RNA–Protein interactions for RNA: ENST00000416721.6

RBFOX2-208, Transcript of RNA binding fox-1 homolog 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RBFOX2, Length 1,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX2-208ENST00000416721 NISCHQ9Y2I1 1504 aa27.04■■□□□ 1.92
RBFOX2-208ENST00000416721 ABCC9O60706 1549 aa24.46■■□□□ 1.51
RBFOX2-208ENST00000416721 CCDC180Q9P1Z9 1646 aa24.11■■□□□ 1.45
RBFOX2-208ENST00000416721 DCAF8L2P0C7V8 631 aa23.3■■□□□ 1.32
RBFOX2-208ENST00000416721 RB1CC1Q8TDY2 1594 aa23.11■■□□□ 1.29
RBFOX2-208ENST00000416721 DNAJC5BQ9UF47 199 aa22.97■■□□□ 1.27
RBFOX2-208ENST00000416721 NACADO15069 1562 aa22.91■■□□□ 1.26
RBFOX2-208ENST00000416721 PABPN1Q86U42 306 aaKnown RBP eCLIP22.9■■□□□ 1.26
RBFOX2-208ENST00000416721 MYO15BQ96JP2 1530 aa22.47■■□□□ 1.19
RBFOX2-208ENST00000416721 UNC13AQ9UPW8 1703 aa22.4■■□□□ 1.18
RBFOX2-208ENST00000416721 BICRAQ9NZM4 1560 aa22.37■■□□□ 1.17
RBFOX2-208ENST00000416721 ZCCHC6Q5VYS8 1495 aaKnown RBP22.35■■□□□ 1.17
RBFOX2-208ENST00000416721 DCAF1Q9Y4B6 1507 aa22.21■■□□□ 1.15
RBFOX2-208ENST00000416721 SCRIBQ14160 1630 aa22.2■■□□□ 1.14
RBFOX2-208ENST00000416721 SHROOM4Q9ULL8 1493 aa22■■□□□ 1.11
RBFOX2-208ENST00000416721 CECR2Q9BXF3 1484 aa21.99■■□□□ 1.11
RBFOX2-208ENST00000416721 CC2D2AQ9P2K1 1620 aa21.95■■□□□ 1.1
RBFOX2-208ENST00000416721 EIF4G1Q04637 1599 aaKnown RBP21.88■■□□□ 1.09
RBFOX2-208ENST00000416721 NCAPD3P42695 1498 aa21.19■□□□□ 0.98
RBFOX2-208ENST00000416721 ERCC6Q03468 1493 aa21.16■□□□□ 0.98
RBFOX2-208ENST00000416721 ATAD2BQ9ULI0 1458 aa21.15■□□□□ 0.98
RBFOX2-208ENST00000416721 DNAJC5Q9H3Z4 198 aa21.1■□□□□ 0.97
RBFOX2-208ENST00000416721 SMARCA2P51531 1590 aa21.06■□□□□ 0.96
RBFOX2-208ENST00000416721 SMARCA4P51532 1647 aa21.06■□□□□ 0.96
RBFOX2-208ENST00000416721 BAZ1BQ9UIG0 1483 aaKnown RBP21.01■□□□□ 0.95
RBFOX2-208ENST00000416721 BAZ1AQ9NRL2 1556 aaPredicted RBP20.98■□□□□ 0.95
RBFOX2-208ENST00000416721 HMGXB3Q12766 1538 aa20.96■□□□□ 0.95
RBFOX2-208ENST00000416721 NESP48681 1621 aa20.96■□□□□ 0.95
RBFOX2-208ENST00000416721 CUX2O14529 1486 aa20.94■□□□□ 0.94
RBFOX2-208ENST00000416721 MROH2BQ7Z745 1585 aa20.87■□□□□ 0.93
RBFOX2-208ENST00000416721 PEG3Q9GZU2 1588 aa20.76■□□□□ 0.91
RBFOX2-208ENST00000416721 PDS5BQ9NTI5 1447 aa20.7■□□□□ 0.9
RBFOX2-208ENST00000416721 LAMC3Q9Y6N6 1575 aa20.68■□□□□ 0.9
RBFOX2-208ENST00000416721 CADPSQ9ULU8 1353 aa20.63■□□□□ 0.89
RBFOX2-208ENST00000416721 WIZO95785 1651 aa20.59■□□□□ 0.89
RBFOX2-208ENST00000416721 THOC2Q8NI27 1593 aaKnown RBP20.58■□□□□ 0.88
RBFOX2-208ENST00000416721 KIF21AQ7Z4S6 1674 aa20.54■□□□□ 0.88
RBFOX2-208ENST00000416721 MRC2Q9UBG0 1479 aa20.47■□□□□ 0.87
RBFOX2-208ENST00000416721 RSF1Q96T23 1441 aaPredicted RBP20.46■□□□□ 0.87
RBFOX2-208ENST00000416721 CEP164Q9UPV0 1460 aa20.41■□□□□ 0.86
RBFOX2-208ENST00000416721 FANCD2Q9BXW9 1451 aa20.39■□□□□ 0.85
RBFOX2-208ENST00000416721 TRIM41Q8WV44 630 aa20.39■□□□□ 0.85
RBFOX2-208ENST00000416721 WDR62O43379 1518 aa20.33■□□□□ 0.85
RBFOX2-208ENST00000416721 CFTRP13569 1480 aa20.31■□□□□ 0.84
RBFOX2-208ENST00000416721 TOP2AP11388 1531 aaKnown RBP20.31■□□□□ 0.84
RBFOX2-208ENST00000416721 OSCARQ8IYS5 282 aa20.2■□□□□ 0.82
RBFOX2-208ENST00000416721 URB2Q14146 1524 aaKnown RBP20.17■□□□□ 0.82
RBFOX2-208ENST00000416721 CCDC88BA6NC98 1476 aa20.17■□□□□ 0.82
RBFOX2-208ENST00000416721 ZNF608Q9ULD9 1512 aaPredicted RBP19.98■□□□□ 0.79
RBFOX2-208ENST00000416721 IFT140Q96RY7 1462 aa19.98■□□□□ 0.79
RBFOX2-208ENST00000416721 FBLN2P98095 1184 aa19.96■□□□□ 0.79
RBFOX2-208ENST00000416721 TOPBP1Q92547 1522 aa19.96■□□□□ 0.79
RBFOX2-208ENST00000416721 ABCC8Q09428 1581 aa19.9■□□□□ 0.78
RBFOX2-208ENST00000416721 PRDM2Q13029 1718 aa19.89■□□□□ 0.77
RBFOX2-208ENST00000416721 AQRO60306 1485 aaKnown RBP eCLIP19.86■□□□□ 0.77
RBFOX2-208ENST00000416721 SUPT5HO00267 1087 aaKnown RBP19.86■□□□□ 0.77
RBFOX2-208ENST00000416721 DNMBPQ6XZF7 1577 aa19.84■□□□□ 0.77
RBFOX2-208ENST00000416721 CYB5RLQ6IPT4 315 aa19.8■□□□□ 0.76
RBFOX2-208ENST00000416721 TDRD9Q8NDG6 1382 aaKnown RBP19.78■□□□□ 0.76
RBFOX2-208ENST00000416721 EIF4G3O43432 1585 aaKnown RBP19.78■□□□□ 0.76
RBFOX2-208ENST00000416721 SOGA1O94964 1423 aa19.77■□□□□ 0.76
RBFOX2-208ENST00000416721 RAD54L2Q9Y4B4 1467 aa19.77■□□□□ 0.76
RBFOX2-208ENST00000416721 POLA1P09884 1462 aaPredicted RBP19.76■□□□□ 0.75
RBFOX2-208ENST00000416721 RIMBP3CA6NJZ7 1639 aa19.73■□□□□ 0.75
RBFOX2-208ENST00000416721 RIMBP3BA6NNM3 1639 aa19.73■□□□□ 0.75
RBFOX2-208ENST00000416721 RIMBP3Q9UFD9 1639 aa19.73■□□□□ 0.75
RBFOX2-208ENST00000416721 CHMP7Q8WUX9 453 aaPredicted RBP19.71■□□□□ 0.75
RBFOX2-208ENST00000416721 ARHGEF11O15085 1522 aa19.71■□□□□ 0.75
RBFOX2-208ENST00000416721 TARBP1Q13395 1621 aaKnown RBP19.69■□□□□ 0.74
RBFOX2-208ENST00000416721 TRHP20396 242 aaPredicted RBP19.68■□□□□ 0.74
RBFOX2-208ENST00000416721 FGD5Q6ZNL6 1462 aa19.67■□□□□ 0.74
RBFOX2-208ENST00000416721 SNAPC4Q5SXM2 1469 aa19.6■□□□□ 0.73
RBFOX2-208ENST00000416721 CUX1P39880 1505 aa19.6■□□□□ 0.73
RBFOX2-208ENST00000416721 CHD1O14646 1710 aa19.59■□□□□ 0.73
RBFOX2-208ENST00000416721 GRIN2BQ13224 1484 aa19.54■□□□□ 0.72
RBFOX2-208ENST00000416721 ARAP1Q96P48 1450 aa19.51■□□□□ 0.71
RBFOX2-208ENST00000416721 GAPVD1Q14C86 1478 aa19.48■□□□□ 0.71
RBFOX2-208ENST00000416721 MAGI1Q96QZ7 1491 aaPredicted RBP19.48■□□□□ 0.71
RBFOX2-208ENST00000416721 SYNJ2O15056 1496 aa19.45■□□□□ 0.7
RBFOX2-208ENST00000416721 SYNJ1O43426 1573 aa19.44■□□□□ 0.7
RBFOX2-208ENST00000416721 WDR97A6NE52 1622 aa19.42■□□□□ 0.7
RBFOX2-208ENST00000416721 WRNQ14191 1432 aaPredicted RBP eCLIP19.41■□□□□ 0.7
RBFOX2-208ENST00000416721 CLASP1Q7Z460 1538 aa19.37■□□□□ 0.69
RBFOX2-208ENST00000416721 ABCA10Q8WWZ4 1543 aa19.37■□□□□ 0.69
RBFOX2-208ENST00000416721 PBRM1Q86U86 1689 aa19.31■□□□□ 0.68
RBFOX2-208ENST00000416721 ABCA5Q8WWZ7 1642 aa19.27■□□□□ 0.68
RBFOX2-208ENST00000416721 GRIN2AQ12879 1464 aa19.26■□□□□ 0.67
RBFOX2-208ENST00000416721 TOP2BQ02880 1626 aa19.22■□□□□ 0.67
RBFOX2-208ENST00000416721 FHAD1B1AJZ9 1412 aa19.22■□□□□ 0.67
RBFOX2-208ENST00000416721 ADAMTS12P58397 1594 aa19.17■□□□□ 0.66
RBFOX2-208ENST00000416721 BIVM-ERCC5R4GMW8 1640 aa19.17■□□□□ 0.66
RBFOX2-208ENST00000416721 ERCC6L2Q5T890 1561 aa19.16■□□□□ 0.66
RBFOX2-208ENST00000416721 CEP170Q5SW79 1584 aa19.15■□□□□ 0.66
RBFOX2-208ENST00000416721 NUP160Q12769 1436 aa19.15■□□□□ 0.66
RBFOX2-208ENST00000416721 AEBP2Q6ZN18 517 aaPredicted RBP19.14■□□□□ 0.65
RBFOX2-208ENST00000416721 JPH4Q96JJ6 628 aa19.14■□□□□ 0.65
RBFOX2-208ENST00000416721 ERICH3Q5RHP9 1530 aa19.11■□□□□ 0.65
RBFOX2-208ENST00000416721 PRG4Q92954 1404 aaPredicted RBP19.11■□□□□ 0.65
RBFOX2-208ENST00000416721 TTBK1Q5TCY1 1321 aaPredicted RBP19.08■□□□□ 0.65
RBFOX2-208ENST00000416721 NPM1P06748 294 aaKnown RBP eCLIP19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms