RNA–Protein interactions for RNA: ENST00000416268.1

LRRTM1-204, Transcript of leucine rich repeat transmembrane neuronal 1, humanhuman

TSL 3

Gene LRRTM1, Length 879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1-204ENST00000416268 NISCHQ9Y2I1 1504 aa43.03■■■■■ 4.48
LRRTM1-204ENST00000416268 ABCC9O60706 1549 aa38.84■■■■□ 3.81
LRRTM1-204ENST00000416268 CCDC180Q9P1Z9 1646 aa38.66■■■■□ 3.78
LRRTM1-204ENST00000416268 RB1CC1Q8TDY2 1594 aa36.92■■■■□ 3.5
LRRTM1-204ENST00000416268 NACADO15069 1562 aa36.63■■■■□ 3.45
LRRTM1-204ENST00000416268 DCAF8L2P0C7V8 631 aa36.5■■■■□ 3.43
LRRTM1-204ENST00000416268 DNAJC5BQ9UF47 199 aa36.49■■■■□ 3.43
LRRTM1-204ENST00000416268 PABPN1Q86U42 306 aaKnown RBP eCLIP36.14■■■■□ 3.38
LRRTM1-204ENST00000416268 MYO15BQ96JP2 1530 aa36.07■■■■□ 3.36
LRRTM1-204ENST00000416268 UNC13AQ9UPW8 1703 aa35.92■■■■□ 3.34
LRRTM1-204ENST00000416268 BICRAQ9NZM4 1560 aa35.75■■■■□ 3.31
LRRTM1-204ENST00000416268 ZCCHC6Q5VYS8 1495 aaKnown RBP35.62■■■■□ 3.29
LRRTM1-204ENST00000416268 DCAF1Q9Y4B6 1507 aa35.54■■■■□ 3.28
LRRTM1-204ENST00000416268 SHROOM4Q9ULL8 1493 aa35.38■■■■□ 3.25
LRRTM1-204ENST00000416268 SCRIBQ14160 1630 aa35.22■■■■□ 3.23
LRRTM1-204ENST00000416268 CC2D2AQ9P2K1 1620 aa35.04■■■■□ 3.2
LRRTM1-204ENST00000416268 CECR2Q9BXF3 1484 aa35.02■■■■□ 3.2
LRRTM1-204ENST00000416268 EIF4G1Q04637 1599 aaKnown RBP34.95■■■■□ 3.18
LRRTM1-204ENST00000416268 NCAPD3P42695 1498 aa33.81■■■■□ 3
LRRTM1-204ENST00000416268 DNAJC5Q9H3Z4 198 aa33.7■■■□□ 2.99
LRRTM1-204ENST00000416268 ATAD2BQ9ULI0 1458 aa33.68■■■□□ 2.98
LRRTM1-204ENST00000416268 SMARCA2P51531 1590 aa33.61■■■□□ 2.97
LRRTM1-204ENST00000416268 ERCC6Q03468 1493 aa33.61■■■□□ 2.97
LRRTM1-204ENST00000416268 SMARCA4P51532 1647 aa33.58■■■□□ 2.97
LRRTM1-204ENST00000416268 CUX2O14529 1486 aa33.56■■■□□ 2.96
LRRTM1-204ENST00000416268 HMGXB3Q12766 1538 aa33.53■■■□□ 2.96
LRRTM1-204ENST00000416268 BAZ1AQ9NRL2 1556 aaPredicted RBP33.44■■■□□ 2.94
LRRTM1-204ENST00000416268 BAZ1BQ9UIG0 1483 aaKnown RBP33.38■■■□□ 2.93
LRRTM1-204ENST00000416268 NESP48681 1621 aa33.28■■■□□ 2.92
LRRTM1-204ENST00000416268 PEG3Q9GZU2 1588 aa33.26■■■□□ 2.91
LRRTM1-204ENST00000416268 MROH2BQ7Z745 1585 aa33.13■■■□□ 2.89
LRRTM1-204ENST00000416268 LAMC3Q9Y6N6 1575 aa33.08■■■□□ 2.89
LRRTM1-204ENST00000416268 THOC2Q8NI27 1593 aaKnown RBP32.96■■■□□ 2.87
LRRTM1-204ENST00000416268 PDS5BQ9NTI5 1447 aa32.94■■■□□ 2.86
LRRTM1-204ENST00000416268 KIF21AQ7Z4S6 1674 aa32.82■■■□□ 2.84
LRRTM1-204ENST00000416268 CADPSQ9ULU8 1353 aa32.8■■■□□ 2.84
LRRTM1-204ENST00000416268 WIZO95785 1651 aa32.7■■■□□ 2.83
LRRTM1-204ENST00000416268 MRC2Q9UBG0 1479 aa32.63■■■□□ 2.81
LRRTM1-204ENST00000416268 WDR62O43379 1518 aa32.51■■■□□ 2.8
LRRTM1-204ENST00000416268 CEP164Q9UPV0 1460 aa32.48■■■□□ 2.79
LRRTM1-204ENST00000416268 RSF1Q96T23 1441 aaPredicted RBP32.42■■■□□ 2.78
LRRTM1-204ENST00000416268 FANCD2Q9BXW9 1451 aa32.42■■■□□ 2.78
LRRTM1-204ENST00000416268 CFTRP13569 1480 aa32.37■■■□□ 2.77
LRRTM1-204ENST00000416268 TOP2AP11388 1531 aaKnown RBP32.34■■■□□ 2.77
LRRTM1-204ENST00000416268 TRIM41Q8WV44 630 aa32.21■■■□□ 2.75
LRRTM1-204ENST00000416268 URB2Q14146 1524 aaKnown RBP32.11■■■□□ 2.73
LRRTM1-204ENST00000416268 OSCARQ8IYS5 282 aa32.05■■■□□ 2.72
LRRTM1-204ENST00000416268 CCDC88BA6NC98 1476 aa31.97■■■□□ 2.71
LRRTM1-204ENST00000416268 PRDM2Q13029 1718 aa31.95■■■□□ 2.71
LRRTM1-204ENST00000416268 IFT140Q96RY7 1462 aa31.84■■■□□ 2.69
LRRTM1-204ENST00000416268 TOPBP1Q92547 1522 aa31.76■■■□□ 2.68
LRRTM1-204ENST00000416268 ABCC8Q09428 1581 aa31.76■■■□□ 2.67
LRRTM1-204ENST00000416268 ZNF608Q9ULD9 1512 aaPredicted RBP31.74■■■□□ 2.67
LRRTM1-204ENST00000416268 DNMBPQ6XZF7 1577 aa31.64■■■□□ 2.66
LRRTM1-204ENST00000416268 EIF4G3O43432 1585 aaKnown RBP31.56■■■□□ 2.64
LRRTM1-204ENST00000416268 RIMBP3CA6NJZ7 1639 aa31.54■■■□□ 2.64
LRRTM1-204ENST00000416268 RIMBP3BA6NNM3 1639 aa31.54■■■□□ 2.64
LRRTM1-204ENST00000416268 RIMBP3Q9UFD9 1639 aa31.54■■■□□ 2.64
LRRTM1-204ENST00000416268 AQRO60306 1485 aaKnown RBP eCLIP31.46■■■□□ 2.63
LRRTM1-204ENST00000416268 ARHGEF11O15085 1522 aa31.46■■■□□ 2.63
LRRTM1-204ENST00000416268 TARBP1Q13395 1621 aaKnown RBP31.45■■■□□ 2.62
LRRTM1-204ENST00000416268 POLA1P09884 1462 aaPredicted RBP31.43■■■□□ 2.62
LRRTM1-204ENST00000416268 FBLN2P98095 1184 aa31.38■■■□□ 2.61
LRRTM1-204ENST00000416268 SOGA1O94964 1423 aa31.33■■■□□ 2.61
LRRTM1-204ENST00000416268 CHD1O14646 1710 aa31.32■■■□□ 2.6
LRRTM1-204ENST00000416268 RAD54L2Q9Y4B4 1467 aa31.31■■■□□ 2.6
LRRTM1-204ENST00000416268 CYB5RLQ6IPT4 315 aa31.3■■■□□ 2.6
LRRTM1-204ENST00000416268 TDRD9Q8NDG6 1382 aaKnown RBP31.27■■■□□ 2.6
LRRTM1-204ENST00000416268 FGD5Q6ZNL6 1462 aa31.22■■■□□ 2.59
LRRTM1-204ENST00000416268 WDR97A6NE52 1622 aa31.19■■■□□ 2.58
LRRTM1-204ENST00000416268 SNAPC4Q5SXM2 1469 aa31.15■■■□□ 2.58
LRRTM1-204ENST00000416268 CUX1P39880 1505 aa31.14■■■□□ 2.57
LRRTM1-204ENST00000416268 CHMP7Q8WUX9 453 aaPredicted RBP31.13■■■□□ 2.57
LRRTM1-204ENST00000416268 ARAP1Q96P48 1450 aa31.13■■■□□ 2.57
LRRTM1-204ENST00000416268 MAGI1Q96QZ7 1491 aaPredicted RBP31.08■■■□□ 2.57
LRRTM1-204ENST00000416268 GRIN2BQ13224 1484 aa31.08■■■□□ 2.57
LRRTM1-204ENST00000416268 TRHP20396 242 aaPredicted RBP31.05■■■□□ 2.56
LRRTM1-204ENST00000416268 SYNJ1O43426 1573 aa31.02■■■□□ 2.56
LRRTM1-204ENST00000416268 CLASP1Q7Z460 1538 aa30.98■■■□□ 2.55
LRRTM1-204ENST00000416268 SYNJ2O15056 1496 aa30.98■■■□□ 2.55
LRRTM1-204ENST00000416268 SUPT5HO00267 1087 aaKnown RBP30.96■■■□□ 2.55
LRRTM1-204ENST00000416268 GAPVD1Q14C86 1478 aa30.94■■■□□ 2.54
LRRTM1-204ENST00000416268 ABCA10Q8WWZ4 1543 aa30.86■■■□□ 2.53
LRRTM1-204ENST00000416268 PBRM1Q86U86 1689 aa30.86■■■□□ 2.53
LRRTM1-204ENST00000416268 ABCA5Q8WWZ7 1642 aa30.79■■■□□ 2.52
LRRTM1-204ENST00000416268 WRNQ14191 1432 aaPredicted RBP eCLIP30.76■■■□□ 2.51
LRRTM1-204ENST00000416268 GRIN2AQ12879 1464 aa30.65■■■□□ 2.5
LRRTM1-204ENST00000416268 TOP2BQ02880 1626 aa30.62■■■□□ 2.49
LRRTM1-204ENST00000416268 BIVM-ERCC5R4GMW8 1640 aa30.6■■■□□ 2.49
LRRTM1-204ENST00000416268 ADAMTS12P58397 1594 aa30.58■■■□□ 2.49
LRRTM1-204ENST00000416268 FHAD1B1AJZ9 1412 aa30.56■■■□□ 2.48
LRRTM1-204ENST00000416268 NUP160Q12769 1436 aa30.55■■■□□ 2.48
LRRTM1-204ENST00000416268 CEP170Q5SW79 1584 aa30.5■■■□□ 2.47
LRRTM1-204ENST00000416268 ERICH3Q5RHP9 1530 aa30.48■■■□□ 2.47
LRRTM1-204ENST00000416268 ERCC6L2Q5T890 1561 aa30.45■■■□□ 2.47
LRRTM1-204ENST00000416268 SHROOM2Q13796 1616 aa30.37■■■□□ 2.45
LRRTM1-204ENST00000416268 PRG4Q92954 1404 aaPredicted RBP30.3■■■□□ 2.44
LRRTM1-204ENST00000416268 AEBP2Q6ZN18 517 aaPredicted RBP30.29■■■□□ 2.44
LRRTM1-204ENST00000416268 JPH4Q96JJ6 628 aa30.28■■■□□ 2.44
LRRTM1-204ENST00000416268 RUSC2Q8N2Y8 1516 aa30.15■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms