RNA–Protein interactions for RNA: ENST00000416606.1

TFAP2C-202, Transcript of transcription factor AP-2 gamma, humanhuman

TSL 3

Gene TFAP2C, Length 482 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFAP2C-202ENST00000416606 NISCHQ9Y2I1 1504 aa47.36■■■■■ 5.17
TFAP2C-202ENST00000416606 CCDC180Q9P1Z9 1646 aa42.44■■■■■ 4.38
TFAP2C-202ENST00000416606 ABCC9O60706 1549 aa41.98■■■■■ 4.31
TFAP2C-202ENST00000416606 RB1CC1Q8TDY2 1594 aa40.26■■■■■ 4.04
TFAP2C-202ENST00000416606 NACADO15069 1562 aa40.09■■■■■ 4.01
TFAP2C-202ENST00000416606 DCAF8L2P0C7V8 631 aa39.75■■■■□ 3.95
TFAP2C-202ENST00000416606 MYO15BQ96JP2 1530 aa39.73■■■■□ 3.95
TFAP2C-202ENST00000416606 ZCCHC6Q5VYS8 1495 aaKnown RBP39.3■■■■□ 3.88
TFAP2C-202ENST00000416606 DCAF1Q9Y4B6 1507 aa39.28■■■■□ 3.88
TFAP2C-202ENST00000416606 UNC13AQ9UPW8 1703 aa39.17■■■■□ 3.86
TFAP2C-202ENST00000416606 PABPN1Q86U42 306 aaKnown RBP eCLIP39.11■■■■□ 3.85
TFAP2C-202ENST00000416606 DNAJC5BQ9UF47 199 aa39.09■■■■□ 3.85
TFAP2C-202ENST00000416606 BICRAQ9NZM4 1560 aa38.95■■■■□ 3.83
TFAP2C-202ENST00000416606 SHROOM4Q9ULL8 1493 aa38.73■■■■□ 3.79
TFAP2C-202ENST00000416606 SCRIBQ14160 1630 aa38.49■■■■□ 3.75
TFAP2C-202ENST00000416606 EIF4G1Q04637 1599 aaKnown RBP38.02■■■■□ 3.68
TFAP2C-202ENST00000416606 CC2D2AQ9P2K1 1620 aa37.99■■■■□ 3.67
TFAP2C-202ENST00000416606 CECR2Q9BXF3 1484 aa37.88■■■■□ 3.65
TFAP2C-202ENST00000416606 NCAPD3P42695 1498 aa37.01■■■■□ 3.51
TFAP2C-202ENST00000416606 SMARCA4P51532 1647 aa36.85■■■■□ 3.49
TFAP2C-202ENST00000416606 ATAD2BQ9ULI0 1458 aa36.85■■■■□ 3.49
TFAP2C-202ENST00000416606 SMARCA2P51531 1590 aa36.84■■■■□ 3.49
TFAP2C-202ENST00000416606 BAZ1AQ9NRL2 1556 aaPredicted RBP36.79■■■■□ 3.48
TFAP2C-202ENST00000416606 HMGXB3Q12766 1538 aa36.73■■■■□ 3.47
TFAP2C-202ENST00000416606 PEG3Q9GZU2 1588 aa36.6■■■■□ 3.45
TFAP2C-202ENST00000416606 BAZ1BQ9UIG0 1483 aaKnown RBP36.5■■■■□ 3.43
TFAP2C-202ENST00000416606 MROH2BQ7Z745 1585 aa36.4■■■■□ 3.42
TFAP2C-202ENST00000416606 ERCC6Q03468 1493 aa36.32■■■■□ 3.41
TFAP2C-202ENST00000416606 CUX2O14529 1486 aa36.26■■■■□ 3.4
TFAP2C-202ENST00000416606 NESP48681 1621 aa36.11■■■■□ 3.37
TFAP2C-202ENST00000416606 LAMC3Q9Y6N6 1575 aa36.1■■■■□ 3.37
TFAP2C-202ENST00000416606 WIZO95785 1651 aa35.95■■■■□ 3.35
TFAP2C-202ENST00000416606 PDS5BQ9NTI5 1447 aa35.92■■■■□ 3.34
TFAP2C-202ENST00000416606 DNAJC5Q9H3Z4 198 aa35.88■■■■□ 3.33
TFAP2C-202ENST00000416606 CADPSQ9ULU8 1353 aa35.87■■■■□ 3.33
TFAP2C-202ENST00000416606 RSF1Q96T23 1441 aaPredicted RBP35.82■■■■□ 3.32
TFAP2C-202ENST00000416606 THOC2Q8NI27 1593 aaKnown RBP35.76■■■■□ 3.31
TFAP2C-202ENST00000416606 KIF21AQ7Z4S6 1674 aa35.68■■■■□ 3.3
TFAP2C-202ENST00000416606 TOP2AP11388 1531 aaKnown RBP35.62■■■■□ 3.29
TFAP2C-202ENST00000416606 CFTRP13569 1480 aa35.51■■■■□ 3.28
TFAP2C-202ENST00000416606 MRC2Q9UBG0 1479 aa35.51■■■■□ 3.28
TFAP2C-202ENST00000416606 CEP164Q9UPV0 1460 aa35.43■■■■□ 3.26
TFAP2C-202ENST00000416606 WDR62O43379 1518 aa35.41■■■■□ 3.26
TFAP2C-202ENST00000416606 FANCD2Q9BXW9 1451 aa35.4■■■■□ 3.26
TFAP2C-202ENST00000416606 CCDC88BA6NC98 1476 aa35.19■■■■□ 3.22
TFAP2C-202ENST00000416606 PRDM2Q13029 1718 aa35.13■■■■□ 3.21
TFAP2C-202ENST00000416606 URB2Q14146 1524 aaKnown RBP35.03■■■■□ 3.2
TFAP2C-202ENST00000416606 ABCC8Q09428 1581 aa34.87■■■■□ 3.17
TFAP2C-202ENST00000416606 IFT140Q96RY7 1462 aa34.76■■■■□ 3.15
TFAP2C-202ENST00000416606 TOPBP1Q92547 1522 aa34.75■■■■□ 3.15
TFAP2C-202ENST00000416606 DNMBPQ6XZF7 1577 aa34.67■■■■□ 3.14
TFAP2C-202ENST00000416606 OSCARQ8IYS5 282 aa34.65■■■■□ 3.14
TFAP2C-202ENST00000416606 ZNF608Q9ULD9 1512 aaPredicted RBP34.51■■■■□ 3.12
TFAP2C-202ENST00000416606 POLA1P09884 1462 aaPredicted RBP34.4■■■■□ 3.1
TFAP2C-202ENST00000416606 TARBP1Q13395 1621 aaKnown RBP34.4■■■■□ 3.1
TFAP2C-202ENST00000416606 EIF4G3O43432 1585 aaKnown RBP34.37■■■■□ 3.09
TFAP2C-202ENST00000416606 SUPT5HO00267 1087 aaKnown RBP34.35■■■■□ 3.09
TFAP2C-202ENST00000416606 SOGA1O94964 1423 aa34.3■■■■□ 3.08
TFAP2C-202ENST00000416606 AQRO60306 1485 aaKnown RBP eCLIP34.27■■■■□ 3.08
TFAP2C-202ENST00000416606 TRIM41Q8WV44 630 aa34.26■■■■□ 3.08
TFAP2C-202ENST00000416606 WDR97A6NE52 1622 aa34.26■■■■□ 3.07
TFAP2C-202ENST00000416606 FGD5Q6ZNL6 1462 aa34.21■■■■□ 3.07
TFAP2C-202ENST00000416606 RAD54L2Q9Y4B4 1467 aa34.2■■■■□ 3.06
TFAP2C-202ENST00000416606 CUX1P39880 1505 aa34.2■■■■□ 3.06
TFAP2C-202ENST00000416606 TDRD9Q8NDG6 1382 aaKnown RBP34.11■■■■□ 3.05
TFAP2C-202ENST00000416606 CHD1O14646 1710 aa34.03■■■■□ 3.04
TFAP2C-202ENST00000416606 RIMBP3CA6NJZ7 1639 aa34.01■■■■□ 3.04
TFAP2C-202ENST00000416606 RIMBP3BA6NNM3 1639 aa34.01■■■■□ 3.04
TFAP2C-202ENST00000416606 RIMBP3Q9UFD9 1639 aa34.01■■■■□ 3.04
TFAP2C-202ENST00000416606 FBLN2P98095 1184 aa34■■■■□ 3.03
TFAP2C-202ENST00000416606 GRIN2BQ13224 1484 aa33.99■■■■□ 3.03
TFAP2C-202ENST00000416606 MAGI1Q96QZ7 1491 aaPredicted RBP33.99■■■■□ 3.03
TFAP2C-202ENST00000416606 ARHGEF11O15085 1522 aa33.98■■■■□ 3.03
TFAP2C-202ENST00000416606 SNAPC4Q5SXM2 1469 aa33.94■■■■□ 3.02
TFAP2C-202ENST00000416606 ABCA10Q8WWZ4 1543 aa33.92■■■■□ 3.02
TFAP2C-202ENST00000416606 CHMP7Q8WUX9 453 aaPredicted RBP33.89■■■■□ 3.02
TFAP2C-202ENST00000416606 GAPVD1Q14C86 1478 aa33.88■■■■□ 3.01
TFAP2C-202ENST00000416606 WRNQ14191 1432 aaPredicted RBP eCLIP33.87■■■■□ 3.01
TFAP2C-202ENST00000416606 SYNJ2O15056 1496 aa33.84■■■■□ 3.01
TFAP2C-202ENST00000416606 TOP2BQ02880 1626 aa33.8■■■■□ 3
TFAP2C-202ENST00000416606 SYNJ1O43426 1573 aa33.79■■■■□ 3
TFAP2C-202ENST00000416606 BIVM-ERCC5R4GMW8 1640 aa33.79■■■■□ 3
TFAP2C-202ENST00000416606 ABCA5Q8WWZ7 1642 aa33.78■■■■□ 3
TFAP2C-202ENST00000416606 PBRM1Q86U86 1689 aa33.76■■■□□ 2.99
TFAP2C-202ENST00000416606 CLASP1Q7Z460 1538 aa33.73■■■□□ 2.99
TFAP2C-202ENST00000416606 CYB5RLQ6IPT4 315 aa33.71■■■□□ 2.99
TFAP2C-202ENST00000416606 ARAP1Q96P48 1450 aa33.63■■■□□ 2.97
TFAP2C-202ENST00000416606 ERICH3Q5RHP9 1530 aa33.53■■■□□ 2.96
TFAP2C-202ENST00000416606 GRIN2AQ12879 1464 aa33.51■■■□□ 2.96
TFAP2C-202ENST00000416606 FHAD1B1AJZ9 1412 aa33.51■■■□□ 2.95
TFAP2C-202ENST00000416606 ADAMTS12P58397 1594 aa33.49■■■□□ 2.95
TFAP2C-202ENST00000416606 NUP160Q12769 1436 aa33.42■■■□□ 2.94
TFAP2C-202ENST00000416606 CEP170Q5SW79 1584 aa33.3■■■□□ 2.92
TFAP2C-202ENST00000416606 TRHP20396 242 aaPredicted RBP33.24■■■□□ 2.91
TFAP2C-202ENST00000416606 SHROOM2Q13796 1616 aa33.21■■■□□ 2.91
TFAP2C-202ENST00000416606 KIF27Q86VH2 1401 aa33.2■■■□□ 2.91
TFAP2C-202ENST00000416606 IGF1RP08069 1367 aa33.12■■■□□ 2.89
TFAP2C-202ENST00000416606 JPH4Q96JJ6 628 aa33.1■■■□□ 2.89
TFAP2C-202ENST00000416606 ERCC6L2Q5T890 1561 aa33.08■■■□□ 2.89
TFAP2C-202ENST00000416606 CUL7Q14999 1698 aa33.07■■■□□ 2.89
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms