RNA–Protein interactions for RNA: ENST00000416581.1

LINC01398-201, Transcript of long intergenic non-protein coding RNA 1398, humanhuman

TSL 1 (best)

Gene LINC01398, Length 1,129 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01398-201ENST00000416581 NISCHQ9Y2I1 1504 aa33.44■■■□□ 2.94
LINC01398-201ENST00000416581 CCDC180Q9P1Z9 1646 aa30.15■■■□□ 2.42
LINC01398-201ENST00000416581 ABCC9O60706 1549 aa29.91■■■□□ 2.38
LINC01398-201ENST00000416581 RB1CC1Q8TDY2 1594 aa28.66■■■□□ 2.18
LINC01398-201ENST00000416581 NACADO15069 1562 aa28.47■■■□□ 2.15
LINC01398-201ENST00000416581 MYO15BQ96JP2 1530 aa28.14■■■□□ 2.1
LINC01398-201ENST00000416581 DNAJC5BQ9UF47 199 aa28.14■■■□□ 2.1
LINC01398-201ENST00000416581 DCAF8L2P0C7V8 631 aa28.05■■■□□ 2.08
LINC01398-201ENST00000416581 UNC13AQ9UPW8 1703 aa27.89■■■□□ 2.06
LINC01398-201ENST00000416581 DCAF1Q9Y4B6 1507 aa27.75■■■□□ 2.03
LINC01398-201ENST00000416581 ZCCHC6Q5VYS8 1495 aaKnown RBP27.74■■■□□ 2.03
LINC01398-201ENST00000416581 PABPN1Q86U42 306 aaKnown RBP eCLIP27.73■■■□□ 2.03
LINC01398-201ENST00000416581 BICRAQ9NZM4 1560 aa27.67■■■□□ 2.02
LINC01398-201ENST00000416581 SHROOM4Q9ULL8 1493 aa27.58■■■□□ 2.01
LINC01398-201ENST00000416581 SCRIBQ14160 1630 aa27.29■■□□□ 1.96
LINC01398-201ENST00000416581 CC2D2AQ9P2K1 1620 aa27.08■■□□□ 1.93
LINC01398-201ENST00000416581 EIF4G1Q04637 1599 aaKnown RBP27.05■■□□□ 1.92
LINC01398-201ENST00000416581 CECR2Q9BXF3 1484 aa27.01■■□□□ 1.91
LINC01398-201ENST00000416581 DNAJC5Q9H3Z4 198 aa26.43■■□□□ 1.82
LINC01398-201ENST00000416581 NCAPD3P42695 1498 aa26.22■■□□□ 1.79
LINC01398-201ENST00000416581 SMARCA2P51531 1590 aa26.14■■□□□ 1.78
LINC01398-201ENST00000416581 ATAD2BQ9ULI0 1458 aa26.1■■□□□ 1.77
LINC01398-201ENST00000416581 SMARCA4P51532 1647 aa26.1■■□□□ 1.77
LINC01398-201ENST00000416581 HMGXB3Q12766 1538 aa26.09■■□□□ 1.77
LINC01398-201ENST00000416581 BAZ1AQ9NRL2 1556 aaPredicted RBP26.04■■□□□ 1.76
LINC01398-201ENST00000416581 CUX2O14529 1486 aa25.95■■□□□ 1.74
LINC01398-201ENST00000416581 ERCC6Q03468 1493 aa25.93■■□□□ 1.74
LINC01398-201ENST00000416581 PEG3Q9GZU2 1588 aa25.91■■□□□ 1.74
LINC01398-201ENST00000416581 BAZ1BQ9UIG0 1483 aaKnown RBP25.89■■□□□ 1.73
LINC01398-201ENST00000416581 LAMC3Q9Y6N6 1575 aa25.69■■□□□ 1.7
LINC01398-201ENST00000416581 MROH2BQ7Z745 1585 aa25.68■■□□□ 1.7
LINC01398-201ENST00000416581 NESP48681 1621 aa25.64■■□□□ 1.7
LINC01398-201ENST00000416581 THOC2Q8NI27 1593 aaKnown RBP25.52■■□□□ 1.68
LINC01398-201ENST00000416581 PDS5BQ9NTI5 1447 aa25.52■■□□□ 1.68
LINC01398-201ENST00000416581 KIF21AQ7Z4S6 1674 aa25.42■■□□□ 1.66
LINC01398-201ENST00000416581 CADPSQ9ULU8 1353 aa25.39■■□□□ 1.65
LINC01398-201ENST00000416581 WIZO95785 1651 aa25.39■■□□□ 1.65
LINC01398-201ENST00000416581 MRC2Q9UBG0 1479 aa25.27■■□□□ 1.64
LINC01398-201ENST00000416581 WDR62O43379 1518 aa25.21■■□□□ 1.63
LINC01398-201ENST00000416581 CEP164Q9UPV0 1460 aa25.18■■□□□ 1.62
LINC01398-201ENST00000416581 TOP2AP11388 1531 aaKnown RBP25.17■■□□□ 1.62
LINC01398-201ENST00000416581 RSF1Q96T23 1441 aaPredicted RBP25.17■■□□□ 1.62
LINC01398-201ENST00000416581 CFTRP13569 1480 aa25.12■■□□□ 1.61
LINC01398-201ENST00000416581 FANCD2Q9BXW9 1451 aa25.1■■□□□ 1.61
LINC01398-201ENST00000416581 PRDM2Q13029 1718 aa24.98■■□□□ 1.59
LINC01398-201ENST00000416581 TRIM41Q8WV44 630 aa24.9■■□□□ 1.58
LINC01398-201ENST00000416581 URB2Q14146 1524 aaKnown RBP24.84■■□□□ 1.57
LINC01398-201ENST00000416581 CCDC88BA6NC98 1476 aa24.79■■□□□ 1.56
LINC01398-201ENST00000416581 ABCC8Q09428 1581 aa24.72■■□□□ 1.55
LINC01398-201ENST00000416581 IFT140Q96RY7 1462 aa24.69■■□□□ 1.54
LINC01398-201ENST00000416581 OSCARQ8IYS5 282 aa24.66■■□□□ 1.54
LINC01398-201ENST00000416581 TOPBP1Q92547 1522 aa24.62■■□□□ 1.53
LINC01398-201ENST00000416581 DNMBPQ6XZF7 1577 aa24.59■■□□□ 1.53
LINC01398-201ENST00000416581 ZNF608Q9ULD9 1512 aaPredicted RBP24.49■■□□□ 1.51
LINC01398-201ENST00000416581 EIF4G3O43432 1585 aaKnown RBP24.47■■□□□ 1.51
LINC01398-201ENST00000416581 TARBP1Q13395 1621 aaKnown RBP24.4■■□□□ 1.5
LINC01398-201ENST00000416581 POLA1P09884 1462 aaPredicted RBP24.36■■□□□ 1.49
LINC01398-201ENST00000416581 WDR97A6NE52 1622 aa24.35■■□□□ 1.49
LINC01398-201ENST00000416581 RIMBP3CA6NJZ7 1639 aa24.33■■□□□ 1.49
LINC01398-201ENST00000416581 RIMBP3BA6NNM3 1639 aa24.33■■□□□ 1.49
LINC01398-201ENST00000416581 RIMBP3Q9UFD9 1639 aa24.33■■□□□ 1.49
LINC01398-201ENST00000416581 ARHGEF11O15085 1522 aa24.28■■□□□ 1.48
LINC01398-201ENST00000416581 CHD1O14646 1710 aa24.27■■□□□ 1.48
LINC01398-201ENST00000416581 AQRO60306 1485 aaKnown RBP eCLIP24.26■■□□□ 1.47
LINC01398-201ENST00000416581 SOGA1O94964 1423 aa24.25■■□□□ 1.47
LINC01398-201ENST00000416581 FGD5Q6ZNL6 1462 aa24.21■■□□□ 1.47
LINC01398-201ENST00000416581 RAD54L2Q9Y4B4 1467 aa24.18■■□□□ 1.46
LINC01398-201ENST00000416581 CUX1P39880 1505 aa24.15■■□□□ 1.46
LINC01398-201ENST00000416581 MAGI1Q96QZ7 1491 aaPredicted RBP24.14■■□□□ 1.46
LINC01398-201ENST00000416581 TDRD9Q8NDG6 1382 aaKnown RBP24.12■■□□□ 1.45
LINC01398-201ENST00000416581 FBLN2P98095 1184 aa24.11■■□□□ 1.45
LINC01398-201ENST00000416581 GRIN2BQ13224 1484 aa24.1■■□□□ 1.45
LINC01398-201ENST00000416581 SNAPC4Q5SXM2 1469 aa24.1■■□□□ 1.45
LINC01398-201ENST00000416581 SYNJ1O43426 1573 aa24.08■■□□□ 1.44
LINC01398-201ENST00000416581 SYNJ2O15056 1496 aa24.02■■□□□ 1.44
LINC01398-201ENST00000416581 CLASP1Q7Z460 1538 aa24.01■■□□□ 1.43
LINC01398-201ENST00000416581 CHMP7Q8WUX9 453 aaPredicted RBP24.01■■□□□ 1.43
LINC01398-201ENST00000416581 ARAP1Q96P48 1450 aa24■■□□□ 1.43
LINC01398-201ENST00000416581 PBRM1Q86U86 1689 aa24■■□□□ 1.43
LINC01398-201ENST00000416581 CYB5RLQ6IPT4 315 aa24■■□□□ 1.43
LINC01398-201ENST00000416581 ABCA10Q8WWZ4 1543 aa23.99■■□□□ 1.43
LINC01398-201ENST00000416581 GAPVD1Q14C86 1478 aa23.98■■□□□ 1.43
LINC01398-201ENST00000416581 SUPT5HO00267 1087 aaKnown RBP23.96■■□□□ 1.43
LINC01398-201ENST00000416581 ABCA5Q8WWZ7 1642 aa23.95■■□□□ 1.42
LINC01398-201ENST00000416581 WRNQ14191 1432 aaPredicted RBP eCLIP23.9■■□□□ 1.42
LINC01398-201ENST00000416581 BIVM-ERCC5R4GMW8 1640 aa23.88■■□□□ 1.41
LINC01398-201ENST00000416581 TOP2BQ02880 1626 aa23.85■■□□□ 1.41
LINC01398-201ENST00000416581 GRIN2AQ12879 1464 aa23.77■■□□□ 1.4
LINC01398-201ENST00000416581 TRHP20396 242 aaPredicted RBP23.77■■□□□ 1.4
LINC01398-201ENST00000416581 ADAMTS12P58397 1594 aa23.77■■□□□ 1.4
LINC01398-201ENST00000416581 ERICH3Q5RHP9 1530 aa23.73■■□□□ 1.39
LINC01398-201ENST00000416581 FHAD1B1AJZ9 1412 aa23.71■■□□□ 1.39
LINC01398-201ENST00000416581 NUP160Q12769 1436 aa23.68■■□□□ 1.38
LINC01398-201ENST00000416581 CEP170Q5SW79 1584 aa23.64■■□□□ 1.37
LINC01398-201ENST00000416581 SHROOM2Q13796 1616 aa23.61■■□□□ 1.37
LINC01398-201ENST00000416581 AEBP2Q6ZN18 517 aaPredicted RBP23.57■■□□□ 1.36
LINC01398-201ENST00000416581 ERCC6L2Q5T890 1561 aa23.49■■□□□ 1.35
LINC01398-201ENST00000416581 RUSC2Q8N2Y8 1516 aa23.43■■□□□ 1.34
LINC01398-201ENST00000416581 CUL7Q14999 1698 aa23.42■■□□□ 1.34
LINC01398-201ENST00000416581 KIF27Q86VH2 1401 aa23.41■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms