RNA–Protein interactions for RNA: ENST00000416539.1

HNRNPA1P66-201, Transcript of heterogeneous nuclear ribonucleoprotein A1 pseudogene 66, humanhuman

BASIC

Gene HNRNPA1P66, Length 934 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPA1P66-201ENST00000416539 NISCHQ9Y2I1 1504 aa24.66■■□□□ 1.54
HNRNPA1P66-201ENST00000416539 AEBP2Q6ZN18 517 aaPredicted RBP22.16■■□□□ 1.14
HNRNPA1P66-201ENST00000416539 CCDC180Q9P1Z9 1646 aa22.05■■□□□ 1.12
HNRNPA1P66-201ENST00000416539 CHIC1Q5VXU3 224 aa22■■□□□ 1.11
HNRNPA1P66-201ENST00000416539 ABCC9O60706 1549 aa21.45■■□□□ 1.02
HNRNPA1P66-201ENST00000416539 RB1CC1Q8TDY2 1594 aa20.69■□□□□ 0.9
HNRNPA1P66-201ENST00000416539 NACADO15069 1562 aa20.64■□□□□ 0.9
HNRNPA1P66-201ENST00000416539 DCAF8L2P0C7V8 631 aa20.6■□□□□ 0.89
HNRNPA1P66-201ENST00000416539 ZCCHC6Q5VYS8 1495 aaKnown RBP20.55■□□□□ 0.88
HNRNPA1P66-201ENST00000416539 MYO15BQ96JP2 1530 aa20.48■□□□□ 0.87
HNRNPA1P66-201ENST00000416539 DCAF1Q9Y4B6 1507 aa20.41■□□□□ 0.86
HNRNPA1P66-201ENST00000416539 UNC13AQ9UPW8 1703 aa20.34■□□□□ 0.85
HNRNPA1P66-201ENST00000416539 SCRIBQ14160 1630 aa20.08■□□□□ 0.8
HNRNPA1P66-201ENST00000416539 BICRAQ9NZM4 1560 aa20.02■□□□□ 0.8
HNRNPA1P66-201ENST00000416539 PABPN1Q86U42 306 aaKnown RBP eCLIP19.98■□□□□ 0.79
HNRNPA1P66-201ENST00000416539 SHROOM4Q9ULL8 1493 aa19.81■□□□□ 0.76
HNRNPA1P66-201ENST00000416539 DNAJC5BQ9UF47 199 aa19.57■□□□□ 0.72
HNRNPA1P66-201ENST00000416539 EIF4G1Q04637 1599 aaKnown RBP19.51■□□□□ 0.71
HNRNPA1P66-201ENST00000416539 CC2D2AQ9P2K1 1620 aa19.44■□□□□ 0.7
HNRNPA1P66-201ENST00000416539 PHF23Q9BUL5 403 aaPredicted RBP19.28■□□□□ 0.68
HNRNPA1P66-201ENST00000416539 CECR2Q9BXF3 1484 aa19.26■□□□□ 0.67
HNRNPA1P66-201ENST00000416539 SMARCA4P51532 1647 aa19.19■□□□□ 0.66
HNRNPA1P66-201ENST00000416539 BAZ1AQ9NRL2 1556 aaPredicted RBP19.15■□□□□ 0.66
HNRNPA1P66-201ENST00000416539 SMARCA2P51531 1590 aa19.06■□□□□ 0.64
HNRNPA1P66-201ENST00000416539 MROH2BQ7Z745 1585 aa19.01■□□□□ 0.63
HNRNPA1P66-201ENST00000416539 ATAD2BQ9ULI0 1458 aa19■□□□□ 0.63
HNRNPA1P66-201ENST00000416539 NCAPD3P42695 1498 aa18.98■□□□□ 0.63
HNRNPA1P66-201ENST00000416539 PEG3Q9GZU2 1588 aa18.97■□□□□ 0.63
HNRNPA1P66-201ENST00000416539 HMGXB3Q12766 1538 aa18.95■□□□□ 0.62
HNRNPA1P66-201ENST00000416539 SENP3Q9H4L4 574 aaPredicted RBP18.94■□□□□ 0.62
HNRNPA1P66-201ENST00000416539 BAZ1BQ9UIG0 1483 aaKnown RBP18.9■□□□□ 0.62
HNRNPA1P66-201ENST00000416539 WIZO95785 1651 aa18.88■□□□□ 0.61
HNRNPA1P66-201ENST00000416539 RSF1Q96T23 1441 aaPredicted RBP18.76■□□□□ 0.59
HNRNPA1P66-201ENST00000416539 TOP2AP11388 1531 aaKnown RBP18.64■□□□□ 0.57
HNRNPA1P66-201ENST00000416539 LAMC3Q9Y6N6 1575 aa18.57■□□□□ 0.56
HNRNPA1P66-201ENST00000416539 NESP48681 1621 aa18.56■□□□□ 0.56
HNRNPA1P66-201ENST00000416539 ERCC6Q03468 1493 aa18.52■□□□□ 0.55
HNRNPA1P66-201ENST00000416539 KIF21AQ7Z4S6 1674 aa18.47■□□□□ 0.55
HNRNPA1P66-201ENST00000416539 PRDM2Q13029 1718 aa18.43■□□□□ 0.54
HNRNPA1P66-201ENST00000416539 CADPSQ9ULU8 1353 aa18.42■□□□□ 0.54
HNRNPA1P66-201ENST00000416539 PDS5BQ9NTI5 1447 aa18.39■□□□□ 0.53
HNRNPA1P66-201ENST00000416539 CCDC88BA6NC98 1476 aa18.38■□□□□ 0.53
HNRNPA1P66-201ENST00000416539 CFTRP13569 1480 aa18.33■□□□□ 0.53
HNRNPA1P66-201ENST00000416539 SUPT5HO00267 1087 aaKnown RBP18.33■□□□□ 0.52
HNRNPA1P66-201ENST00000416539 THOC2Q8NI27 1593 aaKnown RBP18.33■□□□□ 0.52
HNRNPA1P66-201ENST00000416539 CUX2O14529 1486 aa18.28■□□□□ 0.52
HNRNPA1P66-201ENST00000416539 FANCD2Q9BXW9 1451 aa18.26■□□□□ 0.51
HNRNPA1P66-201ENST00000416539 CEP164Q9UPV0 1460 aa18.26■□□□□ 0.51
HNRNPA1P66-201ENST00000416539 MRC2Q9UBG0 1479 aa18.21■□□□□ 0.51
HNRNPA1P66-201ENST00000416539 WDR62O43379 1518 aa18.16■□□□□ 0.5
HNRNPA1P66-201ENST00000416539 URB2Q14146 1524 aaKnown RBP18.07■□□□□ 0.48
HNRNPA1P66-201ENST00000416539 PLPPR3Q6T4P5 718 aa18.04■□□□□ 0.48
HNRNPA1P66-201ENST00000416539 ABCC8Q09428 1581 aa17.99■□□□□ 0.47
HNRNPA1P66-201ENST00000416539 DNMBPQ6XZF7 1577 aa17.99■□□□□ 0.47
HNRNPA1P66-201ENST00000416539 TOPBP1Q92547 1522 aa17.98■□□□□ 0.47
HNRNPA1P66-201ENST00000416539 IFT140Q96RY7 1462 aa17.85■□□□□ 0.45
HNRNPA1P66-201ENST00000416539 CUX1P39880 1505 aa17.84■□□□□ 0.45
HNRNPA1P66-201ENST00000416539 TARBP1Q13395 1621 aaKnown RBP17.81■□□□□ 0.44
HNRNPA1P66-201ENST00000416539 POLA1P09884 1462 aaPredicted RBP17.81■□□□□ 0.44
HNRNPA1P66-201ENST00000416539 FGD5Q6ZNL6 1462 aa17.79■□□□□ 0.44
HNRNPA1P66-201ENST00000416539 EIF4G3O43432 1585 aaKnown RBP17.77■□□□□ 0.44
HNRNPA1P66-201ENST00000416539 BIVM-ERCC5R4GMW8 1640 aa17.76■□□□□ 0.43
HNRNPA1P66-201ENST00000416539 ZNF608Q9ULD9 1512 aaPredicted RBP17.75■□□□□ 0.43
HNRNPA1P66-201ENST00000416539 TOP2BQ02880 1626 aa17.73■□□□□ 0.43
HNRNPA1P66-201ENST00000416539 SOGA1O94964 1423 aa17.72■□□□□ 0.43
HNRNPA1P66-201ENST00000416539 WRNQ14191 1432 aaPredicted RBP eCLIP17.72■□□□□ 0.43
HNRNPA1P66-201ENST00000416539 WDR97A6NE52 1622 aa17.72■□□□□ 0.43
HNRNPA1P66-201ENST00000416539 SYNJ1O43426 1573 aa17.72■□□□□ 0.43
HNRNPA1P66-201ENST00000416539 RAD54L2Q9Y4B4 1467 aa17.72■□□□□ 0.43
HNRNPA1P66-201ENST00000416539 AQRO60306 1485 aaKnown RBP eCLIP17.64■□□□□ 0.41
HNRNPA1P66-201ENST00000416539 DNAJC5Q9H3Z4 198 aa17.64■□□□□ 0.41
HNRNPA1P66-201ENST00000416539 PBRM1Q86U86 1689 aa17.64■□□□□ 0.41
HNRNPA1P66-201ENST00000416539 CHD1O14646 1710 aa17.61■□□□□ 0.41
HNRNPA1P66-201ENST00000416539 TDRD9Q8NDG6 1382 aaKnown RBP17.61■□□□□ 0.41
HNRNPA1P66-201ENST00000416539 ABCA10Q8WWZ4 1543 aa17.6■□□□□ 0.41
HNRNPA1P66-201ENST00000416539 ABCA5Q8WWZ7 1642 aa17.58■□□□□ 0.41
HNRNPA1P66-201ENST00000416539 GAPVD1Q14C86 1478 aa17.55■□□□□ 0.4
HNRNPA1P66-201ENST00000416539 GRIN2BQ13224 1484 aa17.53■□□□□ 0.4
HNRNPA1P66-201ENST00000416539 SNAPC4Q5SXM2 1469 aa17.51■□□□□ 0.39
HNRNPA1P66-201ENST00000416539 MAGI1Q96QZ7 1491 aaPredicted RBP17.5■□□□□ 0.39
HNRNPA1P66-201ENST00000416539 OSCARQ8IYS5 282 aa17.5■□□□□ 0.39
HNRNPA1P66-201ENST00000416539 FBLN2P98095 1184 aa17.46■□□□□ 0.39
HNRNPA1P66-201ENST00000416539 FOXD1Q16676 465 aa17.44■□□□□ 0.38
HNRNPA1P66-201ENST00000416539 SYNJ2O15056 1496 aa17.43■□□□□ 0.38
HNRNPA1P66-201ENST00000416539 ERICH3Q5RHP9 1530 aa17.42■□□□□ 0.38
HNRNPA1P66-201ENST00000416539 ADAMTS12P58397 1594 aa17.41■□□□□ 0.38
HNRNPA1P66-201ENST00000416539 CHMP7Q8WUX9 453 aaPredicted RBP17.4■□□□□ 0.38
HNRNPA1P66-201ENST00000416539 KIF27Q86VH2 1401 aa17.36■□□□□ 0.37
HNRNPA1P66-201ENST00000416539 CUL7Q14999 1698 aa17.33■□□□□ 0.37
HNRNPA1P66-201ENST00000416539 FHAD1B1AJZ9 1412 aa17.32■□□□□ 0.36
HNRNPA1P66-201ENST00000416539 GRIN2AQ12879 1464 aa17.31■□□□□ 0.36
HNRNPA1P66-201ENST00000416539 TRIM41Q8WV44 630 aa17.31■□□□□ 0.36
HNRNPA1P66-201ENST00000416539 RIMBP3CA6NJZ7 1639 aa17.3■□□□□ 0.36
HNRNPA1P66-201ENST00000416539 RIMBP3BA6NNM3 1639 aa17.3■□□□□ 0.36
HNRNPA1P66-201ENST00000416539 RIMBP3Q9UFD9 1639 aa17.3■□□□□ 0.36
HNRNPA1P66-201ENST00000416539 CLASP1Q7Z460 1538 aa17.3■□□□□ 0.36
HNRNPA1P66-201ENST00000416539 ARHGEF11O15085 1522 aa17.26■□□□□ 0.35
HNRNPA1P66-201ENST00000416539 CEP170Q5SW79 1584 aa17.25■□□□□ 0.35
HNRNPA1P66-201ENST00000416539 IGF1RP08069 1367 aa17.22■□□□□ 0.35
HNRNPA1P66-201ENST00000416539 NUP160Q12769 1436 aa17.21■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms