RNA–Protein interactions for RNA: ENST00000416372.5

RTN4R-202, Transcript of reticulon 4 receptor, humanhuman

APPRIS ALT2 TSL 3

Gene RTN4R, Length 1,777 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4R-202ENST00000416372 NISCHQ9Y2I1 1504 aa40.85■■■■■ 4.13
RTN4R-202ENST00000416372 CCDC180Q9P1Z9 1646 aa35.61■■■■□ 3.29
RTN4R-202ENST00000416372 ZCCHC6Q5VYS8 1495 aaKnown RBP34.3■■■■□ 3.08
RTN4R-202ENST00000416372 DCAF8L2P0C7V8 631 aa33.82■■■■□ 3
RTN4R-202ENST00000416372 DCAF1Q9Y4B6 1507 aa33.75■■■□□ 2.99
RTN4R-202ENST00000416372 ABCC9O60706 1549 aa33.7■■■□□ 2.99
RTN4R-202ENST00000416372 SHROOM4Q9ULL8 1493 aa33.39■■■□□ 2.94
RTN4R-202ENST00000416372 MYO15BQ96JP2 1530 aa33.34■■■□□ 2.93
RTN4R-202ENST00000416372 NACADO15069 1562 aa33.17■■■□□ 2.9
RTN4R-202ENST00000416372 RB1CC1Q8TDY2 1594 aa32.9■■■□□ 2.86
RTN4R-202ENST00000416372 SCRIBQ14160 1630 aa32.78■■■□□ 2.84
RTN4R-202ENST00000416372 UNC13AQ9UPW8 1703 aa32.24■■■□□ 2.75
RTN4R-202ENST00000416372 SUPT5HO00267 1087 aaKnown RBP32.14■■■□□ 2.74
RTN4R-202ENST00000416372 BICRAQ9NZM4 1560 aa31.88■■■□□ 2.69
RTN4R-202ENST00000416372 PABPN1Q86U42 306 aaKnown RBP eCLIP31.8■■■□□ 2.68
RTN4R-202ENST00000416372 CECR2Q9BXF3 1484 aa31.75■■■□□ 2.67
RTN4R-202ENST00000416372 RSF1Q96T23 1441 aaPredicted RBP31.69■■■□□ 2.66
RTN4R-202ENST00000416372 MROH2BQ7Z745 1585 aa31.56■■■□□ 2.64
RTN4R-202ENST00000416372 BAZ1AQ9NRL2 1556 aaPredicted RBP31.55■■■□□ 2.64
RTN4R-202ENST00000416372 SMARCA4P51532 1647 aa31.41■■■□□ 2.62
RTN4R-202ENST00000416372 WIZO95785 1651 aa31.32■■■□□ 2.61
RTN4R-202ENST00000416372 TOP2AP11388 1531 aaKnown RBP30.99■■■□□ 2.55
RTN4R-202ENST00000416372 PEG3Q9GZU2 1588 aa30.99■■■□□ 2.55
RTN4R-202ENST00000416372 EIF4G1Q04637 1599 aaKnown RBP30.93■■■□□ 2.54
RTN4R-202ENST00000416372 ATAD2BQ9ULI0 1458 aa30.88■■■□□ 2.53
RTN4R-202ENST00000416372 SMARCA2P51531 1590 aa30.88■■■□□ 2.53
RTN4R-202ENST00000416372 CHIC1Q5VXU3 224 aa30.74■■■□□ 2.51
RTN4R-202ENST00000416372 BAZ1BQ9UIG0 1483 aaKnown RBP30.73■■■□□ 2.51
RTN4R-202ENST00000416372 CCDC88BA6NC98 1476 aa30.67■■■□□ 2.5
RTN4R-202ENST00000416372 NCAPD3P42695 1498 aa30.6■■■□□ 2.49
RTN4R-202ENST00000416372 HMGXB3Q12766 1538 aa30.57■■■□□ 2.48
RTN4R-202ENST00000416372 CC2D2AQ9P2K1 1620 aa30.49■■■□□ 2.47
RTN4R-202ENST00000416372 DNAJC5BQ9UF47 199 aa30.47■■■□□ 2.47
RTN4R-202ENST00000416372 TRIM41Q8WV44 630 aa30.2■■■□□ 2.43
RTN4R-202ENST00000416372 ABCC8Q09428 1581 aa30.05■■■□□ 2.4
RTN4R-202ENST00000416372 CFTRP13569 1480 aa29.93■■■□□ 2.38
RTN4R-202ENST00000416372 WRNQ14191 1432 aaPredicted RBP eCLIP29.85■■■□□ 2.37
RTN4R-202ENST00000416372 CADPSQ9ULU8 1353 aa29.84■■■□□ 2.37
RTN4R-202ENST00000416372 PRDM2Q13029 1718 aa29.8■■■□□ 2.36
RTN4R-202ENST00000416372 SYNJ1O43426 1573 aa29.72■■■□□ 2.35
RTN4R-202ENST00000416372 FAM9AQ8IZU1 332 aaPredicted RBP29.68■■■□□ 2.34
RTN4R-202ENST00000416372 TOP2BQ02880 1626 aa29.59■■■□□ 2.33
RTN4R-202ENST00000416372 NESP48681 1621 aa29.58■■■□□ 2.33
RTN4R-202ENST00000416372 LAMC3Q9Y6N6 1575 aa29.58■■■□□ 2.33
RTN4R-202ENST00000416372 LOC105371045A0A1W2PR82 267 aa29.58■■■□□ 2.33
RTN4R-202ENST00000416372 BIVM-ERCC5R4GMW8 1640 aa29.57■■■□□ 2.32
RTN4R-202ENST00000416372 FANCD2Q9BXW9 1451 aa29.52■■■□□ 2.32
RTN4R-202ENST00000416372 CUX1P39880 1505 aa29.52■■■□□ 2.32
RTN4R-202ENST00000416372 SOGA1O94964 1423 aa29.48■■■□□ 2.31
RTN4R-202ENST00000416372 EEA1Q15075 1411 aa29.42■■■□□ 2.3
RTN4R-202ENST00000416372 RUSC2Q8N2Y8 1516 aa29.37■■■□□ 2.29
RTN4R-202ENST00000416372 PDS5BQ9NTI5 1447 aa29.36■■■□□ 2.29
RTN4R-202ENST00000416372 CEP164Q9UPV0 1460 aa29.34■■■□□ 2.29
RTN4R-202ENST00000416372 CSRNP3Q8WYN3 585 aa29.29■■■□□ 2.28
RTN4R-202ENST00000416372 EHMT2Q96KQ7 1210 aa29.28■■■□□ 2.28
RTN4R-202ENST00000416372 DNMBPQ6XZF7 1577 aa29.25■■■□□ 2.27
RTN4R-202ENST00000416372 KIF21AQ7Z4S6 1674 aa29.23■■■□□ 2.27
RTN4R-202ENST00000416372 FGD5Q6ZNL6 1462 aa29.2■■■□□ 2.27
RTN4R-202ENST00000416372 TOPBP1Q92547 1522 aa29.2■■■□□ 2.26
RTN4R-202ENST00000416372 URB2Q14146 1524 aaKnown RBP29.14■■■□□ 2.26
RTN4R-202ENST00000416372 KIF27Q86VH2 1401 aa29.1■■■□□ 2.25
RTN4R-202ENST00000416372 POLA1P09884 1462 aaPredicted RBP29.05■■■□□ 2.24
RTN4R-202ENST00000416372 KIF21BO75037 1637 aa29.04■■■□□ 2.24
RTN4R-202ENST00000416372 CUX2O14529 1486 aa29.03■■■□□ 2.24
RTN4R-202ENST00000416372 GOLGA3Q08378 1498 aa29.03■■■□□ 2.24
RTN4R-202ENST00000416372 MRC2Q9UBG0 1479 aa28.98■■■□□ 2.23
RTN4R-202ENST00000416372 RAD54L2Q9Y4B4 1467 aa28.97■■■□□ 2.23
RTN4R-202ENST00000416372 UBTFP17480 764 aaKnown RBP28.95■■■□□ 2.22
RTN4R-202ENST00000416372 ABCA10Q8WWZ4 1543 aa28.93■■■□□ 2.22
RTN4R-202ENST00000416372 TNIKQ9UKE5 1360 aa28.93■■■□□ 2.22
RTN4R-202ENST00000416372 ERCC6Q03468 1493 aa28.92■■■□□ 2.22
RTN4R-202ENST00000416372 RAPGEF2Q9Y4G8 1499 aa28.88■■■□□ 2.21
RTN4R-202ENST00000416372 PRXQ9BXM0 1461 aa28.87■■■□□ 2.21
RTN4R-202ENST00000416372 ERICH3Q5RHP9 1530 aa28.84■■■□□ 2.21
RTN4R-202ENST00000416372 WDR97A6NE52 1622 aa28.83■■■□□ 2.21
RTN4R-202ENST00000416372 IGF1RP08069 1367 aa28.82■■■□□ 2.2
RTN4R-202ENST00000416372 WDR62O43379 1518 aa28.81■■■□□ 2.2
RTN4R-202ENST00000416372 CEP162Q5TB80 1403 aa28.79■■■□□ 2.2
RTN4R-202ENST00000416372 TARBP1Q13395 1621 aaKnown RBP28.75■■■□□ 2.19
RTN4R-202ENST00000416372 THOC2Q8NI27 1593 aaKnown RBP28.72■■■□□ 2.19
RTN4R-202ENST00000416372 CARMIL1Q5VZK9 1371 aa28.69■■■□□ 2.18
RTN4R-202ENST00000416372 TDRD9Q8NDG6 1382 aaKnown RBP28.69■■■□□ 2.18
RTN4R-202ENST00000416372 ABCA5Q8WWZ7 1642 aa28.69■■■□□ 2.18
RTN4R-202ENST00000416372 GAPVD1Q14C86 1478 aa28.66■■■□□ 2.18
RTN4R-202ENST00000416372 IFT140Q96RY7 1462 aa28.63■■■□□ 2.17
RTN4R-202ENST00000416372 CUL7Q14999 1698 aa28.61■■■□□ 2.17
RTN4R-202ENST00000416372 CLIP1P30622 1438 aa28.57■■■□□ 2.16
RTN4R-202ENST00000416372 AQRO60306 1485 aaKnown RBP eCLIP28.51■■■□□ 2.15
RTN4R-202ENST00000416372 PBRM1Q86U86 1689 aa28.5■■■□□ 2.15
RTN4R-202ENST00000416372 RANGAP1P46060 587 aaPredicted RBP28.49■■■□□ 2.15
RTN4R-202ENST00000416372 ZNF608Q9ULD9 1512 aaPredicted RBP28.47■■■□□ 2.15
RTN4R-202ENST00000416372 GRIN2BQ13224 1484 aa28.43■■■□□ 2.14
RTN4R-202ENST00000416372 EIF4G3O43432 1585 aaKnown RBP28.38■■■□□ 2.13
RTN4R-202ENST00000416372 FHAD1B1AJZ9 1412 aa28.34■■■□□ 2.13
RTN4R-202ENST00000416372 ADAMTS12P58397 1594 aa28.33■■■□□ 2.13
RTN4R-202ENST00000416372 CTTNBP2Q8WZ74 1663 aa28.31■■■□□ 2.12
RTN4R-202ENST00000416372 VPS8Q8N3P4 1428 aa28.3■■■□□ 2.12
RTN4R-202ENST00000416372 ARAP1Q96P48 1450 aa28.27■■■□□ 2.12
RTN4R-202ENST00000416372 ARHGAP35Q9NRY4 1499 aa28.26■■■□□ 2.11
RTN4R-202ENST00000416372 PCGF6Q9BYE7 350 aa28.24■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms