RNA–Protein interactions for RNA: ENST00000416248.5

HDAC11-208, Transcript of histone deacetylase 11, humanhuman

TSL 4

Gene HDAC11, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-208ENST00000416248 NISCHQ9Y2I1 1504 aa48.53■■■■■ 5.36
HDAC11-208ENST00000416248 ABCC9O60706 1549 aa44.1■■■■■ 4.65
HDAC11-208ENST00000416248 CCDC180Q9P1Z9 1646 aa43.77■■■■■ 4.6
HDAC11-208ENST00000416248 RB1CC1Q8TDY2 1594 aa41.84■■■■■ 4.29
HDAC11-208ENST00000416248 DNAJC5BQ9UF47 199 aa41.72■■■■■ 4.27
HDAC11-208ENST00000416248 NACADO15069 1562 aa41.46■■■■■ 4.23
HDAC11-208ENST00000416248 DCAF8L2P0C7V8 631 aa41.06■■■■■ 4.16
HDAC11-208ENST00000416248 PABPN1Q86U42 306 aaKnown RBP eCLIP40.96■■■■■ 4.15
HDAC11-208ENST00000416248 UNC13AQ9UPW8 1703 aa40.93■■■■■ 4.14
HDAC11-208ENST00000416248 MYO15BQ96JP2 1530 aa40.77■■■■■ 4.12
HDAC11-208ENST00000416248 BICRAQ9NZM4 1560 aa40.64■■■■■ 4.1
HDAC11-208ENST00000416248 ZCCHC6Q5VYS8 1495 aaKnown RBP40.14■■■■■ 4.02
HDAC11-208ENST00000416248 DCAF1Q9Y4B6 1507 aa40.09■■■■■ 4.01
HDAC11-208ENST00000416248 SHROOM4Q9ULL8 1493 aa40.07■■■■■ 4.01
HDAC11-208ENST00000416248 CC2D2AQ9P2K1 1620 aa39.85■■■■□ 3.97
HDAC11-208ENST00000416248 SCRIBQ14160 1630 aa39.82■■■■□ 3.96
HDAC11-208ENST00000416248 CECR2Q9BXF3 1484 aa39.79■■■■□ 3.96
HDAC11-208ENST00000416248 EIF4G1Q04637 1599 aaKnown RBP39.67■■■■□ 3.94
HDAC11-208ENST00000416248 DNAJC5Q9H3Z4 198 aa38.62■■■■□ 3.77
HDAC11-208ENST00000416248 NCAPD3P42695 1498 aa38.27■■■■□ 3.72
HDAC11-208ENST00000416248 CUX2O14529 1486 aa38.21■■■■□ 3.71
HDAC11-208ENST00000416248 ERCC6Q03468 1493 aa38.11■■■■□ 3.69
HDAC11-208ENST00000416248 ATAD2BQ9ULI0 1458 aa38.09■■■■□ 3.69
HDAC11-208ENST00000416248 SMARCA2P51531 1590 aa37.97■■■■□ 3.67
HDAC11-208ENST00000416248 HMGXB3Q12766 1538 aa37.97■■■■□ 3.67
HDAC11-208ENST00000416248 SMARCA4P51532 1647 aa37.96■■■■□ 3.67
HDAC11-208ENST00000416248 NESP48681 1621 aa37.78■■■■□ 3.64
HDAC11-208ENST00000416248 BAZ1AQ9NRL2 1556 aaPredicted RBP37.71■■■■□ 3.63
HDAC11-208ENST00000416248 BAZ1BQ9UIG0 1483 aaKnown RBP37.7■■■■□ 3.63
HDAC11-208ENST00000416248 PEG3Q9GZU2 1588 aa37.61■■■■□ 3.61
HDAC11-208ENST00000416248 THOC2Q8NI27 1593 aaKnown RBP37.51■■■■□ 3.6
HDAC11-208ENST00000416248 LAMC3Q9Y6N6 1575 aa37.48■■■■□ 3.59
HDAC11-208ENST00000416248 MROH2BQ7Z745 1585 aa37.38■■■■□ 3.58
HDAC11-208ENST00000416248 KIF21AQ7Z4S6 1674 aa37.31■■■■□ 3.56
HDAC11-208ENST00000416248 PDS5BQ9NTI5 1447 aa37.26■■■■□ 3.55
HDAC11-208ENST00000416248 CADPSQ9ULU8 1353 aa37.06■■■■□ 3.52
HDAC11-208ENST00000416248 MRC2Q9UBG0 1479 aa36.96■■■■□ 3.51
HDAC11-208ENST00000416248 WIZO95785 1651 aa36.93■■■■□ 3.5
HDAC11-208ENST00000416248 WDR62O43379 1518 aa36.9■■■■□ 3.5
HDAC11-208ENST00000416248 CEP164Q9UPV0 1460 aa36.74■■■■□ 3.47
HDAC11-208ENST00000416248 TRIM41Q8WV44 630 aa36.72■■■■□ 3.47
HDAC11-208ENST00000416248 FANCD2Q9BXW9 1451 aa36.65■■■■□ 3.46
HDAC11-208ENST00000416248 CFTRP13569 1480 aa36.57■■■■□ 3.45
HDAC11-208ENST00000416248 RSF1Q96T23 1441 aaPredicted RBP36.46■■■■□ 3.43
HDAC11-208ENST00000416248 TOP2AP11388 1531 aaKnown RBP36.44■■■■□ 3.42
HDAC11-208ENST00000416248 URB2Q14146 1524 aaKnown RBP36.39■■■■□ 3.42
HDAC11-208ENST00000416248 OSCARQ8IYS5 282 aa36.36■■■■□ 3.41
HDAC11-208ENST00000416248 PRDM2Q13029 1718 aa36.23■■■■□ 3.39
HDAC11-208ENST00000416248 IFT140Q96RY7 1462 aa36.02■■■■□ 3.36
HDAC11-208ENST00000416248 CCDC88BA6NC98 1476 aa36.01■■■■□ 3.36
HDAC11-208ENST00000416248 ZNF608Q9ULD9 1512 aaPredicted RBP35.99■■■■□ 3.35
HDAC11-208ENST00000416248 RIMBP3CA6NJZ7 1639 aa35.97■■■■□ 3.35
HDAC11-208ENST00000416248 RIMBP3BA6NNM3 1639 aa35.97■■■■□ 3.35
HDAC11-208ENST00000416248 RIMBP3Q9UFD9 1639 aa35.97■■■■□ 3.35
HDAC11-208ENST00000416248 TOPBP1Q92547 1522 aa35.93■■■■□ 3.34
HDAC11-208ENST00000416248 ABCC8Q09428 1581 aa35.82■■■■□ 3.32
HDAC11-208ENST00000416248 ARHGEF11O15085 1522 aa35.81■■■■□ 3.32
HDAC11-208ENST00000416248 EIF4G3O43432 1585 aaKnown RBP35.8■■■■□ 3.32
HDAC11-208ENST00000416248 DNMBPQ6XZF7 1577 aa35.76■■■■□ 3.32
HDAC11-208ENST00000416248 TARBP1Q13395 1621 aaKnown RBP35.65■■■■□ 3.3
HDAC11-208ENST00000416248 CHD1O14646 1710 aa35.62■■■■□ 3.29
HDAC11-208ENST00000416248 AQRO60306 1485 aaKnown RBP eCLIP35.6■■■■□ 3.29
HDAC11-208ENST00000416248 POLA1P09884 1462 aaPredicted RBP35.53■■■■□ 3.28
HDAC11-208ENST00000416248 CYB5RLQ6IPT4 315 aa35.52■■■■□ 3.28
HDAC11-208ENST00000416248 FBLN2P98095 1184 aa35.43■■■■□ 3.26
HDAC11-208ENST00000416248 ARAP1Q96P48 1450 aa35.42■■■■□ 3.26
HDAC11-208ENST00000416248 RAD54L2Q9Y4B4 1467 aa35.39■■■■□ 3.26
HDAC11-208ENST00000416248 SOGA1O94964 1423 aa35.33■■■■□ 3.25
HDAC11-208ENST00000416248 TDRD9Q8NDG6 1382 aaKnown RBP35.32■■■■□ 3.24
HDAC11-208ENST00000416248 WDR97A6NE52 1622 aa35.28■■■■□ 3.24
HDAC11-208ENST00000416248 TRHP20396 242 aaPredicted RBP35.25■■■■□ 3.23
HDAC11-208ENST00000416248 SNAPC4Q5SXM2 1469 aa35.24■■■■□ 3.23
HDAC11-208ENST00000416248 FGD5Q6ZNL6 1462 aa35.24■■■■□ 3.23
HDAC11-208ENST00000416248 CLASP1Q7Z460 1538 aa35.19■■■■□ 3.22
HDAC11-208ENST00000416248 CUX1P39880 1505 aa35.16■■■■□ 3.22
HDAC11-208ENST00000416248 MAGI1Q96QZ7 1491 aaPredicted RBP35.16■■■■□ 3.22
HDAC11-208ENST00000416248 SYNJ1O43426 1573 aa35.13■■■■□ 3.21
HDAC11-208ENST00000416248 CHMP7Q8WUX9 453 aaPredicted RBP35.11■■■■□ 3.21
HDAC11-208ENST00000416248 GRIN2BQ13224 1484 aa35.09■■■■□ 3.21
HDAC11-208ENST00000416248 SYNJ2O15056 1496 aa35.03■■■■□ 3.2
HDAC11-208ENST00000416248 PBRM1Q86U86 1689 aa34.96■■■■□ 3.19
HDAC11-208ENST00000416248 GAPVD1Q14C86 1478 aa34.91■■■■□ 3.18
HDAC11-208ENST00000416248 ABCA5Q8WWZ7 1642 aa34.84■■■■□ 3.17
HDAC11-208ENST00000416248 ABCA10Q8WWZ4 1543 aa34.83■■■■□ 3.17
HDAC11-208ENST00000416248 GRIN2AQ12879 1464 aa34.65■■■■□ 3.14
HDAC11-208ENST00000416248 WRNQ14191 1432 aaPredicted RBP eCLIP34.6■■■■□ 3.13
HDAC11-208ENST00000416248 ADAMTS12P58397 1594 aa34.6■■■■□ 3.13
HDAC11-208ENST00000416248 ERCC6L2Q5T890 1561 aa34.6■■■■□ 3.13
HDAC11-208ENST00000416248 NUP160Q12769 1436 aa34.55■■■■□ 3.12
HDAC11-208ENST00000416248 CEP170Q5SW79 1584 aa34.55■■■■□ 3.12
HDAC11-208ENST00000416248 AEBP2Q6ZN18 517 aaPredicted RBP34.52■■■■□ 3.12
HDAC11-208ENST00000416248 BIVM-ERCC5R4GMW8 1640 aa34.51■■■■□ 3.11
HDAC11-208ENST00000416248 TOP2BQ02880 1626 aa34.5■■■■□ 3.11
HDAC11-208ENST00000416248 SUPT5HO00267 1087 aaKnown RBP34.49■■■■□ 3.11
HDAC11-208ENST00000416248 SHROOM2Q13796 1616 aa34.48■■■■□ 3.11
HDAC11-208ENST00000416248 FHAD1B1AJZ9 1412 aa34.46■■■■□ 3.11
HDAC11-208ENST00000416248 ERICH3Q5RHP9 1530 aa34.4■■■■□ 3.1
HDAC11-208ENST00000416248 KIF13AQ9H1H9 1805 aa34.23■■■■□ 3.07
HDAC11-208ENST00000416248 PRG4Q92954 1404 aaPredicted RBP34.23■■■■□ 3.07
HDAC11-208ENST00000416248 JPH4Q96JJ6 628 aa34.16■■■■□ 3.06
Retrieved 100 of 20,778 RNA–protein pairs in 142.9 ms