RNA–Protein interactions for RNA: ENST00000416880.5

SEC22C-204, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 4

Gene SEC22C, Length 527 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-204ENST00000416880 NISCHQ9Y2I1 1504 aa33.87■■■■□ 3.01
SEC22C-204ENST00000416880 CCDC180Q9P1Z9 1646 aa30.3■■■□□ 2.44
SEC22C-204ENST00000416880 ABCC9O60706 1549 aa30.02■■■□□ 2.4
SEC22C-204ENST00000416880 RB1CC1Q8TDY2 1594 aa28.75■■■□□ 2.19
SEC22C-204ENST00000416880 NACADO15069 1562 aa28.63■■■□□ 2.17
SEC22C-204ENST00000416880 DCAF8L2P0C7V8 631 aa28.49■■■□□ 2.15
SEC22C-204ENST00000416880 MYO15BQ96JP2 1530 aa28.37■■■□□ 2.13
SEC22C-204ENST00000416880 ZCCHC6Q5VYS8 1495 aaKnown RBP28.08■■■□□ 2.09
SEC22C-204ENST00000416880 DCAF1Q9Y4B6 1507 aa28.06■■■□□ 2.08
SEC22C-204ENST00000416880 PABPN1Q86U42 306 aaKnown RBP eCLIP28.01■■■□□ 2.07
SEC22C-204ENST00000416880 DNAJC5BQ9UF47 199 aa28■■■□□ 2.07
SEC22C-204ENST00000416880 UNC13AQ9UPW8 1703 aa28■■■□□ 2.07
SEC22C-204ENST00000416880 BICRAQ9NZM4 1560 aa27.84■■■□□ 2.05
SEC22C-204ENST00000416880 SHROOM4Q9ULL8 1493 aa27.63■■■□□ 2.01
SEC22C-204ENST00000416880 SCRIBQ14160 1630 aa27.52■■■□□ 2
SEC22C-204ENST00000416880 EIF4G1Q04637 1599 aaKnown RBP27.16■■□□□ 1.94
SEC22C-204ENST00000416880 CC2D2AQ9P2K1 1620 aa27.15■■□□□ 1.94
SEC22C-204ENST00000416880 CECR2Q9BXF3 1484 aa27.07■■□□□ 1.92
SEC22C-204ENST00000416880 NCAPD3P42695 1498 aa26.44■■□□□ 1.82
SEC22C-204ENST00000416880 ATAD2BQ9ULI0 1458 aa26.35■■□□□ 1.81
SEC22C-204ENST00000416880 SMARCA4P51532 1647 aa26.34■■□□□ 1.81
SEC22C-204ENST00000416880 SMARCA2P51531 1590 aa26.31■■□□□ 1.8
SEC22C-204ENST00000416880 BAZ1AQ9NRL2 1556 aaPredicted RBP26.29■■□□□ 1.8
SEC22C-204ENST00000416880 HMGXB3Q12766 1538 aa26.23■■□□□ 1.79
SEC22C-204ENST00000416880 PEG3Q9GZU2 1588 aa26.14■■□□□ 1.78
SEC22C-204ENST00000416880 BAZ1BQ9UIG0 1483 aaKnown RBP26.1■■□□□ 1.77
SEC22C-204ENST00000416880 MROH2BQ7Z745 1585 aa26.05■■□□□ 1.76
SEC22C-204ENST00000416880 ERCC6Q03468 1493 aa25.95■■□□□ 1.74
SEC22C-204ENST00000416880 CUX2O14529 1486 aa25.89■■□□□ 1.73
SEC22C-204ENST00000416880 NESP48681 1621 aa25.83■■□□□ 1.73
SEC22C-204ENST00000416880 LAMC3Q9Y6N6 1575 aa25.79■■□□□ 1.72
SEC22C-204ENST00000416880 WIZO95785 1651 aa25.72■■□□□ 1.71
SEC22C-204ENST00000416880 PDS5BQ9NTI5 1447 aa25.67■■□□□ 1.7
SEC22C-204ENST00000416880 DNAJC5Q9H3Z4 198 aa25.65■■□□□ 1.7
SEC22C-204ENST00000416880 CADPSQ9ULU8 1353 aa25.65■■□□□ 1.7
SEC22C-204ENST00000416880 RSF1Q96T23 1441 aaPredicted RBP25.63■■□□□ 1.69
SEC22C-204ENST00000416880 THOC2Q8NI27 1593 aaKnown RBP25.54■■□□□ 1.68
SEC22C-204ENST00000416880 KIF21AQ7Z4S6 1674 aa25.5■■□□□ 1.67
SEC22C-204ENST00000416880 TOP2AP11388 1531 aaKnown RBP25.47■■□□□ 1.67
SEC22C-204ENST00000416880 CFTRP13569 1480 aa25.38■■□□□ 1.65
SEC22C-204ENST00000416880 MRC2Q9UBG0 1479 aa25.37■■□□□ 1.65
SEC22C-204ENST00000416880 CEP164Q9UPV0 1460 aa25.31■■□□□ 1.64
SEC22C-204ENST00000416880 FANCD2Q9BXW9 1451 aa25.3■■□□□ 1.64
SEC22C-204ENST00000416880 WDR62O43379 1518 aa25.29■■□□□ 1.64
SEC22C-204ENST00000416880 CCDC88BA6NC98 1476 aa25.18■■□□□ 1.62
SEC22C-204ENST00000416880 PRDM2Q13029 1718 aa25.09■■□□□ 1.61
SEC22C-204ENST00000416880 URB2Q14146 1524 aaKnown RBP25.05■■□□□ 1.6
SEC22C-204ENST00000416880 ABCC8Q09428 1581 aa24.92■■□□□ 1.58
SEC22C-204ENST00000416880 TOPBP1Q92547 1522 aa24.84■■□□□ 1.57
SEC22C-204ENST00000416880 IFT140Q96RY7 1462 aa24.83■■□□□ 1.57
SEC22C-204ENST00000416880 OSCARQ8IYS5 282 aa24.79■■□□□ 1.56
SEC22C-204ENST00000416880 DNMBPQ6XZF7 1577 aa24.77■■□□□ 1.56
SEC22C-204ENST00000416880 ZNF608Q9ULD9 1512 aaPredicted RBP24.69■■□□□ 1.54
SEC22C-204ENST00000416880 SUPT5HO00267 1087 aaKnown RBP24.63■■□□□ 1.53
SEC22C-204ENST00000416880 POLA1P09884 1462 aaPredicted RBP24.59■■□□□ 1.53
SEC22C-204ENST00000416880 TARBP1Q13395 1621 aaKnown RBP24.59■■□□□ 1.53
SEC22C-204ENST00000416880 EIF4G3O43432 1585 aaKnown RBP24.55■■□□□ 1.52
SEC22C-204ENST00000416880 SOGA1O94964 1423 aa24.54■■□□□ 1.52
SEC22C-204ENST00000416880 AQRO60306 1485 aaKnown RBP eCLIP24.52■■□□□ 1.52
SEC22C-204ENST00000416880 TRIM41Q8WV44 630 aa24.52■■□□□ 1.52
SEC22C-204ENST00000416880 RAD54L2Q9Y4B4 1467 aa24.47■■□□□ 1.51
SEC22C-204ENST00000416880 FGD5Q6ZNL6 1462 aa24.46■■□□□ 1.51
SEC22C-204ENST00000416880 CUX1P39880 1505 aa24.45■■□□□ 1.51
SEC22C-204ENST00000416880 WDR97A6NE52 1622 aa24.45■■□□□ 1.5
SEC22C-204ENST00000416880 TDRD9Q8NDG6 1382 aaKnown RBP24.42■■□□□ 1.5
SEC22C-204ENST00000416880 FBLN2P98095 1184 aa24.35■■□□□ 1.49
SEC22C-204ENST00000416880 CHD1O14646 1710 aa24.32■■□□□ 1.48
SEC22C-204ENST00000416880 RIMBP3CA6NJZ7 1639 aa24.31■■□□□ 1.48
SEC22C-204ENST00000416880 RIMBP3BA6NNM3 1639 aa24.31■■□□□ 1.48
SEC22C-204ENST00000416880 RIMBP3Q9UFD9 1639 aa24.31■■□□□ 1.48
SEC22C-204ENST00000416880 GRIN2BQ13224 1484 aa24.3■■□□□ 1.48
SEC22C-204ENST00000416880 MAGI1Q96QZ7 1491 aaPredicted RBP24.28■■□□□ 1.48
SEC22C-204ENST00000416880 ARHGEF11O15085 1522 aa24.27■■□□□ 1.48
SEC22C-204ENST00000416880 SNAPC4Q5SXM2 1469 aa24.26■■□□□ 1.47
SEC22C-204ENST00000416880 CHMP7Q8WUX9 453 aaPredicted RBP24.26■■□□□ 1.47
SEC22C-204ENST00000416880 ABCA10Q8WWZ4 1543 aa24.25■■□□□ 1.47
SEC22C-204ENST00000416880 GAPVD1Q14C86 1478 aa24.23■■□□□ 1.47
SEC22C-204ENST00000416880 WRNQ14191 1432 aaPredicted RBP eCLIP24.22■■□□□ 1.47
SEC22C-204ENST00000416880 SYNJ2O15056 1496 aa24.19■■□□□ 1.46
SEC22C-204ENST00000416880 TOP2BQ02880 1626 aa24.17■■□□□ 1.46
SEC22C-204ENST00000416880 BIVM-ERCC5R4GMW8 1640 aa24.15■■□□□ 1.46
SEC22C-204ENST00000416880 SYNJ1O43426 1573 aa24.14■■□□□ 1.45
SEC22C-204ENST00000416880 ABCA5Q8WWZ7 1642 aa24.13■■□□□ 1.45
SEC22C-204ENST00000416880 CYB5RLQ6IPT4 315 aa24.13■■□□□ 1.45
SEC22C-204ENST00000416880 PBRM1Q86U86 1689 aa24.12■■□□□ 1.45
SEC22C-204ENST00000416880 CLASP1Q7Z460 1538 aa24.1■■□□□ 1.45
SEC22C-204ENST00000416880 ARAP1Q96P48 1450 aa24.03■■□□□ 1.44
SEC22C-204ENST00000416880 ERICH3Q5RHP9 1530 aa23.95■■□□□ 1.43
SEC22C-204ENST00000416880 GRIN2AQ12879 1464 aa23.95■■□□□ 1.42
SEC22C-204ENST00000416880 FHAD1B1AJZ9 1412 aa23.95■■□□□ 1.42
SEC22C-204ENST00000416880 ADAMTS12P58397 1594 aa23.92■■□□□ 1.42
SEC22C-204ENST00000416880 NUP160Q12769 1436 aa23.88■■□□□ 1.41
SEC22C-204ENST00000416880 CEP170Q5SW79 1584 aa23.81■■□□□ 1.4
SEC22C-204ENST00000416880 TRHP20396 242 aaPredicted RBP23.8■■□□□ 1.4
SEC22C-204ENST00000416880 KIF27Q86VH2 1401 aa23.75■■□□□ 1.39
SEC22C-204ENST00000416880 SHROOM2Q13796 1616 aa23.73■■□□□ 1.39
SEC22C-204ENST00000416880 IGF1RP08069 1367 aa23.71■■□□□ 1.39
SEC22C-204ENST00000416880 JPH4Q96JJ6 628 aa23.69■■□□□ 1.38
SEC22C-204ENST00000416880 ERCC6L2Q5T890 1561 aa23.66■■□□□ 1.38
SEC22C-204ENST00000416880 PRG4Q92954 1404 aaPredicted RBP23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms