RNA–Protein interactions for RNA: ENST00000416999.1

LINC-PINT-201, long intergenic non-protein coding RNA, p53 induced transcript, humanhuman

TSL 3

Gene LINC-PINT, Length 387 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC-PINT-201ENST00000416999 AEBP2Q6ZN18 517 aaPredicted RBP19.94■□□□□ 0.78
LINC-PINT-201ENST00000416999 CHIC1Q5VXU3 224 aa19.18■□□□□ 0.66
LINC-PINT-201ENST00000416999 NISCHQ9Y2I1 1504 aa18.59■□□□□ 0.57
LINC-PINT-201ENST00000416999 ABCC9O60706 1549 aa16.95■□□□□ 0.3
LINC-PINT-201ENST00000416999 SENP3Q9H4L4 574 aaPredicted RBP16.88■□□□□ 0.29
LINC-PINT-201ENST00000416999 PHF23Q9BUL5 403 aaPredicted RBP16.87■□□□□ 0.29
LINC-PINT-201ENST00000416999 CCDC180Q9P1Z9 1646 aa16.85■□□□□ 0.29
LINC-PINT-201ENST00000416999 RB1CC1Q8TDY2 1594 aa16.14■□□□□ 0.17
LINC-PINT-201ENST00000416999 DNAJC5BQ9UF47 199 aa16.03■□□□□ 0.16
LINC-PINT-201ENST00000416999 NACADO15069 1562 aa15.98■□□□□ 0.15
LINC-PINT-201ENST00000416999 DCAF8L2P0C7V8 631 aa15.75■□□□□ 0.11
LINC-PINT-201ENST00000416999 FOXD1Q16676 465 aa15.74■□□□□ 0.11
LINC-PINT-201ENST00000416999 PABPN1Q86U42 306 aaKnown RBP eCLIP15.71■□□□□ 0.11
LINC-PINT-201ENST00000416999 MYO15BQ96JP2 1530 aa15.71■□□□□ 0.11
LINC-PINT-201ENST00000416999 UNC13AQ9UPW8 1703 aa15.7■□□□□ 0.1
LINC-PINT-201ENST00000416999 BICRAQ9NZM4 1560 aa15.58■□□□□ 0.09
LINC-PINT-201ENST00000416999 SHROOM4Q9ULL8 1493 aa15.5■□□□□ 0.07
LINC-PINT-201ENST00000416999 PLPPR3Q6T4P5 718 aa15.43■□□□□ 0.06
LINC-PINT-201ENST00000416999 DCAF1Q9Y4B6 1507 aa15.41■□□□□ 0.06
LINC-PINT-201ENST00000416999 ZCCHC6Q5VYS8 1495 aaKnown RBP15.34■□□□□ 0.05
LINC-PINT-201ENST00000416999 CECR2Q9BXF3 1484 aa15.33■□□□□ 0.05
LINC-PINT-201ENST00000416999 CC2D2AQ9P2K1 1620 aa15.33■□□□□ 0.04
LINC-PINT-201ENST00000416999 EIF4G1Q04637 1599 aaKnown RBP15.25■□□□□ 0.03
LINC-PINT-201ENST00000416999 SCRIBQ14160 1630 aa15.23■□□□□ 0.03
LINC-PINT-201ENST00000416999 DNAJC5Q9H3Z4 198 aa15□□□□□ -0.01
LINC-PINT-201ENST00000416999 PPP6R1Q9UPN7 881 aa14.98□□□□□ -0.01
LINC-PINT-201ENST00000416999 ADRA2BP18089 450 aa14.93□□□□□ -0.02
LINC-PINT-201ENST00000416999 CUX2O14529 1486 aa14.8□□□□□ -0.04
LINC-PINT-201ENST00000416999 PIAS4Q8N2W9 510 aaPredicted RBP14.76□□□□□ -0.05
LINC-PINT-201ENST00000416999 NCAPD3P42695 1498 aa14.72□□□□□ -0.05
LINC-PINT-201ENST00000416999 ERCC6Q03468 1493 aa14.71□□□□□ -0.05
LINC-PINT-201ENST00000416999 SMARCA2P51531 1590 aa14.62□□□□□ -0.07
LINC-PINT-201ENST00000416999 ATAD2BQ9ULI0 1458 aa14.61□□□□□ -0.07
LINC-PINT-201ENST00000416999 HMGXB3Q12766 1538 aa14.61□□□□□ -0.07
LINC-PINT-201ENST00000416999 MSH5O43196 834 aa14.56□□□□□ -0.08
LINC-PINT-201ENST00000416999 SMARCA4P51532 1647 aa14.55□□□□□ -0.08
LINC-PINT-201ENST00000416999 BAZ1AQ9NRL2 1556 aaPredicted RBP14.48□□□□□ -0.09
LINC-PINT-201ENST00000416999 BAZ1BQ9UIG0 1483 aaKnown RBP14.48□□□□□ -0.09
LINC-PINT-201ENST00000416999 NESP48681 1621 aa14.46□□□□□ -0.09
LINC-PINT-201ENST00000416999 LAMC3Q9Y6N6 1575 aa14.45□□□□□ -0.1
LINC-PINT-201ENST00000416999 PEG3Q9GZU2 1588 aa14.44□□□□□ -0.1
LINC-PINT-201ENST00000416999 THOC2Q8NI27 1593 aaKnown RBP14.42□□□□□ -0.1
LINC-PINT-201ENST00000416999 PDS5BQ9NTI5 1447 aa14.38□□□□□ -0.11
LINC-PINT-201ENST00000416999 KIF21AQ7Z4S6 1674 aa14.33□□□□□ -0.12
LINC-PINT-201ENST00000416999 MROH2BQ7Z745 1585 aa14.27□□□□□ -0.12
LINC-PINT-201ENST00000416999 CADPSQ9ULU8 1353 aa14.25□□□□□ -0.13
LINC-PINT-201ENST00000416999 MRC2Q9UBG0 1479 aa14.24□□□□□ -0.13
LINC-PINT-201ENST00000416999 TRIM41Q8WV44 630 aa14.2□□□□□ -0.14
LINC-PINT-201ENST00000416999 WDR62O43379 1518 aa14.2□□□□□ -0.14
LINC-PINT-201ENST00000416999 CEP164Q9UPV0 1460 aa14.13□□□□□ -0.15
LINC-PINT-201ENST00000416999 WIZO95785 1651 aa14.1□□□□□ -0.15
LINC-PINT-201ENST00000416999 FANCD2Q9BXW9 1451 aa14.08□□□□□ -0.16
LINC-PINT-201ENST00000416999 OSCARQ8IYS5 282 aa14.07□□□□□ -0.16
LINC-PINT-201ENST00000416999 CFTRP13569 1480 aa14.04□□□□□ -0.16
LINC-PINT-201ENST00000416999 TOP2AP11388 1531 aaKnown RBP13.95□□□□□ -0.18
LINC-PINT-201ENST00000416999 URB2Q14146 1524 aaKnown RBP13.94□□□□□ -0.18
LINC-PINT-201ENST00000416999 PRDM2Q13029 1718 aa13.93□□□□□ -0.18
LINC-PINT-201ENST00000416999 RSF1Q96T23 1441 aaPredicted RBP13.9□□□□□ -0.18
LINC-PINT-201ENST00000416999 IFT140Q96RY7 1462 aa13.87□□□□□ -0.19
LINC-PINT-201ENST00000416999 RIMBP3CA6NJZ7 1639 aa13.86□□□□□ -0.19
LINC-PINT-201ENST00000416999 RIMBP3BA6NNM3 1639 aa13.86□□□□□ -0.19
LINC-PINT-201ENST00000416999 RIMBP3Q9UFD9 1639 aa13.86□□□□□ -0.19
LINC-PINT-201ENST00000416999 ABCC8Q09428 1581 aa13.84□□□□□ -0.19
LINC-PINT-201ENST00000416999 ARHGEF11O15085 1522 aa13.8□□□□□ -0.2
LINC-PINT-201ENST00000416999 EHMT2Q96KQ7 1210 aa13.8□□□□□ -0.2
LINC-PINT-201ENST00000416999 ZNF608Q9ULD9 1512 aaPredicted RBP13.79□□□□□ -0.2
LINC-PINT-201ENST00000416999 TOPBP1Q92547 1522 aa13.78□□□□□ -0.2
LINC-PINT-201ENST00000416999 CCDC88BA6NC98 1476 aa13.76□□□□□ -0.21
LINC-PINT-201ENST00000416999 EIF4G3O43432 1585 aaKnown RBP13.75□□□□□ -0.21
LINC-PINT-201ENST00000416999 POTEDQ86YR6 584 aa13.74□□□□□ -0.21
LINC-PINT-201ENST00000416999 DNMBPQ6XZF7 1577 aa13.74□□□□□ -0.21
LINC-PINT-201ENST00000416999 CYB5RLQ6IPT4 315 aa13.7□□□□□ -0.22
LINC-PINT-201ENST00000416999 CHD1O14646 1710 aa13.69□□□□□ -0.22
LINC-PINT-201ENST00000416999 TARBP1Q13395 1621 aaKnown RBP13.68□□□□□ -0.22
LINC-PINT-201ENST00000416999 TRHP20396 242 aaPredicted RBP13.65□□□□□ -0.22
LINC-PINT-201ENST00000416999 AQRO60306 1485 aaKnown RBP eCLIP13.64□□□□□ -0.23
LINC-PINT-201ENST00000416999 FBLN2P98095 1184 aa13.63□□□□□ -0.23
LINC-PINT-201ENST00000416999 MAPK8IP2Q13387 824 aaPredicted RBP13.63□□□□□ -0.23
LINC-PINT-201ENST00000416999 WDR97A6NE52 1622 aa13.63□□□□□ -0.23
LINC-PINT-201ENST00000416999 ARAP1Q96P48 1450 aa13.62□□□□□ -0.23
LINC-PINT-201ENST00000416999 POLA1P09884 1462 aaPredicted RBP13.61□□□□□ -0.23
LINC-PINT-201ENST00000416999 PPP4R3CPQ6ZMV5 832 aa13.59□□□□□ -0.23
LINC-PINT-201ENST00000416999 SCAF1Q9H7N4 1312 aaKnown RBP13.58□□□□□ -0.24
LINC-PINT-201ENST00000416999 SOGA1O94964 1423 aa13.57□□□□□ -0.24
LINC-PINT-201ENST00000416999 SYNJ1O43426 1573 aa13.55□□□□□ -0.24
LINC-PINT-201ENST00000416999 MAGI1Q96QZ7 1491 aaPredicted RBP13.54□□□□□ -0.24
LINC-PINT-201ENST00000416999 CHMP7Q8WUX9 453 aaPredicted RBP13.53□□□□□ -0.24
LINC-PINT-201ENST00000416999 TDRD9Q8NDG6 1382 aaKnown RBP13.53□□□□□ -0.24
LINC-PINT-201ENST00000416999 RAD54L2Q9Y4B4 1467 aa13.53□□□□□ -0.24
LINC-PINT-201ENST00000416999 CLASP1Q7Z460 1538 aa13.53□□□□□ -0.24
LINC-PINT-201ENST00000416999 SNAPC4Q5SXM2 1469 aa13.52□□□□□ -0.25
LINC-PINT-201ENST00000416999 GRIN2BQ13224 1484 aa13.5□□□□□ -0.25
LINC-PINT-201ENST00000416999 FGD5Q6ZNL6 1462 aa13.49□□□□□ -0.25
LINC-PINT-201ENST00000416999 SYNJ2O15056 1496 aa13.48□□□□□ -0.25
LINC-PINT-201ENST00000416999 DMRT2Q9Y5R5 561 aa13.45□□□□□ -0.26
LINC-PINT-201ENST00000416999 CUX1P39880 1505 aa13.43□□□□□ -0.26
LINC-PINT-201ENST00000416999 KCNA4P22459 653 aa13.42□□□□□ -0.26
LINC-PINT-201ENST00000416999 PBRM1Q86U86 1689 aa13.41□□□□□ -0.26
LINC-PINT-201ENST00000416999 GAPVD1Q14C86 1478 aa13.41□□□□□ -0.26
LINC-PINT-201ENST00000416999 ABCA10Q8WWZ4 1543 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms