RNA–Protein interactions for RNA: ENST00000416579.5

SFXN5-204, Transcript of sideroflexin 5, humanhuman

TSL 3

Gene SFXN5, Length 895 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN5-204ENST00000416579 NISCHQ9Y2I1 1504 aa36.35■■■■□ 3.41
SFXN5-204ENST00000416579 CCDC180Q9P1Z9 1646 aa32.52■■■□□ 2.8
SFXN5-204ENST00000416579 ABCC9O60706 1549 aa32.41■■■□□ 2.78
SFXN5-204ENST00000416579 RB1CC1Q8TDY2 1594 aa30.88■■■□□ 2.53
SFXN5-204ENST00000416579 DCAF8L2P0C7V8 631 aa30.81■■■□□ 2.52
SFXN5-204ENST00000416579 NACADO15069 1562 aa30.67■■■□□ 2.5
SFXN5-204ENST00000416579 PABPN1Q86U42 306 aaKnown RBP eCLIP30.23■■■□□ 2.43
SFXN5-204ENST00000416579 UNC13AQ9UPW8 1703 aa30.22■■■□□ 2.43
SFXN5-204ENST00000416579 MYO15BQ96JP2 1530 aa30.21■■■□□ 2.43
SFXN5-204ENST00000416579 ZCCHC6Q5VYS8 1495 aaKnown RBP30.18■■■□□ 2.42
SFXN5-204ENST00000416579 DNAJC5BQ9UF47 199 aa30.08■■■□□ 2.41
SFXN5-204ENST00000416579 DCAF1Q9Y4B6 1507 aa29.95■■■□□ 2.38
SFXN5-204ENST00000416579 BICRAQ9NZM4 1560 aa29.92■■■□□ 2.38
SFXN5-204ENST00000416579 SCRIBQ14160 1630 aa29.79■■■□□ 2.36
SFXN5-204ENST00000416579 SHROOM4Q9ULL8 1493 aa29.44■■■□□ 2.3
SFXN5-204ENST00000416579 CC2D2AQ9P2K1 1620 aa29.23■■■□□ 2.27
SFXN5-204ENST00000416579 EIF4G1Q04637 1599 aaKnown RBP29.21■■■□□ 2.27
SFXN5-204ENST00000416579 CECR2Q9BXF3 1484 aa29.11■■■□□ 2.25
SFXN5-204ENST00000416579 SMARCA4P51532 1647 aa28.36■■■□□ 2.13
SFXN5-204ENST00000416579 ATAD2BQ9ULI0 1458 aa28.27■■■□□ 2.12
SFXN5-204ENST00000416579 NCAPD3P42695 1498 aa28.27■■■□□ 2.12
SFXN5-204ENST00000416579 SMARCA2P51531 1590 aa28.22■■■□□ 2.11
SFXN5-204ENST00000416579 BAZ1AQ9NRL2 1556 aaPredicted RBP28.22■■■□□ 2.11
SFXN5-204ENST00000416579 HMGXB3Q12766 1538 aa28.12■■■□□ 2.09
SFXN5-204ENST00000416579 BAZ1BQ9UIG0 1483 aaKnown RBP28.08■■■□□ 2.09
SFXN5-204ENST00000416579 MROH2BQ7Z745 1585 aa28.06■■■□□ 2.08
SFXN5-204ENST00000416579 ERCC6Q03468 1493 aa27.98■■■□□ 2.07
SFXN5-204ENST00000416579 PEG3Q9GZU2 1588 aa27.96■■■□□ 2.07
SFXN5-204ENST00000416579 NESP48681 1621 aa27.89■■■□□ 2.05
SFXN5-204ENST00000416579 WIZO95785 1651 aa27.79■■■□□ 2.04
SFXN5-204ENST00000416579 CUX2O14529 1486 aa27.7■■■□□ 2.03
SFXN5-204ENST00000416579 LAMC3Q9Y6N6 1575 aa27.65■■■□□ 2.02
SFXN5-204ENST00000416579 KIF21AQ7Z4S6 1674 aa27.56■■■□□ 2
SFXN5-204ENST00000416579 RSF1Q96T23 1441 aaPredicted RBP27.53■■■□□ 2
SFXN5-204ENST00000416579 THOC2Q8NI27 1593 aaKnown RBP27.51■■□□□ 1.99
SFXN5-204ENST00000416579 PDS5BQ9NTI5 1447 aa27.5■■□□□ 1.99
SFXN5-204ENST00000416579 CADPSQ9ULU8 1353 aa27.47■■□□□ 1.99
SFXN5-204ENST00000416579 DNAJC5Q9H3Z4 198 aa27.4■■□□□ 1.98
SFXN5-204ENST00000416579 TOP2AP11388 1531 aaKnown RBP27.4■■□□□ 1.98
SFXN5-204ENST00000416579 MRC2Q9UBG0 1479 aa27.27■■□□□ 1.96
SFXN5-204ENST00000416579 CEP164Q9UPV0 1460 aa27.24■■□□□ 1.95
SFXN5-204ENST00000416579 FANCD2Q9BXW9 1451 aa27.21■■□□□ 1.95
SFXN5-204ENST00000416579 CFTRP13569 1480 aa27.19■■□□□ 1.94
SFXN5-204ENST00000416579 WDR62O43379 1518 aa27.16■■□□□ 1.94
SFXN5-204ENST00000416579 CCDC88BA6NC98 1476 aa27.09■■□□□ 1.93
SFXN5-204ENST00000416579 PRDM2Q13029 1718 aa27.04■■□□□ 1.92
SFXN5-204ENST00000416579 URB2Q14146 1524 aaKnown RBP26.96■■□□□ 1.91
SFXN5-204ENST00000416579 TOPBP1Q92547 1522 aa26.72■■□□□ 1.87
SFXN5-204ENST00000416579 SUPT5HO00267 1087 aaKnown RBP26.69■■□□□ 1.86
SFXN5-204ENST00000416579 DNMBPQ6XZF7 1577 aa26.64■■□□□ 1.86
SFXN5-204ENST00000416579 IFT140Q96RY7 1462 aa26.64■■□□□ 1.86
SFXN5-204ENST00000416579 ABCC8Q09428 1581 aa26.62■■□□□ 1.85
SFXN5-204ENST00000416579 ZNF608Q9ULD9 1512 aaPredicted RBP26.61■■□□□ 1.85
SFXN5-204ENST00000416579 OSCARQ8IYS5 282 aa26.53■■□□□ 1.84
SFXN5-204ENST00000416579 TRIM41Q8WV44 630 aa26.52■■□□□ 1.84
SFXN5-204ENST00000416579 EIF4G3O43432 1585 aaKnown RBP26.5■■□□□ 1.83
SFXN5-204ENST00000416579 POLA1P09884 1462 aaPredicted RBP26.45■■□□□ 1.82
SFXN5-204ENST00000416579 TARBP1Q13395 1621 aaKnown RBP26.44■■□□□ 1.82
SFXN5-204ENST00000416579 AQRO60306 1485 aaKnown RBP eCLIP26.42■■□□□ 1.822e-7■■■■□ 22.1
SFXN5-204ENST00000416579 RAD54L2Q9Y4B4 1467 aa26.41■■□□□ 1.82
SFXN5-204ENST00000416579 FGD5Q6ZNL6 1462 aa26.36■■□□□ 1.81
SFXN5-204ENST00000416579 CUX1P39880 1505 aa26.35■■□□□ 1.81
SFXN5-204ENST00000416579 SOGA1O94964 1423 aa26.35■■□□□ 1.81
SFXN5-204ENST00000416579 FBLN2P98095 1184 aa26.3■■□□□ 1.8
SFXN5-204ENST00000416579 CHD1O14646 1710 aa26.3■■□□□ 1.8
SFXN5-204ENST00000416579 TDRD9Q8NDG6 1382 aaKnown RBP26.3■■□□□ 1.8
SFXN5-204ENST00000416579 RIMBP3CA6NJZ7 1639 aa26.21■■□□□ 1.79
SFXN5-204ENST00000416579 RIMBP3BA6NNM3 1639 aa26.21■■□□□ 1.79
SFXN5-204ENST00000416579 RIMBP3Q9UFD9 1639 aa26.21■■□□□ 1.79
SFXN5-204ENST00000416579 SNAPC4Q5SXM2 1469 aa26.17■■□□□ 1.78
SFXN5-204ENST00000416579 WDR97A6NE52 1622 aa26.13■■□□□ 1.77
SFXN5-204ENST00000416579 ARHGEF11O15085 1522 aa26.12■■□□□ 1.77
SFXN5-204ENST00000416579 GRIN2BQ13224 1484 aa26.08■■□□□ 1.77
SFXN5-204ENST00000416579 PBRM1Q86U86 1689 aa26.08■■□□□ 1.77
SFXN5-204ENST00000416579 CHMP7Q8WUX9 453 aaPredicted RBP26.06■■□□□ 1.76
SFXN5-204ENST00000416579 GAPVD1Q14C86 1478 aa26.04■■□□□ 1.76
SFXN5-204ENST00000416579 MAGI1Q96QZ7 1491 aaPredicted RBP26.04■■□□□ 1.76
SFXN5-204ENST00000416579 WRNQ14191 1432 aaPredicted RBP eCLIP26.02■■□□□ 1.76
SFXN5-204ENST00000416579 SYNJ1O43426 1573 aa26■■□□□ 1.75
SFXN5-204ENST00000416579 ABCA10Q8WWZ4 1543 aa26■■□□□ 1.75
SFXN5-204ENST00000416579 BIVM-ERCC5R4GMW8 1640 aa25.99■■□□□ 1.75
SFXN5-204ENST00000416579 TOP2BQ02880 1626 aa25.98■■□□□ 1.75
SFXN5-204ENST00000416579 ABCA5Q8WWZ7 1642 aa25.98■■□□□ 1.75
SFXN5-204ENST00000416579 CYB5RLQ6IPT4 315 aa25.97■■□□□ 1.75
SFXN5-204ENST00000416579 SYNJ2O15056 1496 aa25.96■■□□□ 1.75
SFXN5-204ENST00000416579 CLASP1Q7Z460 1538 aa25.89■■□□□ 1.74
SFXN5-204ENST00000416579 ARAP1Q96P48 1450 aa25.87■■□□□ 1.73
SFXN5-204ENST00000416579 ADAMTS12P58397 1594 aa25.79■■□□□ 1.72
SFXN5-204ENST00000416579 GRIN2AQ12879 1464 aa25.76■■□□□ 1.71
SFXN5-204ENST00000416579 FHAD1B1AJZ9 1412 aa25.69■■□□□ 1.7
SFXN5-204ENST00000416579 ERICH3Q5RHP9 1530 aa25.68■■□□□ 1.7
SFXN5-204ENST00000416579 CEP170Q5SW79 1584 aa25.68■■□□□ 1.7
SFXN5-204ENST00000416579 TRHP20396 242 aaPredicted RBP25.67■■□□□ 1.7
SFXN5-204ENST00000416579 NUP160Q12769 1436 aa25.6■■□□□ 1.69
SFXN5-204ENST00000416579 ERCC6L2Q5T890 1561 aa25.58■■□□□ 1.69
SFXN5-204ENST00000416579 KIF27Q86VH2 1401 aa25.5■■□□□ 1.67
SFXN5-204ENST00000416579 SHROOM2Q13796 1616 aa25.48■■□□□ 1.67
SFXN5-204ENST00000416579 PRG4Q92954 1404 aaPredicted RBP25.42■■□□□ 1.66
SFXN5-204ENST00000416579 RUSC2Q8N2Y8 1516 aa25.42■■□□□ 1.66
SFXN5-204ENST00000416579 CUL7Q14999 1698 aa25.41■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms