RNA–Protein interactions for RNA: ENST00000416585.1

SNX30-202, Transcript of sorting nexin family member 30, humanhuman

TSL 3

Gene SNX30, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX30-202ENST00000416585 NISCHQ9Y2I1 1504 aa28.35■■■□□ 2.13
SNX30-202ENST00000416585 CCDC180Q9P1Z9 1646 aa25.61■■□□□ 1.69
SNX30-202ENST00000416585 ABCC9O60706 1549 aa25.46■■□□□ 1.67
SNX30-202ENST00000416585 RB1CC1Q8TDY2 1594 aa24.33■■□□□ 1.49
SNX30-202ENST00000416585 NACADO15069 1562 aa24.12■■□□□ 1.45
SNX30-202ENST00000416585 DCAF8L2P0C7V8 631 aa23.95■■□□□ 1.42
SNX30-202ENST00000416585 UNC13AQ9UPW8 1703 aa23.88■■□□□ 1.41
SNX30-202ENST00000416585 MYO15BQ96JP2 1530 aa23.73■■□□□ 1.39
SNX30-202ENST00000416585 DNAJC5BQ9UF47 199 aa23.68■■□□□ 1.38
SNX30-202ENST00000416585 PABPN1Q86U42 306 aaKnown RBP eCLIP23.61■■□□□ 1.37
SNX30-202ENST00000416585 BICRAQ9NZM4 1560 aa23.5■■□□□ 1.35
SNX30-202ENST00000416585 ZCCHC6Q5VYS8 1495 aaKnown RBP23.49■■□□□ 1.35
SNX30-202ENST00000416585 DCAF1Q9Y4B6 1507 aa23.43■■□□□ 1.34
SNX30-202ENST00000416585 SCRIBQ14160 1630 aa23.28■■□□□ 1.32
SNX30-202ENST00000416585 SHROOM4Q9ULL8 1493 aa23.26■■□□□ 1.31
SNX30-202ENST00000416585 CC2D2AQ9P2K1 1620 aa23.05■■□□□ 1.28
SNX30-202ENST00000416585 EIF4G1Q04637 1599 aaKnown RBP22.98■■□□□ 1.27
SNX30-202ENST00000416585 CECR2Q9BXF3 1484 aa22.93■■□□□ 1.26
SNX30-202ENST00000416585 SMARCA4P51532 1647 aa22.19■■□□□ 1.14
SNX30-202ENST00000416585 NCAPD3P42695 1498 aa22.16■■□□□ 1.14
SNX30-202ENST00000416585 SMARCA2P51531 1590 aa22.16■■□□□ 1.14
SNX30-202ENST00000416585 ATAD2BQ9ULI0 1458 aa22.11■■□□□ 1.13
SNX30-202ENST00000416585 HMGXB3Q12766 1538 aa22.1■■□□□ 1.13
SNX30-202ENST00000416585 BAZ1AQ9NRL2 1556 aaPredicted RBP22.08■■□□□ 1.13
SNX30-202ENST00000416585 ERCC6Q03468 1493 aa22.06■■□□□ 1.12
SNX30-202ENST00000416585 CUX2O14529 1486 aa21.97■■□□□ 1.11
SNX30-202ENST00000416585 BAZ1BQ9UIG0 1483 aaKnown RBP21.97■■□□□ 1.11
SNX30-202ENST00000416585 PEG3Q9GZU2 1588 aa21.92■■□□□ 1.1
SNX30-202ENST00000416585 NESP48681 1621 aa21.84■■□□□ 1.09
SNX30-202ENST00000416585 DNAJC5Q9H3Z4 198 aa21.83■■□□□ 1.09
SNX30-202ENST00000416585 MROH2BQ7Z745 1585 aa21.82■■□□□ 1.08
SNX30-202ENST00000416585 LAMC3Q9Y6N6 1575 aa21.8■■□□□ 1.08
SNX30-202ENST00000416585 KIF21AQ7Z4S6 1674 aa21.73■■□□□ 1.07
SNX30-202ENST00000416585 THOC2Q8NI27 1593 aaKnown RBP21.7■■□□□ 1.06
SNX30-202ENST00000416585 WIZO95785 1651 aa21.66■■□□□ 1.06
SNX30-202ENST00000416585 PDS5BQ9NTI5 1447 aa21.62■■□□□ 1.05
SNX30-202ENST00000416585 CADPSQ9ULU8 1353 aa21.49■■□□□ 1.03
SNX30-202ENST00000416585 MRC2Q9UBG0 1479 aa21.43■■□□□ 1.02
SNX30-202ENST00000416585 WDR62O43379 1518 aa21.38■■□□□ 1.01
SNX30-202ENST00000416585 CEP164Q9UPV0 1460 aa21.38■■□□□ 1.01
SNX30-202ENST00000416585 TOP2AP11388 1531 aaKnown RBP21.36■■□□□ 1.01
SNX30-202ENST00000416585 PRDM2Q13029 1718 aa21.36■■□□□ 1.01
SNX30-202ENST00000416585 RSF1Q96T23 1441 aaPredicted RBP21.32■■□□□ 1
SNX30-202ENST00000416585 FANCD2Q9BXW9 1451 aa21.31■■□□□ 1
SNX30-202ENST00000416585 CFTRP13569 1480 aa21.26■□□□□ 0.99
SNX30-202ENST00000416585 URB2Q14146 1524 aaKnown RBP21.09■□□□□ 0.97
SNX30-202ENST00000416585 CCDC88BA6NC98 1476 aa21.04■□□□□ 0.96
SNX30-202ENST00000416585 TRIM41Q8WV44 630 aa20.98■□□□□ 0.95
SNX30-202ENST00000416585 ABCC8Q09428 1581 aa20.92■□□□□ 0.94
SNX30-202ENST00000416585 OSCARQ8IYS5 282 aa20.91■□□□□ 0.94
SNX30-202ENST00000416585 IFT140Q96RY7 1462 aa20.91■□□□□ 0.94
SNX30-202ENST00000416585 TOPBP1Q92547 1522 aa20.9■□□□□ 0.94
SNX30-202ENST00000416585 DNMBPQ6XZF7 1577 aa20.89■□□□□ 0.93
SNX30-202ENST00000416585 EIF4G3O43432 1585 aaKnown RBP20.84■□□□□ 0.93
SNX30-202ENST00000416585 ZNF608Q9ULD9 1512 aaPredicted RBP20.82■□□□□ 0.92
SNX30-202ENST00000416585 CHD1O14646 1710 aa20.76■□□□□ 0.91
SNX30-202ENST00000416585 RIMBP3CA6NJZ7 1639 aa20.75■□□□□ 0.91
SNX30-202ENST00000416585 RIMBP3BA6NNM3 1639 aa20.75■□□□□ 0.91
SNX30-202ENST00000416585 RIMBP3Q9UFD9 1639 aa20.75■□□□□ 0.91
SNX30-202ENST00000416585 TARBP1Q13395 1621 aaKnown RBP20.74■□□□□ 0.91
SNX30-202ENST00000416585 POLA1P09884 1462 aaPredicted RBP20.67■□□□□ 0.9
SNX30-202ENST00000416585 AQRO60306 1485 aaKnown RBP eCLIP20.62■□□□□ 0.89
SNX30-202ENST00000416585 ARHGEF11O15085 1522 aa20.62■□□□□ 0.89
SNX30-202ENST00000416585 WDR97A6NE52 1622 aa20.61■□□□□ 0.89
SNX30-202ENST00000416585 SOGA1O94964 1423 aa20.57■□□□□ 0.88
SNX30-202ENST00000416585 FGD5Q6ZNL6 1462 aa20.56■□□□□ 0.88
SNX30-202ENST00000416585 RAD54L2Q9Y4B4 1467 aa20.56■□□□□ 0.88
SNX30-202ENST00000416585 FBLN2P98095 1184 aa20.56■□□□□ 0.88
SNX30-202ENST00000416585 CUX1P39880 1505 aa20.53■□□□□ 0.88
SNX30-202ENST00000416585 PBRM1Q86U86 1689 aa20.52■□□□□ 0.88
SNX30-202ENST00000416585 TDRD9Q8NDG6 1382 aaKnown RBP20.49■□□□□ 0.87
SNX30-202ENST00000416585 SNAPC4Q5SXM2 1469 aa20.49■□□□□ 0.87
SNX30-202ENST00000416585 SYNJ1O43426 1573 aa20.46■□□□□ 0.87
SNX30-202ENST00000416585 MAGI1Q96QZ7 1491 aaPredicted RBP20.44■□□□□ 0.86
SNX30-202ENST00000416585 SUPT5HO00267 1087 aaKnown RBP20.44■□□□□ 0.86
SNX30-202ENST00000416585 GRIN2BQ13224 1484 aa20.43■□□□□ 0.86
SNX30-202ENST00000416585 CYB5RLQ6IPT4 315 aa20.42■□□□□ 0.86
SNX30-202ENST00000416585 CHMP7Q8WUX9 453 aaPredicted RBP20.39■□□□□ 0.85
SNX30-202ENST00000416585 ARAP1Q96P48 1450 aa20.38■□□□□ 0.85
SNX30-202ENST00000416585 CLASP1Q7Z460 1538 aa20.37■□□□□ 0.85
SNX30-202ENST00000416585 SYNJ2O15056 1496 aa20.36■□□□□ 0.85
SNX30-202ENST00000416585 GAPVD1Q14C86 1478 aa20.36■□□□□ 0.85
SNX30-202ENST00000416585 ABCA5Q8WWZ7 1642 aa20.35■□□□□ 0.85
SNX30-202ENST00000416585 ABCA10Q8WWZ4 1543 aa20.32■□□□□ 0.84
SNX30-202ENST00000416585 BIVM-ERCC5R4GMW8 1640 aa20.31■□□□□ 0.84
SNX30-202ENST00000416585 TRHP20396 242 aaPredicted RBP20.27■□□□□ 0.84
SNX30-202ENST00000416585 TOP2BQ02880 1626 aa20.27■□□□□ 0.83
SNX30-202ENST00000416585 WRNQ14191 1432 aaPredicted RBP eCLIP20.24■□□□□ 0.83
SNX30-202ENST00000416585 ADAMTS12P58397 1594 aa20.21■□□□□ 0.83
SNX30-202ENST00000416585 GRIN2AQ12879 1464 aa20.17■□□□□ 0.82
SNX30-202ENST00000416585 ERICH3Q5RHP9 1530 aa20.11■□□□□ 0.81
SNX30-202ENST00000416585 CEP170Q5SW79 1584 aa20.1■□□□□ 0.81
SNX30-202ENST00000416585 FHAD1B1AJZ9 1412 aa20.08■□□□□ 0.8
SNX30-202ENST00000416585 SHROOM2Q13796 1616 aa20.05■□□□□ 0.8
SNX30-202ENST00000416585 NUP160Q12769 1436 aa20.04■□□□□ 0.8
SNX30-202ENST00000416585 ERCC6L2Q5T890 1561 aa20.02■□□□□ 0.8
SNX30-202ENST00000416585 RUSC2Q8N2Y8 1516 aa19.92■□□□□ 0.78
SNX30-202ENST00000416585 CUL7Q14999 1698 aa19.92■□□□□ 0.78
SNX30-202ENST00000416585 PRG4Q92954 1404 aaPredicted RBP19.87■□□□□ 0.77
SNX30-202ENST00000416585 KIF13AQ9H1H9 1805 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms