-205ENST00000417089 SYNJ1O43426 1573 aa35.68■■■■□ 3.3
H19-205ENST00000417089 TOP2BQ02880 1626 aa35.67■■■■□ 3.3
H19-205ENST00000417089 BIVM-ERCC5R4GMW8 1640 aa35.67■■■■□ 3.3
H19-205ENST00000417089 WDR97A6NE52 1622 aa35.63■■■■□ 3.29
H19-205ENST00000417089 TDRD9Q8NDG6 1382 aaKnown RBP35.61■■■■□ 3.29
H19-205ENST00000417089 ABCA10Q8WWZ4 1543 aa35.53■■■■□ 3.28
H19-205ENST00000417089 ABCA5Q8WWZ7 1642 aa35.42■■■■□ 3.26
H19-205ENST00000417089 OSCARQ8IYS5 282 aa35.4■■■■□ 3.26
H19-205ENST00000417089 GRIN2BQ13224 1484 aa35.38■■■■□ 3.25
H19-205ENST00000417089 GAPVD1Q14C86 1478 aa35.38■■■■□ 3.25
H19-205ENST00000417089 SNAPC4Q5SXM2 1469 aa35.36■■■■□ 3.25
H19-205ENST00000417089 PBRM1Q86U86 1689 aa35.34■■■■□ 3.25
H19-205ENST00000417089 CHD1O14646 1710 aa35.33■■■■□ 3.25
H19-205ENST00000417089 MAGI1Q96QZ7 1491 aaPredicted RBP35.31■■■■□ 3.24
H19-205ENST00000417089 FBLN2P98095 1184 aa35.18■■■■□ 3.22
H19-205ENST00000417089 SYNJ2O15056 1496 aa35.18■■■■□ 3.22
H19-205ENST00000417089 ERICH3Q5RHP9 1530 aa35.09■■■■□ 3.21
H19-205ENST00000417089 CHMP7Q8WUX9 453 aaPredicted RBP35.08■■■■□ 3.21
H19-205ENST00000417089 ADAMTS12P58397 1594 aa35.08■■■■□ 3.21
H19-205ENST00000417089 CLASP1Q7Z460 1538 aa34.98■■■■□ 3.19
H19-205ENST00000417089 FHAD1B1AJZ9 1412 aa34.97■■■■□ 3.19
H19-205ENST00000417089 GRIN2AQ12879 1464 aa34.95■■■■□ 3.19
H19-205ENST00000417089 KIF27Q86VH2 1401 aa34.94■■■■□ 3.18
H19-205ENST00000417089 RIMBP3CA6NJZ7 1639 aa34.93■■■■□ 3.18
H19-205ENST00000417089 RIMBP3BA6NNM3 1639 aa34.93■■■■□ 3.18
H19-205ENST00000417089 RIMBP3Q9UFD9 1639 aa34.93■■■■□ 3.18
H19-205ENST00000417089 ARHGEF11O15085 1522 aa34.92■■■■□ 3.18
H19-205ENST00000417089 IGF1RP08069 1367 aa34.85■■■■□ 3.17
H19-205ENST00000417089 NUP160Q12769 1436 aa34.82■■■■□ 3.17
H19-205ENST00000417089 CEP170Q5SW79 1584 aa34.81■■■■□ 3.16
H19-205ENST00000417089 CUL7Q14999 1698 aa34.75■■■■□ 3.15
H19-205ENST00000417089 TRIM41Q8WV44 630 aa34.74■■■■□ 3.15
H19-205ENST00000417089 RUSC2Q8N2Y8 1516 aa34.68■■■■□ 3.14
H19-205ENST00000417089 ARAP1Q96P48 1450 aa34.65■■■■□ 3.14
H19-205ENST00000417089 CARMIL1Q5VZK9 1371 aa34.61■■■■□ 3.13
H19-205ENST00000417089 SHROOM2Q13796 1616 aa34.58■■■■□ 3.13
H19-205ENST00000417089 CYB5RLQ6IPT4 315 aa34.52■■■■□ 3.12
H19-205ENST00000417089 ERCC6L2Q5T890 1561 aa34.51■■■■□ 3.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms