RNA–Protein interactions for RNA: ENST00000416953.2

POLE-202, Transcript of DNA polymerase epsilon, catalytic subunit, humanhuman

TSL 4

Gene POLE, Length 542 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLE-202ENST00000416953 NISCHQ9Y2I1 1504 aa27.35■■□□□ 1.97
POLE-202ENST00000416953 ABCC9O60706 1549 aa24.65■■□□□ 1.54
POLE-202ENST00000416953 CCDC180Q9P1Z9 1646 aa24.6■■□□□ 1.53
POLE-202ENST00000416953 RB1CC1Q8TDY2 1594 aa23.4■■□□□ 1.34
POLE-202ENST00000416953 NACADO15069 1562 aa23.2■■□□□ 1.3
POLE-202ENST00000416953 DCAF8L2P0C7V8 631 aa23.12■■□□□ 1.29
POLE-202ENST00000416953 DNAJC5BQ9UF47 199 aa23.09■■□□□ 1.29
POLE-202ENST00000416953 UNC13AQ9UPW8 1703 aa23■■□□□ 1.27
POLE-202ENST00000416953 PABPN1Q86U42 306 aaKnown RBP eCLIP22.92■■□□□ 1.26
POLE-202ENST00000416953 MYO15BQ96JP2 1530 aa22.82■■□□□ 1.24
POLE-202ENST00000416953 BICRAQ9NZM4 1560 aa22.76■■□□□ 1.23
POLE-202ENST00000416953 ZCCHC6Q5VYS8 1495 aaKnown RBP22.68■■□□□ 1.22
POLE-202ENST00000416953 DCAF1Q9Y4B6 1507 aa22.53■■□□□ 1.2
POLE-202ENST00000416953 SCRIBQ14160 1630 aa22.49■■□□□ 1.19
POLE-202ENST00000416953 SHROOM4Q9ULL8 1493 aa22.34■■□□□ 1.17
POLE-202ENST00000416953 CC2D2AQ9P2K1 1620 aa22.27■■□□□ 1.16
POLE-202ENST00000416953 EIF4G1Q04637 1599 aaKnown RBP22.19■■□□□ 1.14
POLE-202ENST00000416953 CECR2Q9BXF3 1484 aa22.16■■□□□ 1.14
POLE-202ENST00000416953 SMARCA4P51532 1647 aa21.4■■□□□ 1.02
POLE-202ENST00000416953 NCAPD3P42695 1498 aa21.39■■□□□ 1.01
POLE-202ENST00000416953 ATAD2BQ9ULI0 1458 aa21.36■■□□□ 1.01
POLE-202ENST00000416953 SMARCA2P51531 1590 aa21.31■■□□□ 1
POLE-202ENST00000416953 HMGXB3Q12766 1538 aa21.28■■□□□ 1
POLE-202ENST00000416953 ERCC6Q03468 1493 aa21.26■□□□□ 0.99
POLE-202ENST00000416953 BAZ1AQ9NRL2 1556 aaPredicted RBP21.23■□□□□ 0.99
POLE-202ENST00000416953 CUX2O14529 1486 aa21.18■□□□□ 0.98
POLE-202ENST00000416953 BAZ1BQ9UIG0 1483 aaKnown RBP21.18■□□□□ 0.98
POLE-202ENST00000416953 NESP48681 1621 aa21.18■□□□□ 0.98
POLE-202ENST00000416953 DNAJC5Q9H3Z4 198 aa21.16■□□□□ 0.98
POLE-202ENST00000416953 MROH2BQ7Z745 1585 aa21.12■□□□□ 0.97
POLE-202ENST00000416953 PEG3Q9GZU2 1588 aa21.12■□□□□ 0.97
POLE-202ENST00000416953 THOC2Q8NI27 1593 aaKnown RBP20.97■□□□□ 0.95
POLE-202ENST00000416953 LAMC3Q9Y6N6 1575 aa20.97■□□□□ 0.95
POLE-202ENST00000416953 KIF21AQ7Z4S6 1674 aa20.96■□□□□ 0.95
POLE-202ENST00000416953 WIZO95785 1651 aa20.91■□□□□ 0.94
POLE-202ENST00000416953 PDS5BQ9NTI5 1447 aa20.8■□□□□ 0.92
POLE-202ENST00000416953 CADPSQ9ULU8 1353 aa20.74■□□□□ 0.91
POLE-202ENST00000416953 MRC2Q9UBG0 1479 aa20.68■□□□□ 0.9
POLE-202ENST00000416953 WDR62O43379 1518 aa20.63■□□□□ 0.89
POLE-202ENST00000416953 RSF1Q96T23 1441 aaPredicted RBP20.62■□□□□ 0.89
POLE-202ENST00000416953 CEP164Q9UPV0 1460 aa20.6■□□□□ 0.89
POLE-202ENST00000416953 TOP2AP11388 1531 aaKnown RBP20.58■□□□□ 0.89
POLE-202ENST00000416953 FANCD2Q9BXW9 1451 aa20.56■□□□□ 0.88
POLE-202ENST00000416953 CFTRP13569 1480 aa20.52■□□□□ 0.88
POLE-202ENST00000416953 PRDM2Q13029 1718 aa20.44■□□□□ 0.86
POLE-202ENST00000416953 URB2Q14146 1524 aaKnown RBP20.43■□□□□ 0.86
POLE-202ENST00000416953 CCDC88BA6NC98 1476 aa20.34■□□□□ 0.85
POLE-202ENST00000416953 TRIM41Q8WV44 630 aa20.33■□□□□ 0.85
POLE-202ENST00000416953 ZNF608Q9ULD9 1512 aaPredicted RBP20.19■□□□□ 0.82
POLE-202ENST00000416953 TOPBP1Q92547 1522 aa20.18■□□□□ 0.82
POLE-202ENST00000416953 OSCARQ8IYS5 282 aa20.17■□□□□ 0.82
POLE-202ENST00000416953 IFT140Q96RY7 1462 aa20.15■□□□□ 0.82
POLE-202ENST00000416953 EIF4G3O43432 1585 aaKnown RBP20.11■□□□□ 0.81
POLE-202ENST00000416953 DNMBPQ6XZF7 1577 aa20.11■□□□□ 0.81
POLE-202ENST00000416953 ABCC8Q09428 1581 aa20.06■□□□□ 0.8
POLE-202ENST00000416953 RIMBP3CA6NJZ7 1639 aa20.04■□□□□ 0.8
POLE-202ENST00000416953 RIMBP3BA6NNM3 1639 aa20.04■□□□□ 0.8
POLE-202ENST00000416953 RIMBP3Q9UFD9 1639 aa20.04■□□□□ 0.8
POLE-202ENST00000416953 TARBP1Q13395 1621 aaKnown RBP20.02■□□□□ 0.8
POLE-202ENST00000416953 CHD1O14646 1710 aa20■□□□□ 0.79
POLE-202ENST00000416953 AQRO60306 1485 aaKnown RBP eCLIP19.98■□□□□ 0.797e-7■■■■■ 33.1
POLE-202ENST00000416953 POLA1P09884 1462 aaPredicted RBP19.97■□□□□ 0.79
POLE-202ENST00000416953 ARHGEF11O15085 1522 aa19.93■□□□□ 0.78
POLE-202ENST00000416953 RAD54L2Q9Y4B4 1467 aa19.92■□□□□ 0.78
POLE-202ENST00000416953 FGD5Q6ZNL6 1462 aa19.86■□□□□ 0.77
POLE-202ENST00000416953 FBLN2P98095 1184 aa19.85■□□□□ 0.77
POLE-202ENST00000416953 CUX1P39880 1505 aa19.85■□□□□ 0.77
POLE-202ENST00000416953 SOGA1O94964 1423 aa19.85■□□□□ 0.77
POLE-202ENST00000416953 TDRD9Q8NDG6 1382 aaKnown RBP19.83■□□□□ 0.77
POLE-202ENST00000416953 SNAPC4Q5SXM2 1469 aa19.79■□□□□ 0.76
POLE-202ENST00000416953 WDR97A6NE52 1622 aa19.77■□□□□ 0.76
POLE-202ENST00000416953 CYB5RLQ6IPT4 315 aa19.75■□□□□ 0.75
POLE-202ENST00000416953 ARAP1Q96P48 1450 aa19.74■□□□□ 0.75
POLE-202ENST00000416953 SUPT5HO00267 1087 aaKnown RBP19.73■□□□□ 0.75
POLE-202ENST00000416953 PBRM1Q86U86 1689 aa19.72■□□□□ 0.75
POLE-202ENST00000416953 MAGI1Q96QZ7 1491 aaPredicted RBP19.69■□□□□ 0.74
POLE-202ENST00000416953 GRIN2BQ13224 1484 aa19.68■□□□□ 0.74
POLE-202ENST00000416953 CLASP1Q7Z460 1538 aa19.68■□□□□ 0.74
POLE-202ENST00000416953 SYNJ1O43426 1573 aa19.66■□□□□ 0.74
POLE-202ENST00000416953 CHMP7Q8WUX9 453 aaPredicted RBP19.65■□□□□ 0.74
POLE-202ENST00000416953 ABCA5Q8WWZ7 1642 aa19.62■□□□□ 0.73
POLE-202ENST00000416953 SYNJ2O15056 1496 aa19.62■□□□□ 0.73
POLE-202ENST00000416953 GAPVD1Q14C86 1478 aa19.62■□□□□ 0.73
POLE-202ENST00000416953 ABCA10Q8WWZ4 1543 aa19.59■□□□□ 0.73
POLE-202ENST00000416953 TRHP20396 242 aaPredicted RBP19.56■□□□□ 0.72
POLE-202ENST00000416953 BIVM-ERCC5R4GMW8 1640 aa19.54■□□□□ 0.72
POLE-202ENST00000416953 TOP2BQ02880 1626 aa19.51■□□□□ 0.71
POLE-202ENST00000416953 WRNQ14191 1432 aaPredicted RBP eCLIP19.49■□□□□ 0.71
POLE-202ENST00000416953 ADAMTS12P58397 1594 aa19.49■□□□□ 0.71
POLE-202ENST00000416953 GRIN2AQ12879 1464 aa19.46■□□□□ 0.71
POLE-202ENST00000416953 CEP170Q5SW79 1584 aa19.44■□□□□ 0.7
POLE-202ENST00000416953 ERCC6L2Q5T890 1561 aa19.43■□□□□ 0.7
POLE-202ENST00000416953 NUP160Q12769 1436 aa19.36■□□□□ 0.69
POLE-202ENST00000416953 FHAD1B1AJZ9 1412 aa19.35■□□□□ 0.69
POLE-202ENST00000416953 ERICH3Q5RHP9 1530 aa19.35■□□□□ 0.69
POLE-202ENST00000416953 SHROOM2Q13796 1616 aa19.33■□□□□ 0.68
POLE-202ENST00000416953 RUSC2Q8N2Y8 1516 aa19.22■□□□□ 0.67
POLE-202ENST00000416953 PRG4Q92954 1404 aaPredicted RBP19.19■□□□□ 0.66
POLE-202ENST00000416953 KIF13AQ9H1H9 1805 aa19.14■□□□□ 0.65
POLE-202ENST00000416953 JPH4Q96JJ6 628 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms