RNA–Protein interactions for RNA: ENST00000416746.1

CADM3-203, Transcript of cell adhesion molecule 3, humanhuman

TSL 1 (best)

Gene CADM3, Length 711 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CADM3-203ENST00000416746 NISCHQ9Y2I1 1504 aa30.87■■■□□ 2.53
CADM3-203ENST00000416746 ABCC9O60706 1549 aa28.58■■■□□ 2.17
CADM3-203ENST00000416746 CCDC180Q9P1Z9 1646 aa27.94■■■□□ 2.06
CADM3-203ENST00000416746 DNAJC5BQ9UF47 199 aa27.27■■□□□ 1.96
CADM3-203ENST00000416746 RB1CC1Q8TDY2 1594 aa26.92■■□□□ 1.9
CADM3-203ENST00000416746 NACADO15069 1562 aa26.56■■□□□ 1.84
CADM3-203ENST00000416746 PABPN1Q86U42 306 aaKnown RBP eCLIP26.51■■□□□ 1.83
CADM3-203ENST00000416746 DCAF8L2P0C7V8 631 aa26.41■■□□□ 1.82
CADM3-203ENST00000416746 UNC13AQ9UPW8 1703 aa26.26■■□□□ 1.79
CADM3-203ENST00000416746 BICRAQ9NZM4 1560 aa26.12■■□□□ 1.77
CADM3-203ENST00000416746 MYO15BQ96JP2 1530 aa25.97■■□□□ 1.75
CADM3-203ENST00000416746 CECR2Q9BXF3 1484 aa25.79■■□□□ 1.72
CADM3-203ENST00000416746 CC2D2AQ9P2K1 1620 aa25.75■■□□□ 1.71
CADM3-203ENST00000416746 SHROOM4Q9ULL8 1493 aa25.72■■□□□ 1.71
CADM3-203ENST00000416746 EIF4G1Q04637 1599 aaKnown RBP25.55■■□□□ 1.68
CADM3-203ENST00000416746 SCRIBQ14160 1630 aa25.49■■□□□ 1.67
CADM3-203ENST00000416746 DNAJC5Q9H3Z4 198 aa25.48■■□□□ 1.67
CADM3-203ENST00000416746 ZCCHC6Q5VYS8 1495 aaKnown RBP25.46■■□□□ 1.67
CADM3-203ENST00000416746 DCAF1Q9Y4B6 1507 aa25.42■■□□□ 1.66
CADM3-203ENST00000416746 CUX2O14529 1486 aa24.84■■□□□ 1.57
CADM3-203ENST00000416746 ERCC6Q03468 1493 aa24.75■■□□□ 1.55
CADM3-203ENST00000416746 NCAPD3P42695 1498 aa24.51■■□□□ 1.51
CADM3-203ENST00000416746 ATAD2BQ9ULI0 1458 aa24.38■■□□□ 1.49
CADM3-203ENST00000416746 NESP48681 1621 aa24.36■■□□□ 1.49
CADM3-203ENST00000416746 HMGXB3Q12766 1538 aa24.3■■□□□ 1.48
CADM3-203ENST00000416746 SMARCA2P51531 1590 aa24.3■■□□□ 1.48
CADM3-203ENST00000416746 THOC2Q8NI27 1593 aaKnown RBP24.22■■□□□ 1.47
CADM3-203ENST00000416746 SMARCA4P51532 1647 aa24.21■■□□□ 1.47
CADM3-203ENST00000416746 TRIM41Q8WV44 630 aa24.21■■□□□ 1.47
CADM3-203ENST00000416746 BAZ1BQ9UIG0 1483 aaKnown RBP24.15■■□□□ 1.46
CADM3-203ENST00000416746 LAMC3Q9Y6N6 1575 aa24.08■■□□□ 1.45
CADM3-203ENST00000416746 KIF21AQ7Z4S6 1674 aa24.02■■□□□ 1.44
CADM3-203ENST00000416746 BAZ1AQ9NRL2 1556 aaPredicted RBP24.01■■□□□ 1.43
CADM3-203ENST00000416746 PDS5BQ9NTI5 1447 aa23.99■■□□□ 1.43
CADM3-203ENST00000416746 PEG3Q9GZU2 1588 aa23.94■■□□□ 1.42
CADM3-203ENST00000416746 MRC2Q9UBG0 1479 aa23.81■■□□□ 1.4
CADM3-203ENST00000416746 MROH2BQ7Z745 1585 aa23.78■■□□□ 1.4
CADM3-203ENST00000416746 CADPSQ9ULU8 1353 aa23.77■■□□□ 1.4
CADM3-203ENST00000416746 WDR62O43379 1518 aa23.75■■□□□ 1.39
CADM3-203ENST00000416746 OSCARQ8IYS5 282 aa23.62■■□□□ 1.37
CADM3-203ENST00000416746 CEP164Q9UPV0 1460 aa23.62■■□□□ 1.37
CADM3-203ENST00000416746 FANCD2Q9BXW9 1451 aa23.53■■□□□ 1.36
CADM3-203ENST00000416746 WIZO95785 1651 aa23.48■■□□□ 1.35
CADM3-203ENST00000416746 RIMBP3CA6NJZ7 1639 aa23.38■■□□□ 1.33
CADM3-203ENST00000416746 RIMBP3BA6NNM3 1639 aa23.38■■□□□ 1.33
CADM3-203ENST00000416746 RIMBP3Q9UFD9 1639 aa23.38■■□□□ 1.33
CADM3-203ENST00000416746 CFTRP13569 1480 aa23.36■■□□□ 1.33
CADM3-203ENST00000416746 URB2Q14146 1524 aaKnown RBP23.35■■□□□ 1.33
CADM3-203ENST00000416746 ARHGEF11O15085 1522 aa23.24■■□□□ 1.31
CADM3-203ENST00000416746 ZNF608Q9ULD9 1512 aaPredicted RBP23.18■■□□□ 1.3
CADM3-203ENST00000416746 IFT140Q96RY7 1462 aa23.15■■□□□ 1.3
CADM3-203ENST00000416746 TOP2AP11388 1531 aaKnown RBP23.14■■□□□ 1.3
CADM3-203ENST00000416746 CYB5RLQ6IPT4 315 aa23.13■■□□□ 1.29
CADM3-203ENST00000416746 TRHP20396 242 aaPredicted RBP23.11■■□□□ 1.29
CADM3-203ENST00000416746 PRDM2Q13029 1718 aa23.08■■□□□ 1.28
CADM3-203ENST00000416746 RSF1Q96T23 1441 aaPredicted RBP23.08■■□□□ 1.28
CADM3-203ENST00000416746 EIF4G3O43432 1585 aaKnown RBP23.02■■□□□ 1.28
CADM3-203ENST00000416746 TOPBP1Q92547 1522 aa23.01■■□□□ 1.27
CADM3-203ENST00000416746 ARAP1Q96P48 1450 aa22.98■■□□□ 1.27
CADM3-203ENST00000416746 CHD1O14646 1710 aa22.95■■□□□ 1.26
CADM3-203ENST00000416746 FBLN2P98095 1184 aa22.92■■□□□ 1.26
CADM3-203ENST00000416746 ABCC8Q09428 1581 aa22.9■■□□□ 1.26
CADM3-203ENST00000416746 AQRO60306 1485 aaKnown RBP eCLIP22.89■■□□□ 1.25
CADM3-203ENST00000416746 CCDC88BA6NC98 1476 aa22.88■■□□□ 1.25
CADM3-203ENST00000416746 AEBP2Q6ZN18 517 aaPredicted RBP22.88■■□□□ 1.25
CADM3-203ENST00000416746 DNMBPQ6XZF7 1577 aa22.87■■□□□ 1.25
CADM3-203ENST00000416746 TARBP1Q13395 1621 aaKnown RBP22.82■■□□□ 1.24
CADM3-203ENST00000416746 POLA1P09884 1462 aaPredicted RBP22.73■■□□□ 1.23
CADM3-203ENST00000416746 RAD54L2Q9Y4B4 1467 aa22.67■■□□□ 1.22
CADM3-203ENST00000416746 TDRD9Q8NDG6 1382 aaKnown RBP22.66■■□□□ 1.22
CADM3-203ENST00000416746 CLASP1Q7Z460 1538 aa22.66■■□□□ 1.22
CADM3-203ENST00000416746 SNAPC4Q5SXM2 1469 aa22.66■■□□□ 1.22
CADM3-203ENST00000416746 SYNJ1O43426 1573 aa22.63■■□□□ 1.21
CADM3-203ENST00000416746 CHMP7Q8WUX9 453 aaPredicted RBP22.62■■□□□ 1.21
CADM3-203ENST00000416746 SOGA1O94964 1423 aa22.62■■□□□ 1.21
CADM3-203ENST00000416746 MAGI1Q96QZ7 1491 aaPredicted RBP22.55■■□□□ 1.2
CADM3-203ENST00000416746 WDR97A6NE52 1622 aa22.54■■□□□ 1.2
CADM3-203ENST00000416746 FGD5Q6ZNL6 1462 aa22.51■■□□□ 1.19
CADM3-203ENST00000416746 GRIN2BQ13224 1484 aa22.49■■□□□ 1.19
CADM3-203ENST00000416746 GAPVD1Q14C86 1478 aa22.49■■□□□ 1.19
CADM3-203ENST00000416746 SYNJ2O15056 1496 aa22.48■■□□□ 1.19
CADM3-203ENST00000416746 CUX1P39880 1505 aa22.39■■□□□ 1.17
CADM3-203ENST00000416746 PBRM1Q86U86 1689 aa22.36■■□□□ 1.17
CADM3-203ENST00000416746 ERCC6L2Q5T890 1561 aa22.27■■□□□ 1.16
CADM3-203ENST00000416746 ABCA5Q8WWZ7 1642 aa22.22■■□□□ 1.15
CADM3-203ENST00000416746 GRIN2AQ12879 1464 aa22.21■■□□□ 1.15
CADM3-203ENST00000416746 ABCA10Q8WWZ4 1543 aa22.21■■□□□ 1.15
CADM3-203ENST00000416746 CEP170Q5SW79 1584 aa22.2■■□□□ 1.14
CADM3-203ENST00000416746 NUP160Q12769 1436 aa22.13■■□□□ 1.13
CADM3-203ENST00000416746 KIF13AQ9H1H9 1805 aa22.13■■□□□ 1.13
CADM3-203ENST00000416746 ADAMTS12P58397 1594 aa22.12■■□□□ 1.13
CADM3-203ENST00000416746 SHROOM2Q13796 1616 aa22.09■■□□□ 1.13
CADM3-203ENST00000416746 FHAD1B1AJZ9 1412 aa22.03■■□□□ 1.12
CADM3-203ENST00000416746 WRNQ14191 1432 aaPredicted RBP eCLIP22.03■■□□□ 1.12
CADM3-203ENST00000416746 PRG4Q92954 1404 aaPredicted RBP22■■□□□ 1.11
CADM3-203ENST00000416746 FAM69CQ0P6D2 419 aa22■■□□□ 1.11
CADM3-203ENST00000416746 ABCC10Q5T3U5 1492 aa21.96■■□□□ 1.11
CADM3-203ENST00000416746 NPM1P06748 294 aaKnown RBP eCLIP21.94■■□□□ 1.1
CADM3-203ENST00000416746 ERICH3Q5RHP9 1530 aa21.92■■□□□ 1.1
CADM3-203ENST00000416746 JPH4Q96JJ6 628 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms