RNA–Protein interactions for RNA: ENST00000417066.5

CCDC148-204, Transcript of coiled-coil domain containing 148, humanhuman

TSL 1 (best)

Gene CCDC148, Length 1,447 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148-204ENST00000417066 NISCHQ9Y2I1 1504 aa46.4■■■■■ 5.02
CCDC148-204ENST00000417066 CCDC180Q9P1Z9 1646 aa41.13■■■■■ 4.18
CCDC148-204ENST00000417066 ABCC9O60706 1549 aa40.48■■■■■ 4.07
CCDC148-204ENST00000417066 DCAF8L2P0C7V8 631 aa38.96■■■■□ 3.83
CCDC148-204ENST00000417066 RB1CC1Q8TDY2 1594 aa38.79■■■■□ 3.8
CCDC148-204ENST00000417066 NACADO15069 1562 aa38.74■■■■□ 3.79
CCDC148-204ENST00000417066 ZCCHC6Q5VYS8 1495 aaKnown RBP38.62■■■■□ 3.77
CCDC148-204ENST00000417066 MYO15BQ96JP2 1530 aa38.46■■■■□ 3.75
CCDC148-204ENST00000417066 DCAF1Q9Y4B6 1507 aa38.3■■■■□ 3.72
CCDC148-204ENST00000417066 UNC13AQ9UPW8 1703 aa37.93■■■■□ 3.66
CCDC148-204ENST00000417066 PABPN1Q86U42 306 aaKnown RBP eCLIP37.91■■■■□ 3.66
CCDC148-204ENST00000417066 BICRAQ9NZM4 1560 aa37.69■■■■□ 3.62
CCDC148-204ENST00000417066 SCRIBQ14160 1630 aa37.68■■■■□ 3.62
CCDC148-204ENST00000417066 DNAJC5BQ9UF47 199 aa37.28■■■■□ 3.56
CCDC148-204ENST00000417066 SHROOM4Q9ULL8 1493 aa37.12■■■■□ 3.53
CCDC148-204ENST00000417066 EIF4G1Q04637 1599 aaKnown RBP36.67■■■■□ 3.46
CCDC148-204ENST00000417066 CC2D2AQ9P2K1 1620 aa36.55■■■■□ 3.44
CCDC148-204ENST00000417066 CECR2Q9BXF3 1484 aa36.33■■■■□ 3.41
CCDC148-204ENST00000417066 SMARCA4P51532 1647 aa35.99■■■■□ 3.35
CCDC148-204ENST00000417066 BAZ1AQ9NRL2 1556 aaPredicted RBP35.93■■■■□ 3.34
CCDC148-204ENST00000417066 ATAD2BQ9ULI0 1458 aa35.84■■■■□ 3.33
CCDC148-204ENST00000417066 MROH2BQ7Z745 1585 aa35.82■■■■□ 3.32
CCDC148-204ENST00000417066 NCAPD3P42695 1498 aa35.79■■■■□ 3.32
CCDC148-204ENST00000417066 SMARCA2P51531 1590 aa35.72■■■■□ 3.31
CCDC148-204ENST00000417066 PEG3Q9GZU2 1588 aa35.59■■■■□ 3.29
CCDC148-204ENST00000417066 HMGXB3Q12766 1538 aa35.56■■■■□ 3.28
CCDC148-204ENST00000417066 BAZ1BQ9UIG0 1483 aaKnown RBP35.52■■■■□ 3.28
CCDC148-204ENST00000417066 WIZO95785 1651 aa35.41■■■■□ 3.26
CCDC148-204ENST00000417066 RSF1Q96T23 1441 aaPredicted RBP35.39■■■■□ 3.26
CCDC148-204ENST00000417066 NESP48681 1621 aa35.04■■■■□ 3.2
CCDC148-204ENST00000417066 TOP2AP11388 1531 aaKnown RBP34.97■■■■□ 3.19
CCDC148-204ENST00000417066 ERCC6Q03468 1493 aa34.84■■■■□ 3.17
CCDC148-204ENST00000417066 LAMC3Q9Y6N6 1575 aa34.8■■■■□ 3.16
CCDC148-204ENST00000417066 CADPSQ9ULU8 1353 aa34.79■■■■□ 3.16
CCDC148-204ENST00000417066 CCDC88BA6NC98 1476 aa34.64■■■■□ 3.14
CCDC148-204ENST00000417066 PDS5BQ9NTI5 1447 aa34.62■■■■□ 3.13
CCDC148-204ENST00000417066 SUPT5HO00267 1087 aaKnown RBP34.6■■■■□ 3.13
CCDC148-204ENST00000417066 CFTRP13569 1480 aa34.55■■■■□ 3.12
CCDC148-204ENST00000417066 KIF21AQ7Z4S6 1674 aa34.52■■■■□ 3.12
CCDC148-204ENST00000417066 CUX2O14529 1486 aa34.41■■■■□ 3.1
CCDC148-204ENST00000417066 THOC2Q8NI27 1593 aaKnown RBP34.4■■■■□ 3.1
CCDC148-204ENST00000417066 FANCD2Q9BXW9 1451 aa34.39■■■■□ 3.1
CCDC148-204ENST00000417066 CEP164Q9UPV0 1460 aa34.31■■■■□ 3.08
CCDC148-204ENST00000417066 MRC2Q9UBG0 1479 aa34.26■■■■□ 3.08
CCDC148-204ENST00000417066 PRDM2Q13029 1718 aa34.16■■■■□ 3.06
CCDC148-204ENST00000417066 WDR62O43379 1518 aa34.13■■■■□ 3.05
CCDC148-204ENST00000417066 URB2Q14146 1524 aaKnown RBP34.06■■■■□ 3.04
CCDC148-204ENST00000417066 TOPBP1Q92547 1522 aa33.83■■■■□ 3.01
CCDC148-204ENST00000417066 DNMBPQ6XZF7 1577 aa33.74■■■□□ 2.99
CCDC148-204ENST00000417066 ABCC8Q09428 1581 aa33.73■■■□□ 2.99
CCDC148-204ENST00000417066 CUX1P39880 1505 aa33.59■■■□□ 2.97
CCDC148-204ENST00000417066 IFT140Q96RY7 1462 aa33.58■■■□□ 2.97
CCDC148-204ENST00000417066 POLA1P09884 1462 aaPredicted RBP33.54■■■□□ 2.96
CCDC148-204ENST00000417066 ZNF608Q9ULD9 1512 aaPredicted RBP33.53■■■□□ 2.96
CCDC148-204ENST00000417066 DNAJC5Q9H3Z4 198 aa33.5■■■□□ 2.95
CCDC148-204ENST00000417066 FGD5Q6ZNL6 1462 aa33.47■■■□□ 2.95
CCDC148-204ENST00000417066 RAD54L2Q9Y4B4 1467 aa33.46■■■□□ 2.95
CCDC148-204ENST00000417066 SOGA1O94964 1423 aa33.43■■■□□ 2.94
CCDC148-204ENST00000417066 TARBP1Q13395 1621 aaKnown RBP33.43■■■□□ 2.94
CCDC148-204ENST00000417066 WRNQ14191 1432 aaPredicted RBP eCLIP33.35■■■□□ 2.93
CCDC148-204ENST00000417066 AQRO60306 1485 aaKnown RBP eCLIP33.34■■■□□ 2.93
CCDC148-204ENST00000417066 EIF4G3O43432 1585 aaKnown RBP33.3■■■□□ 2.92
CCDC148-204ENST00000417066 TDRD9Q8NDG6 1382 aaKnown RBP33.29■■■□□ 2.92
CCDC148-204ENST00000417066 SYNJ1O43426 1573 aa33.27■■■□□ 2.92
CCDC148-204ENST00000417066 TOP2BQ02880 1626 aa33.23■■■□□ 2.91
CCDC148-204ENST00000417066 BIVM-ERCC5R4GMW8 1640 aa33.2■■■□□ 2.91
CCDC148-204ENST00000417066 ABCA10Q8WWZ4 1543 aa33.11■■■□□ 2.89
CCDC148-204ENST00000417066 WDR97A6NE52 1622 aa33.1■■■□□ 2.89
CCDC148-204ENST00000417066 OSCARQ8IYS5 282 aa33.09■■■□□ 2.89
CCDC148-204ENST00000417066 GAPVD1Q14C86 1478 aa33.02■■■□□ 2.88
CCDC148-204ENST00000417066 FBLN2P98095 1184 aa33■■■□□ 2.87
CCDC148-204ENST00000417066 GRIN2BQ13224 1484 aa32.99■■■□□ 2.87
CCDC148-204ENST00000417066 SNAPC4Q5SXM2 1469 aa32.99■■■□□ 2.87
CCDC148-204ENST00000417066 ABCA5Q8WWZ7 1642 aa32.95■■■□□ 2.87
CCDC148-204ENST00000417066 PBRM1Q86U86 1689 aa32.88■■■□□ 2.85
CCDC148-204ENST00000417066 CHD1O14646 1710 aa32.88■■■□□ 2.85
CCDC148-204ENST00000417066 MAGI1Q96QZ7 1491 aaPredicted RBP32.88■■■□□ 2.85
CCDC148-204ENST00000417066 CHMP7Q8WUX9 453 aaPredicted RBP32.85■■■□□ 2.85
CCDC148-204ENST00000417066 SYNJ2O15056 1496 aa32.78■■■□□ 2.84
CCDC148-204ENST00000417066 ERICH3Q5RHP9 1530 aa32.68■■■□□ 2.82
CCDC148-204ENST00000417066 ADAMTS12P58397 1594 aa32.64■■■□□ 2.82
CCDC148-204ENST00000417066 KIF27Q86VH2 1401 aa32.63■■■□□ 2.81
CCDC148-204ENST00000417066 FHAD1B1AJZ9 1412 aa32.62■■■□□ 2.81
CCDC148-204ENST00000417066 TRIM41Q8WV44 630 aa32.61■■■□□ 2.81
CCDC148-204ENST00000417066 GRIN2AQ12879 1464 aa32.58■■■□□ 2.81
CCDC148-204ENST00000417066 IGF1RP08069 1367 aa32.57■■■□□ 2.8
CCDC148-204ENST00000417066 CLASP1Q7Z460 1538 aa32.53■■■□□ 2.8
CCDC148-204ENST00000417066 ARHGEF11O15085 1522 aa32.51■■■□□ 2.79
CCDC148-204ENST00000417066 RIMBP3CA6NJZ7 1639 aa32.5■■■□□ 2.79
CCDC148-204ENST00000417066 RIMBP3BA6NNM3 1639 aa32.5■■■□□ 2.79
CCDC148-204ENST00000417066 RIMBP3Q9UFD9 1639 aa32.5■■■□□ 2.79
CCDC148-204ENST00000417066 RUSC2Q8N2Y8 1516 aa32.45■■■□□ 2.79
CCDC148-204ENST00000417066 NUP160Q12769 1436 aa32.43■■■□□ 2.78
CCDC148-204ENST00000417066 CEP170Q5SW79 1584 aa32.43■■■□□ 2.78
CCDC148-204ENST00000417066 CARMIL1Q5VZK9 1371 aa32.36■■■□□ 2.77
CCDC148-204ENST00000417066 CUL7Q14999 1698 aa32.34■■■□□ 2.77
CCDC148-204ENST00000417066 CYB5RLQ6IPT4 315 aa32.32■■■□□ 2.76
CCDC148-204ENST00000417066 ARAP1Q96P48 1450 aa32.27■■■□□ 2.76
CCDC148-204ENST00000417066 CHIC1Q5VXU3 224 aa32.24■■■□□ 2.75
CCDC148-204ENST00000417066 JPH4Q96JJ6 628 aa32.17■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms