RNA–Protein interactions for RNA: ENST00000416255.5

PDCL3-202, Transcript of phosducin like 3, humanhuman

TSL 2

Gene PDCL3, Length 657 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCL3-202ENST00000416255 NISCHQ9Y2I1 1504 aa32.24■■■□□ 2.75
PDCL3-202ENST00000416255 CCDC180Q9P1Z9 1646 aa28.7■■■□□ 2.19
PDCL3-202ENST00000416255 ABCC9O60706 1549 aa27.87■■■□□ 2.05
PDCL3-202ENST00000416255 ZCCHC6Q5VYS8 1495 aaKnown RBP26.92■■□□□ 1.9
PDCL3-202ENST00000416255 NACADO15069 1562 aa26.91■■□□□ 1.9
PDCL3-202ENST00000416255 RB1CC1Q8TDY2 1594 aa26.91■■□□□ 1.9
PDCL3-202ENST00000416255 MYO15BQ96JP2 1530 aa26.83■■□□□ 1.89
PDCL3-202ENST00000416255 DCAF1Q9Y4B6 1507 aa26.74■■□□□ 1.87
PDCL3-202ENST00000416255 DCAF8L2P0C7V8 631 aa26.65■■□□□ 1.86
PDCL3-202ENST00000416255 UNC13AQ9UPW8 1703 aa26.34■■□□□ 1.81
PDCL3-202ENST00000416255 BICRAQ9NZM4 1560 aa26.13■■□□□ 1.77
PDCL3-202ENST00000416255 SCRIBQ14160 1630 aa26.11■■□□□ 1.77
PDCL3-202ENST00000416255 PABPN1Q86U42 306 aaKnown RBP eCLIP25.98■■□□□ 1.75
PDCL3-202ENST00000416255 SHROOM4Q9ULL8 1493 aa25.91■■□□□ 1.74
PDCL3-202ENST00000416255 DNAJC5BQ9UF47 199 aa25.47■■□□□ 1.67
PDCL3-202ENST00000416255 EIF4G1Q04637 1599 aaKnown RBP25.41■■□□□ 1.66
PDCL3-202ENST00000416255 CC2D2AQ9P2K1 1620 aa25.26■■□□□ 1.63
PDCL3-202ENST00000416255 CECR2Q9BXF3 1484 aa25.09■■□□□ 1.61
PDCL3-202ENST00000416255 SMARCA4P51532 1647 aa25.02■■□□□ 1.6
PDCL3-202ENST00000416255 BAZ1AQ9NRL2 1556 aaPredicted RBP24.99■■□□□ 1.59
PDCL3-202ENST00000416255 MROH2BQ7Z745 1585 aa24.84■■□□□ 1.57
PDCL3-202ENST00000416255 ATAD2BQ9ULI0 1458 aa24.83■■□□□ 1.56
PDCL3-202ENST00000416255 SMARCA2P51531 1590 aa24.82■■□□□ 1.56
PDCL3-202ENST00000416255 PEG3Q9GZU2 1588 aa24.82■■□□□ 1.56
PDCL3-202ENST00000416255 NCAPD3P42695 1498 aa24.82■■□□□ 1.56
PDCL3-202ENST00000416255 HMGXB3Q12766 1538 aa24.75■■□□□ 1.55
PDCL3-202ENST00000416255 BAZ1BQ9UIG0 1483 aaKnown RBP24.62■■□□□ 1.53
PDCL3-202ENST00000416255 WIZO95785 1651 aa24.57■■□□□ 1.52
PDCL3-202ENST00000416255 RSF1Q96T23 1441 aaPredicted RBP24.56■■□□□ 1.52
PDCL3-202ENST00000416255 TOP2AP11388 1531 aaKnown RBP24.35■■□□□ 1.49
PDCL3-202ENST00000416255 NESP48681 1621 aa24.17■■□□□ 1.46
PDCL3-202ENST00000416255 LAMC3Q9Y6N6 1575 aa24.16■■□□□ 1.46
PDCL3-202ENST00000416255 CADPSQ9ULU8 1353 aa24.05■■□□□ 1.44
PDCL3-202ENST00000416255 CCDC88BA6NC98 1476 aa24■■□□□ 1.43
PDCL3-202ENST00000416255 ERCC6Q03468 1493 aa24■■□□□ 1.43
PDCL3-202ENST00000416255 CFTRP13569 1480 aa23.97■■□□□ 1.43
PDCL3-202ENST00000416255 KIF21AQ7Z4S6 1674 aa23.93■■□□□ 1.42
PDCL3-202ENST00000416255 PDS5BQ9NTI5 1447 aa23.93■■□□□ 1.42
PDCL3-202ENST00000416255 THOC2Q8NI27 1593 aaKnown RBP23.87■■□□□ 1.41
PDCL3-202ENST00000416255 PRDM2Q13029 1718 aa23.85■■□□□ 1.41
PDCL3-202ENST00000416255 SUPT5HO00267 1087 aaKnown RBP23.83■■□□□ 1.41
PDCL3-202ENST00000416255 CUX2O14529 1486 aa23.8■■□□□ 1.4
PDCL3-202ENST00000416255 FANCD2Q9BXW9 1451 aa23.79■■□□□ 1.4
PDCL3-202ENST00000416255 CEP164Q9UPV0 1460 aa23.76■■□□□ 1.39
PDCL3-202ENST00000416255 MRC2Q9UBG0 1479 aa23.73■■□□□ 1.39
PDCL3-202ENST00000416255 WDR62O43379 1518 aa23.69■■□□□ 1.38
PDCL3-202ENST00000416255 URB2Q14146 1524 aaKnown RBP23.58■■□□□ 1.36
PDCL3-202ENST00000416255 DNAJC5Q9H3Z4 198 aa23.57■■□□□ 1.36
PDCL3-202ENST00000416255 DNMBPQ6XZF7 1577 aa23.44■■□□□ 1.34
PDCL3-202ENST00000416255 TOPBP1Q92547 1522 aa23.44■■□□□ 1.34
PDCL3-202ENST00000416255 ABCC8Q09428 1581 aa23.43■■□□□ 1.34
PDCL3-202ENST00000416255 CUX1P39880 1505 aa23.3■■□□□ 1.32
PDCL3-202ENST00000416255 IFT140Q96RY7 1462 aa23.27■■□□□ 1.32
PDCL3-202ENST00000416255 POLA1P09884 1462 aaPredicted RBP23.25■■□□□ 1.31
PDCL3-202ENST00000416255 TARBP1Q13395 1621 aaKnown RBP23.22■■□□□ 1.31
PDCL3-202ENST00000416255 FGD5Q6ZNL6 1462 aa23.2■■□□□ 1.3
PDCL3-202ENST00000416255 BIVM-ERCC5R4GMW8 1640 aa23.16■■□□□ 1.3
PDCL3-202ENST00000416255 WRNQ14191 1432 aaPredicted RBP eCLIP23.15■■□□□ 1.3
PDCL3-202ENST00000416255 TOP2BQ02880 1626 aa23.15■■□□□ 1.3
PDCL3-202ENST00000416255 SYNJ1O43426 1573 aa23.14■■□□□ 1.3
PDCL3-202ENST00000416255 ZNF608Q9ULD9 1512 aaPredicted RBP23.14■■□□□ 1.3
PDCL3-202ENST00000416255 RAD54L2Q9Y4B4 1467 aa23.11■■□□□ 1.29
PDCL3-202ENST00000416255 EIF4G3O43432 1585 aaKnown RBP23.11■■□□□ 1.29
PDCL3-202ENST00000416255 WDR97A6NE52 1622 aa23.1■■□□□ 1.29
PDCL3-202ENST00000416255 SOGA1O94964 1423 aa23.08■■□□□ 1.29
PDCL3-202ENST00000416255 ABCA10Q8WWZ4 1543 aa23■■□□□ 1.27
PDCL3-202ENST00000416255 AQRO60306 1485 aaKnown RBP eCLIP22.99■■□□□ 1.27
PDCL3-202ENST00000416255 ABCA5Q8WWZ7 1642 aa22.94■■□□□ 1.26
PDCL3-202ENST00000416255 TDRD9Q8NDG6 1382 aaKnown RBP22.94■■□□□ 1.26
PDCL3-202ENST00000416255 PBRM1Q86U86 1689 aa22.87■■□□□ 1.25
PDCL3-202ENST00000416255 GRIN2BQ13224 1484 aa22.85■■□□□ 1.25
PDCL3-202ENST00000416255 GAPVD1Q14C86 1478 aa22.85■■□□□ 1.25
PDCL3-202ENST00000416255 SNAPC4Q5SXM2 1469 aa22.82■■□□□ 1.24
PDCL3-202ENST00000416255 MAGI1Q96QZ7 1491 aaPredicted RBP22.81■■□□□ 1.24
PDCL3-202ENST00000416255 CHD1O14646 1710 aa22.79■■□□□ 1.24
PDCL3-202ENST00000416255 ERICH3Q5RHP9 1530 aa22.72■■□□□ 1.23
PDCL3-202ENST00000416255 SYNJ2O15056 1496 aa22.72■■□□□ 1.23
PDCL3-202ENST00000416255 ADAMTS12P58397 1594 aa22.71■■□□□ 1.23
PDCL3-202ENST00000416255 OSCARQ8IYS5 282 aa22.69■■□□□ 1.22
PDCL3-202ENST00000416255 KIF27Q86VH2 1401 aa22.64■■□□□ 1.21
PDCL3-202ENST00000416255 FHAD1B1AJZ9 1412 aa22.6■■□□□ 1.21
PDCL3-202ENST00000416255 GRIN2AQ12879 1464 aa22.59■■□□□ 1.21
PDCL3-202ENST00000416255 CLASP1Q7Z460 1538 aa22.58■■□□□ 1.21
PDCL3-202ENST00000416255 FBLN2P98095 1184 aa22.58■■□□□ 1.21
PDCL3-202ENST00000416255 CHMP7Q8WUX9 453 aaPredicted RBP22.57■■□□□ 1.2
PDCL3-202ENST00000416255 CUL7Q14999 1698 aa22.55■■□□□ 1.2
PDCL3-202ENST00000416255 TRIM41Q8WV44 630 aa22.53■■□□□ 1.2
PDCL3-202ENST00000416255 IGF1RP08069 1367 aa22.52■■□□□ 1.2
PDCL3-202ENST00000416255 CEP170Q5SW79 1584 aa22.5■■□□□ 1.19
PDCL3-202ENST00000416255 NUP160Q12769 1436 aa22.49■■□□□ 1.19
PDCL3-202ENST00000416255 RUSC2Q8N2Y8 1516 aa22.47■■□□□ 1.19
PDCL3-202ENST00000416255 ARHGEF11O15085 1522 aa22.45■■□□□ 1.18
PDCL3-202ENST00000416255 RIMBP3CA6NJZ7 1639 aa22.44■■□□□ 1.18
PDCL3-202ENST00000416255 RIMBP3BA6NNM3 1639 aa22.44■■□□□ 1.18
PDCL3-202ENST00000416255 RIMBP3Q9UFD9 1639 aa22.44■■□□□ 1.18
PDCL3-202ENST00000416255 CARMIL1Q5VZK9 1371 aa22.38■■□□□ 1.17
PDCL3-202ENST00000416255 SHROOM2Q13796 1616 aa22.36■■□□□ 1.17
PDCL3-202ENST00000416255 CHIC1Q5VXU3 224 aa22.35■■□□□ 1.17
PDCL3-202ENST00000416255 RAPGEF2Q9Y4G8 1499 aa22.29■■□□□ 1.16
PDCL3-202ENST00000416255 EEA1Q15075 1411 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms