RNA–Protein interactions for RNA: ENST00000416824.1

LINC00957-201, long intergenic non-protein coding RNA 957, humanhuman

TSL 2

Gene LINC00957, Length 1,323 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00957-201ENST00000416824 NISCHQ9Y2I1 1504 aa52.91■■■■■ 6.06
LINC00957-201ENST00000416824 CCDC180Q9P1Z9 1646 aa47.14■■■■■ 5.14
LINC00957-201ENST00000416824 ABCC9O60706 1549 aa46.71■■■■■ 5.07
LINC00957-201ENST00000416824 RB1CC1Q8TDY2 1594 aa44.62■■■■■ 4.73
LINC00957-201ENST00000416824 NACADO15069 1562 aa44.46■■■■■ 4.71
LINC00957-201ENST00000416824 DCAF8L2P0C7V8 631 aa44.44■■■■■ 4.7
LINC00957-201ENST00000416824 MYO15BQ96JP2 1530 aa44.02■■■■■ 4.64
LINC00957-201ENST00000416824 ZCCHC6Q5VYS8 1495 aaKnown RBP43.98■■■■■ 4.63
LINC00957-201ENST00000416824 DCAF1Q9Y4B6 1507 aa43.69■■■■■ 4.58
LINC00957-201ENST00000416824 PABPN1Q86U42 306 aaKnown RBP eCLIP43.62■■■■■ 4.57
LINC00957-201ENST00000416824 UNC13AQ9UPW8 1703 aa43.61■■■■■ 4.57
LINC00957-201ENST00000416824 BICRAQ9NZM4 1560 aa43.37■■■■■ 4.53
LINC00957-201ENST00000416824 DNAJC5BQ9UF47 199 aa43.36■■■■■ 4.53
LINC00957-201ENST00000416824 SCRIBQ14160 1630 aa43.1■■■■■ 4.49
LINC00957-201ENST00000416824 SHROOM4Q9ULL8 1493 aa42.75■■■■■ 4.43
LINC00957-201ENST00000416824 EIF4G1Q04637 1599 aaKnown RBP42.24■■■■■ 4.35
LINC00957-201ENST00000416824 CC2D2AQ9P2K1 1620 aa42.18■■■■■ 4.34
LINC00957-201ENST00000416824 CECR2Q9BXF3 1484 aa41.99■■■■■ 4.31
LINC00957-201ENST00000416824 SMARCA4P51532 1647 aa41.13■■■■■ 4.18
LINC00957-201ENST00000416824 NCAPD3P42695 1498 aa41.07■■■■■ 4.17
LINC00957-201ENST00000416824 ATAD2BQ9ULI0 1458 aa41.06■■■■■ 4.16
LINC00957-201ENST00000416824 BAZ1AQ9NRL2 1556 aaPredicted RBP40.99■■■■■ 4.15
LINC00957-201ENST00000416824 SMARCA2P51531 1590 aa40.92■■■■■ 4.14
LINC00957-201ENST00000416824 MROH2BQ7Z745 1585 aa40.81■■■■■ 4.12
LINC00957-201ENST00000416824 HMGXB3Q12766 1538 aa40.8■■■■■ 4.12
LINC00957-201ENST00000416824 PEG3Q9GZU2 1588 aa40.71■■■■■ 4.11
LINC00957-201ENST00000416824 BAZ1BQ9UIG0 1483 aaKnown RBP40.67■■■■■ 4.1
LINC00957-201ENST00000416824 WIZO95785 1651 aa40.32■■■■■ 4.04
LINC00957-201ENST00000416824 NESP48681 1621 aa40.31■■■■■ 4.04
LINC00957-201ENST00000416824 ERCC6Q03468 1493 aa40.24■■■■■ 4.03
LINC00957-201ENST00000416824 RSF1Q96T23 1441 aaPredicted RBP40.17■■■■■ 4.02
LINC00957-201ENST00000416824 LAMC3Q9Y6N6 1575 aa40.02■■■■■ 4
LINC00957-201ENST00000416824 CUX2O14529 1486 aa39.95■■■■□ 3.99
LINC00957-201ENST00000416824 CADPSQ9ULU8 1353 aa39.87■■■■□ 3.97
LINC00957-201ENST00000416824 TOP2AP11388 1531 aaKnown RBP39.84■■■■□ 3.97
LINC00957-201ENST00000416824 PDS5BQ9NTI5 1447 aa39.79■■■■□ 3.96
LINC00957-201ENST00000416824 KIF21AQ7Z4S6 1674 aa39.74■■■■□ 3.95
LINC00957-201ENST00000416824 THOC2Q8NI27 1593 aaKnown RBP39.74■■■■□ 3.95
LINC00957-201ENST00000416824 CFTRP13569 1480 aa39.53■■■■□ 3.92
LINC00957-201ENST00000416824 MRC2Q9UBG0 1479 aa39.44■■■■□ 3.9
LINC00957-201ENST00000416824 CCDC88BA6NC98 1476 aa39.42■■■■□ 3.9
LINC00957-201ENST00000416824 FANCD2Q9BXW9 1451 aa39.42■■■■□ 3.9
LINC00957-201ENST00000416824 CEP164Q9UPV0 1460 aa39.39■■■■□ 3.9
LINC00957-201ENST00000416824 WDR62O43379 1518 aa39.32■■■■□ 3.88
LINC00957-201ENST00000416824 DNAJC5Q9H3Z4 198 aa39.31■■■■□ 3.88
LINC00957-201ENST00000416824 URB2Q14146 1524 aaKnown RBP39.08■■■■□ 3.85
LINC00957-201ENST00000416824 PRDM2Q13029 1718 aa39.08■■■■□ 3.85
LINC00957-201ENST00000416824 SUPT5HO00267 1087 aaKnown RBP38.85■■■■□ 3.81
LINC00957-201ENST00000416824 TOPBP1Q92547 1522 aa38.74■■■■□ 3.79
LINC00957-201ENST00000416824 DNMBPQ6XZF7 1577 aa38.62■■■■□ 3.77
LINC00957-201ENST00000416824 ABCC8Q09428 1581 aa38.61■■■■□ 3.77
LINC00957-201ENST00000416824 IFT140Q96RY7 1462 aa38.58■■■■□ 3.77
LINC00957-201ENST00000416824 ZNF608Q9ULD9 1512 aaPredicted RBP38.52■■■■□ 3.76
LINC00957-201ENST00000416824 POLA1P09884 1462 aaPredicted RBP38.4■■■■□ 3.74
LINC00957-201ENST00000416824 TARBP1Q13395 1621 aaKnown RBP38.34■■■■□ 3.73
LINC00957-201ENST00000416824 CUX1P39880 1505 aa38.31■■■■□ 3.72
LINC00957-201ENST00000416824 EIF4G3O43432 1585 aaKnown RBP38.29■■■■□ 3.72
LINC00957-201ENST00000416824 RAD54L2Q9Y4B4 1467 aa38.27■■■■□ 3.72
LINC00957-201ENST00000416824 AQRO60306 1485 aaKnown RBP eCLIP38.24■■■■□ 3.71
LINC00957-201ENST00000416824 OSCARQ8IYS5 282 aa38.23■■■■□ 3.71
LINC00957-201ENST00000416824 FGD5Q6ZNL6 1462 aa38.23■■■■□ 3.71
LINC00957-201ENST00000416824 SOGA1O94964 1423 aa38.21■■■■□ 3.71
LINC00957-201ENST00000416824 TDRD9Q8NDG6 1382 aaKnown RBP38.09■■■■□ 3.69
LINC00957-201ENST00000416824 WDR97A6NE52 1622 aa37.92■■■■□ 3.66
LINC00957-201ENST00000416824 TRIM41Q8WV44 630 aa37.87■■■■□ 3.65
LINC00957-201ENST00000416824 SNAPC4Q5SXM2 1469 aa37.86■■■■□ 3.65
LINC00957-201ENST00000416824 CHD1O14646 1710 aa37.86■■■■□ 3.65
LINC00957-201ENST00000416824 WRNQ14191 1432 aaPredicted RBP eCLIP37.86■■■■□ 3.65
LINC00957-201ENST00000416824 FBLN2P98095 1184 aa37.86■■■■□ 3.65
LINC00957-201ENST00000416824 SYNJ1O43426 1573 aa37.82■■■■□ 3.64
LINC00957-201ENST00000416824 ABCA10Q8WWZ4 1543 aa37.81■■■■□ 3.64
LINC00957-201ENST00000416824 GRIN2BQ13224 1484 aa37.8■■■■□ 3.64
LINC00957-201ENST00000416824 TOP2BQ02880 1626 aa37.8■■■■□ 3.64
LINC00957-201ENST00000416824 BIVM-ERCC5R4GMW8 1640 aa37.78■■■■□ 3.64
LINC00957-201ENST00000416824 GAPVD1Q14C86 1478 aa37.75■■■■□ 3.63
LINC00957-201ENST00000416824 MAGI1Q96QZ7 1491 aaPredicted RBP37.73■■■■□ 3.63
LINC00957-201ENST00000416824 ABCA5Q8WWZ7 1642 aa37.7■■■■□ 3.63
LINC00957-201ENST00000416824 RIMBP3CA6NJZ7 1639 aa37.69■■■■□ 3.62
LINC00957-201ENST00000416824 RIMBP3BA6NNM3 1639 aa37.69■■■■□ 3.62
LINC00957-201ENST00000416824 RIMBP3Q9UFD9 1639 aa37.69■■■■□ 3.62
LINC00957-201ENST00000416824 PBRM1Q86U86 1689 aa37.66■■■■□ 3.62
LINC00957-201ENST00000416824 CHMP7Q8WUX9 453 aaPredicted RBP37.64■■■■□ 3.62
LINC00957-201ENST00000416824 ARHGEF11O15085 1522 aa37.64■■■■□ 3.62
LINC00957-201ENST00000416824 SYNJ2O15056 1496 aa37.61■■■■□ 3.61
LINC00957-201ENST00000416824 CLASP1Q7Z460 1538 aa37.49■■■■□ 3.59
LINC00957-201ENST00000416824 ADAMTS12P58397 1594 aa37.39■■■■□ 3.58
LINC00957-201ENST00000416824 ARAP1Q96P48 1450 aa37.35■■■■□ 3.57
LINC00957-201ENST00000416824 CYB5RLQ6IPT4 315 aa37.35■■■■□ 3.57
LINC00957-201ENST00000416824 GRIN2AQ12879 1464 aa37.33■■■■□ 3.57
LINC00957-201ENST00000416824 ERICH3Q5RHP9 1530 aa37.32■■■■□ 3.57
LINC00957-201ENST00000416824 FHAD1B1AJZ9 1412 aa37.29■■■■□ 3.56
LINC00957-201ENST00000416824 CEP170Q5SW79 1584 aa37.19■■■■□ 3.54
LINC00957-201ENST00000416824 NUP160Q12769 1436 aa37.19■■■■□ 3.54
LINC00957-201ENST00000416824 KIF27Q86VH2 1401 aa37.08■■■■□ 3.53
LINC00957-201ENST00000416824 IGF1RP08069 1367 aa37.04■■■■□ 3.52
LINC00957-201ENST00000416824 ERCC6L2Q5T890 1561 aa37■■■■□ 3.51
LINC00957-201ENST00000416824 SHROOM2Q13796 1616 aa36.92■■■■□ 3.5
LINC00957-201ENST00000416824 CUL7Q14999 1698 aa36.87■■■■□ 3.49
LINC00957-201ENST00000416824 RUSC2Q8N2Y8 1516 aa36.85■■■■□ 3.49
LINC00957-201ENST00000416824 JPH4Q96JJ6 628 aa36.81■■■■□ 3.48
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms