RNA–Protein interactions for RNA: ENST00000416995.1

LINC02558-201, Transcript of long intergenic non-protein coding RNA 2558, humanhuman

TSL 5

Gene LINC02558, Length 178 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02558-201ENST00000416995 NISCHQ9Y2I1 1504 aa38.26■■■■□ 3.72
LINC02558-201ENST00000416995 ABCC9O60706 1549 aa34.35■■■■□ 3.09
LINC02558-201ENST00000416995 CCDC180Q9P1Z9 1646 aa34.3■■■■□ 3.08
LINC02558-201ENST00000416995 RB1CC1Q8TDY2 1594 aa32.66■■■□□ 2.82
LINC02558-201ENST00000416995 NACADO15069 1562 aa32.45■■■□□ 2.78
LINC02558-201ENST00000416995 DCAF8L2P0C7V8 631 aa32.28■■■□□ 2.76
LINC02558-201ENST00000416995 DNAJC5BQ9UF47 199 aa32.28■■■□□ 2.76
LINC02558-201ENST00000416995 MYO15BQ96JP2 1530 aa32■■■□□ 2.71
LINC02558-201ENST00000416995 PABPN1Q86U42 306 aaKnown RBP eCLIP31.99■■■□□ 2.71
LINC02558-201ENST00000416995 UNC13AQ9UPW8 1703 aa31.95■■■□□ 2.7
LINC02558-201ENST00000416995 BICRAQ9NZM4 1560 aa31.76■■■□□ 2.67
LINC02558-201ENST00000416995 ZCCHC6Q5VYS8 1495 aaKnown RBP31.71■■■□□ 2.67
LINC02558-201ENST00000416995 DCAF1Q9Y4B6 1507 aa31.59■■■□□ 2.65
LINC02558-201ENST00000416995 SHROOM4Q9ULL8 1493 aa31.28■■■□□ 2.6
LINC02558-201ENST00000416995 SCRIBQ14160 1630 aa31.28■■■□□ 2.6
LINC02558-201ENST00000416995 CC2D2AQ9P2K1 1620 aa31.02■■■□□ 2.56
LINC02558-201ENST00000416995 EIF4G1Q04637 1599 aaKnown RBP30.96■■■□□ 2.55
LINC02558-201ENST00000416995 CECR2Q9BXF3 1484 aa30.94■■■□□ 2.54
LINC02558-201ENST00000416995 NCAPD3P42695 1498 aa29.97■■■□□ 2.39
LINC02558-201ENST00000416995 ATAD2BQ9ULI0 1458 aa29.89■■■□□ 2.38
LINC02558-201ENST00000416995 SMARCA4P51532 1647 aa29.84■■■□□ 2.37
LINC02558-201ENST00000416995 SMARCA2P51531 1590 aa29.77■■■□□ 2.36
LINC02558-201ENST00000416995 HMGXB3Q12766 1538 aa29.73■■■□□ 2.35
LINC02558-201ENST00000416995 BAZ1AQ9NRL2 1556 aaPredicted RBP29.68■■■□□ 2.34
LINC02558-201ENST00000416995 ERCC6Q03468 1493 aa29.63■■■□□ 2.33
LINC02558-201ENST00000416995 DNAJC5Q9H3Z4 198 aa29.61■■■□□ 2.33
LINC02558-201ENST00000416995 CUX2O14529 1486 aa29.59■■■□□ 2.33
LINC02558-201ENST00000416995 BAZ1BQ9UIG0 1483 aaKnown RBP29.57■■■□□ 2.32
LINC02558-201ENST00000416995 PEG3Q9GZU2 1588 aa29.56■■■□□ 2.32
LINC02558-201ENST00000416995 NESP48681 1621 aa29.52■■■□□ 2.32
LINC02558-201ENST00000416995 MROH2BQ7Z745 1585 aa29.5■■■□□ 2.31
LINC02558-201ENST00000416995 LAMC3Q9Y6N6 1575 aa29.27■■■□□ 2.28
LINC02558-201ENST00000416995 THOC2Q8NI27 1593 aaKnown RBP29.21■■■□□ 2.27
LINC02558-201ENST00000416995 WIZO95785 1651 aa29.13■■■□□ 2.25
LINC02558-201ENST00000416995 KIF21AQ7Z4S6 1674 aa29.12■■■□□ 2.25
LINC02558-201ENST00000416995 PDS5BQ9NTI5 1447 aa29.11■■■□□ 2.25
LINC02558-201ENST00000416995 CADPSQ9ULU8 1353 aa29.06■■■□□ 2.24
LINC02558-201ENST00000416995 RSF1Q96T23 1441 aaPredicted RBP28.88■■■□□ 2.21
LINC02558-201ENST00000416995 MRC2Q9UBG0 1479 aa28.87■■■□□ 2.21
LINC02558-201ENST00000416995 WDR62O43379 1518 aa28.8■■■□□ 2.2
LINC02558-201ENST00000416995 TOP2AP11388 1531 aaKnown RBP28.75■■■□□ 2.19
LINC02558-201ENST00000416995 CEP164Q9UPV0 1460 aa28.75■■■□□ 2.19
LINC02558-201ENST00000416995 CFTRP13569 1480 aa28.72■■■□□ 2.19
LINC02558-201ENST00000416995 FANCD2Q9BXW9 1451 aa28.72■■■□□ 2.19
LINC02558-201ENST00000416995 URB2Q14146 1524 aaKnown RBP28.51■■■□□ 2.15
LINC02558-201ENST00000416995 CCDC88BA6NC98 1476 aa28.45■■■□□ 2.14
LINC02558-201ENST00000416995 PRDM2Q13029 1718 aa28.41■■■□□ 2.14
LINC02558-201ENST00000416995 TRIM41Q8WV44 630 aa28.29■■■□□ 2.12
LINC02558-201ENST00000416995 OSCARQ8IYS5 282 aa28.24■■■□□ 2.11
LINC02558-201ENST00000416995 TOPBP1Q92547 1522 aa28.19■■■□□ 2.1
LINC02558-201ENST00000416995 IFT140Q96RY7 1462 aa28.18■■■□□ 2.1
LINC02558-201ENST00000416995 ZNF608Q9ULD9 1512 aaPredicted RBP28.16■■■□□ 2.1
LINC02558-201ENST00000416995 ABCC8Q09428 1581 aa28.1■■■□□ 2.09
LINC02558-201ENST00000416995 DNMBPQ6XZF7 1577 aa28.07■■■□□ 2.08
LINC02558-201ENST00000416995 EIF4G3O43432 1585 aaKnown RBP27.99■■■□□ 2.07
LINC02558-201ENST00000416995 TARBP1Q13395 1621 aaKnown RBP27.94■■■□□ 2.06
LINC02558-201ENST00000416995 AQRO60306 1485 aaKnown RBP eCLIP27.9■■■□□ 2.06
LINC02558-201ENST00000416995 POLA1P09884 1462 aaPredicted RBP27.9■■■□□ 2.06
LINC02558-201ENST00000416995 RIMBP3CA6NJZ7 1639 aa27.89■■■□□ 2.05
LINC02558-201ENST00000416995 RIMBP3BA6NNM3 1639 aa27.89■■■□□ 2.05
LINC02558-201ENST00000416995 RIMBP3Q9UFD9 1639 aa27.89■■■□□ 2.05
LINC02558-201ENST00000416995 RAD54L2Q9Y4B4 1467 aa27.81■■■□□ 2.04
LINC02558-201ENST00000416995 ARHGEF11O15085 1522 aa27.79■■■□□ 2.04
LINC02558-201ENST00000416995 SOGA1O94964 1423 aa27.77■■■□□ 2.04
LINC02558-201ENST00000416995 CHD1O14646 1710 aa27.77■■■□□ 2.04
LINC02558-201ENST00000416995 TDRD9Q8NDG6 1382 aaKnown RBP27.73■■■□□ 2.03
LINC02558-201ENST00000416995 FGD5Q6ZNL6 1462 aa27.72■■■□□ 2.03
LINC02558-201ENST00000416995 CUX1P39880 1505 aa27.71■■■□□ 2.03
LINC02558-201ENST00000416995 FBLN2P98095 1184 aa27.69■■■□□ 2.02
LINC02558-201ENST00000416995 WDR97A6NE52 1622 aa27.62■■■□□ 2.01
LINC02558-201ENST00000416995 SNAPC4Q5SXM2 1469 aa27.61■■■□□ 2.01
LINC02558-201ENST00000416995 CYB5RLQ6IPT4 315 aa27.6■■■□□ 2.01
LINC02558-201ENST00000416995 SUPT5HO00267 1087 aaKnown RBP27.58■■■□□ 2.01
LINC02558-201ENST00000416995 ARAP1Q96P48 1450 aa27.54■■■□□ 2
LINC02558-201ENST00000416995 GRIN2BQ13224 1484 aa27.52■■■□□ 2
LINC02558-201ENST00000416995 MAGI1Q96QZ7 1491 aaPredicted RBP27.52■■■□□ 2
LINC02558-201ENST00000416995 CHMP7Q8WUX9 453 aaPredicted RBP27.49■■□□□ 1.99
LINC02558-201ENST00000416995 CLASP1Q7Z460 1538 aa27.47■■□□□ 1.99
LINC02558-201ENST00000416995 SYNJ2O15056 1496 aa27.43■■□□□ 1.98
LINC02558-201ENST00000416995 GAPVD1Q14C86 1478 aa27.43■■□□□ 1.98
LINC02558-201ENST00000416995 SYNJ1O43426 1573 aa27.43■■□□□ 1.98
LINC02558-201ENST00000416995 ABCA10Q8WWZ4 1543 aa27.41■■□□□ 1.98
LINC02558-201ENST00000416995 PBRM1Q86U86 1689 aa27.4■■□□□ 1.98
LINC02558-201ENST00000416995 ABCA5Q8WWZ7 1642 aa27.38■■□□□ 1.97
LINC02558-201ENST00000416995 WRNQ14191 1432 aaPredicted RBP eCLIP27.29■■□□□ 1.96
LINC02558-201ENST00000416995 TRHP20396 242 aaPredicted RBP27.27■■□□□ 1.96
LINC02558-201ENST00000416995 TOP2BQ02880 1626 aa27.24■■□□□ 1.95
LINC02558-201ENST00000416995 BIVM-ERCC5R4GMW8 1640 aa27.24■■□□□ 1.95
LINC02558-201ENST00000416995 GRIN2AQ12879 1464 aa27.18■■□□□ 1.94
LINC02558-201ENST00000416995 ADAMTS12P58397 1594 aa27.16■■□□□ 1.94
LINC02558-201ENST00000416995 NUP160Q12769 1436 aa27.09■■□□□ 1.93
LINC02558-201ENST00000416995 CEP170Q5SW79 1584 aa27.09■■□□□ 1.93
LINC02558-201ENST00000416995 FHAD1B1AJZ9 1412 aa27.08■■□□□ 1.93
LINC02558-201ENST00000416995 ERCC6L2Q5T890 1561 aa27.06■■□□□ 1.92
LINC02558-201ENST00000416995 ERICH3Q5RHP9 1530 aa27.06■■□□□ 1.92
LINC02558-201ENST00000416995 SHROOM2Q13796 1616 aa26.97■■□□□ 1.91
LINC02558-201ENST00000416995 PRG4Q92954 1404 aaPredicted RBP26.82■■□□□ 1.88
LINC02558-201ENST00000416995 JPH4Q96JJ6 628 aa26.81■■□□□ 1.88
LINC02558-201ENST00000416995 RUSC2Q8N2Y8 1516 aa26.78■■□□□ 1.88
LINC02558-201ENST00000416995 IGF1RP08069 1367 aa26.73■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms