RNA–Protein interactions for RNA: ENST00000416236.5

SEMA4F-203, Transcript of ssemaphorin 4F, humanhuman

TSL 4

Gene SEMA4F, Length 531 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4F-203ENST00000416236 NISCHQ9Y2I1 1504 aa36.97■■■■□ 3.51
SEMA4F-203ENST00000416236 CCDC180Q9P1Z9 1646 aa32.9■■■□□ 2.86
SEMA4F-203ENST00000416236 ABCC9O60706 1549 aa32.75■■■□□ 2.83
SEMA4F-203ENST00000416236 RB1CC1Q8TDY2 1594 aa31.22■■■□□ 2.59
SEMA4F-203ENST00000416236 DCAF8L2P0C7V8 631 aa31.21■■■□□ 2.59
SEMA4F-203ENST00000416236 NACADO15069 1562 aa31.09■■■□□ 2.57
SEMA4F-203ENST00000416236 MYO15BQ96JP2 1530 aa30.75■■■□□ 2.51
SEMA4F-203ENST00000416236 ZCCHC6Q5VYS8 1495 aaKnown RBP30.69■■■□□ 2.5
SEMA4F-203ENST00000416236 PABPN1Q86U42 306 aaKnown RBP eCLIP30.63■■■□□ 2.49
SEMA4F-203ENST00000416236 DNAJC5BQ9UF47 199 aa30.51■■■□□ 2.47
SEMA4F-203ENST00000416236 DCAF1Q9Y4B6 1507 aa30.5■■■□□ 2.47
SEMA4F-203ENST00000416236 UNC13AQ9UPW8 1703 aa30.47■■■□□ 2.47
SEMA4F-203ENST00000416236 BICRAQ9NZM4 1560 aa30.34■■■□□ 2.45
SEMA4F-203ENST00000416236 SCRIBQ14160 1630 aa30.11■■■□□ 2.41
SEMA4F-203ENST00000416236 SHROOM4Q9ULL8 1493 aa29.87■■■□□ 2.37
SEMA4F-203ENST00000416236 EIF4G1Q04637 1599 aaKnown RBP29.56■■■□□ 2.32
SEMA4F-203ENST00000416236 CC2D2AQ9P2K1 1620 aa29.53■■■□□ 2.32
SEMA4F-203ENST00000416236 CECR2Q9BXF3 1484 aa29.44■■■□□ 2.3
SEMA4F-203ENST00000416236 NCAPD3P42695 1498 aa28.75■■■□□ 2.19
SEMA4F-203ENST00000416236 SMARCA4P51532 1647 aa28.72■■■□□ 2.19
SEMA4F-203ENST00000416236 ATAD2BQ9ULI0 1458 aa28.72■■■□□ 2.19
SEMA4F-203ENST00000416236 BAZ1AQ9NRL2 1556 aaPredicted RBP28.64■■■□□ 2.18
SEMA4F-203ENST00000416236 SMARCA2P51531 1590 aa28.6■■■□□ 2.17
SEMA4F-203ENST00000416236 MROH2BQ7Z745 1585 aa28.52■■■□□ 2.16
SEMA4F-203ENST00000416236 HMGXB3Q12766 1538 aa28.5■■■□□ 2.15
SEMA4F-203ENST00000416236 BAZ1BQ9UIG0 1483 aaKnown RBP28.44■■■□□ 2.14
SEMA4F-203ENST00000416236 PEG3Q9GZU2 1588 aa28.42■■■□□ 2.14
SEMA4F-203ENST00000416236 NESP48681 1621 aa28.24■■■□□ 2.11
SEMA4F-203ENST00000416236 ERCC6Q03468 1493 aa28.21■■■□□ 2.11
SEMA4F-203ENST00000416236 WIZO95785 1651 aa28.16■■■□□ 2.1
SEMA4F-203ENST00000416236 RSF1Q96T23 1441 aaPredicted RBP28.07■■■□□ 2.08
SEMA4F-203ENST00000416236 CUX2O14529 1486 aa28■■■□□ 2.07
SEMA4F-203ENST00000416236 LAMC3Q9Y6N6 1575 aa27.99■■■□□ 2.07
SEMA4F-203ENST00000416236 CADPSQ9ULU8 1353 aa27.92■■■□□ 2.06
SEMA4F-203ENST00000416236 PDS5BQ9NTI5 1447 aa27.87■■■□□ 2.05
SEMA4F-203ENST00000416236 TOP2AP11388 1531 aaKnown RBP27.81■■■□□ 2.04
SEMA4F-203ENST00000416236 THOC2Q8NI27 1593 aaKnown RBP27.78■■■□□ 2.04
SEMA4F-203ENST00000416236 KIF21AQ7Z4S6 1674 aa27.78■■■□□ 2.04
SEMA4F-203ENST00000416236 DNAJC5Q9H3Z4 198 aa27.7■■■□□ 2.02
SEMA4F-203ENST00000416236 CFTRP13569 1480 aa27.64■■■□□ 2.02
SEMA4F-203ENST00000416236 MRC2Q9UBG0 1479 aa27.6■■■□□ 2.01
SEMA4F-203ENST00000416236 FANCD2Q9BXW9 1451 aa27.58■■■□□ 2.01
SEMA4F-203ENST00000416236 CCDC88BA6NC98 1476 aa27.56■■■□□ 2
SEMA4F-203ENST00000416236 CEP164Q9UPV0 1460 aa27.56■■■□□ 2
SEMA4F-203ENST00000416236 WDR62O43379 1518 aa27.49■■□□□ 1.99
SEMA4F-203ENST00000416236 URB2Q14146 1524 aaKnown RBP27.35■■□□□ 1.97
SEMA4F-203ENST00000416236 PRDM2Q13029 1718 aa27.24■■□□□ 1.95
SEMA4F-203ENST00000416236 SUPT5HO00267 1087 aaKnown RBP27.18■■□□□ 1.94
SEMA4F-203ENST00000416236 TOPBP1Q92547 1522 aa27.09■■□□□ 1.93
SEMA4F-203ENST00000416236 ABCC8Q09428 1581 aa27.01■■□□□ 1.92
SEMA4F-203ENST00000416236 IFT140Q96RY7 1462 aa27■■□□□ 1.91
SEMA4F-203ENST00000416236 DNMBPQ6XZF7 1577 aa26.98■■□□□ 1.91
SEMA4F-203ENST00000416236 ZNF608Q9ULD9 1512 aaPredicted RBP26.98■■□□□ 1.91
SEMA4F-203ENST00000416236 OSCARQ8IYS5 282 aa26.88■■□□□ 1.89
SEMA4F-203ENST00000416236 POLA1P09884 1462 aaPredicted RBP26.84■■□□□ 1.89
SEMA4F-203ENST00000416236 AQRO60306 1485 aaKnown RBP eCLIP26.8■■□□□ 1.88
SEMA4F-203ENST00000416236 TARBP1Q13395 1621 aaKnown RBP26.79■■□□□ 1.88
SEMA4F-203ENST00000416236 RAD54L2Q9Y4B4 1467 aa26.79■■□□□ 1.88
SEMA4F-203ENST00000416236 EIF4G3O43432 1585 aaKnown RBP26.76■■□□□ 1.87
SEMA4F-203ENST00000416236 CUX1P39880 1505 aa26.76■■□□□ 1.87
SEMA4F-203ENST00000416236 SOGA1O94964 1423 aa26.76■■□□□ 1.87
SEMA4F-203ENST00000416236 FGD5Q6ZNL6 1462 aa26.73■■□□□ 1.87
SEMA4F-203ENST00000416236 TDRD9Q8NDG6 1382 aaKnown RBP26.71■■□□□ 1.87
SEMA4F-203ENST00000416236 TRIM41Q8WV44 630 aa26.67■■□□□ 1.86
SEMA4F-203ENST00000416236 FBLN2P98095 1184 aa26.59■■□□□ 1.85
SEMA4F-203ENST00000416236 SNAPC4Q5SXM2 1469 aa26.49■■□□□ 1.83
SEMA4F-203ENST00000416236 CHD1O14646 1710 aa26.47■■□□□ 1.83
SEMA4F-203ENST00000416236 WDR97A6NE52 1622 aa26.47■■□□□ 1.83
SEMA4F-203ENST00000416236 GRIN2BQ13224 1484 aa26.45■■□□□ 1.82
SEMA4F-203ENST00000416236 WRNQ14191 1432 aaPredicted RBP eCLIP26.45■■□□□ 1.82
SEMA4F-203ENST00000416236 ABCA10Q8WWZ4 1543 aa26.43■■□□□ 1.82
SEMA4F-203ENST00000416236 CHMP7Q8WUX9 453 aaPredicted RBP26.42■■□□□ 1.82
SEMA4F-203ENST00000416236 GAPVD1Q14C86 1478 aa26.42■■□□□ 1.82
SEMA4F-203ENST00000416236 RIMBP3CA6NJZ7 1639 aa26.41■■□□□ 1.82
SEMA4F-203ENST00000416236 RIMBP3BA6NNM3 1639 aa26.41■■□□□ 1.82
SEMA4F-203ENST00000416236 RIMBP3Q9UFD9 1639 aa26.41■■□□□ 1.82
SEMA4F-203ENST00000416236 SYNJ1O43426 1573 aa26.39■■□□□ 1.82
SEMA4F-203ENST00000416236 MAGI1Q96QZ7 1491 aaPredicted RBP26.38■■□□□ 1.81
SEMA4F-203ENST00000416236 TOP2BQ02880 1626 aa26.38■■□□□ 1.81
SEMA4F-203ENST00000416236 ARHGEF11O15085 1522 aa26.38■■□□□ 1.81
SEMA4F-203ENST00000416236 BIVM-ERCC5R4GMW8 1640 aa26.35■■□□□ 1.81
SEMA4F-203ENST00000416236 ABCA5Q8WWZ7 1642 aa26.32■■□□□ 1.8
SEMA4F-203ENST00000416236 SYNJ2O15056 1496 aa26.31■■□□□ 1.8
SEMA4F-203ENST00000416236 PBRM1Q86U86 1689 aa26.28■■□□□ 1.8
SEMA4F-203ENST00000416236 CYB5RLQ6IPT4 315 aa26.27■■□□□ 1.8
SEMA4F-203ENST00000416236 CLASP1Q7Z460 1538 aa26.21■■□□□ 1.79
SEMA4F-203ENST00000416236 ARAP1Q96P48 1450 aa26.17■■□□□ 1.78
SEMA4F-203ENST00000416236 GRIN2AQ12879 1464 aa26.11■■□□□ 1.77
SEMA4F-203ENST00000416236 ADAMTS12P58397 1594 aa26.1■■□□□ 1.77
SEMA4F-203ENST00000416236 FHAD1B1AJZ9 1412 aa26.09■■□□□ 1.77
SEMA4F-203ENST00000416236 ERICH3Q5RHP9 1530 aa26.07■■□□□ 1.76
SEMA4F-203ENST00000416236 NUP160Q12769 1436 aa26■■□□□ 1.75
SEMA4F-203ENST00000416236 CEP170Q5SW79 1584 aa25.99■■□□□ 1.75
SEMA4F-203ENST00000416236 IGF1RP08069 1367 aa25.93■■□□□ 1.74
SEMA4F-203ENST00000416236 KIF27Q86VH2 1401 aa25.92■■□□□ 1.74
SEMA4F-203ENST00000416236 ERCC6L2Q5T890 1561 aa25.9■■□□□ 1.74
SEMA4F-203ENST00000416236 TRHP20396 242 aaPredicted RBP25.86■■□□□ 1.73
SEMA4F-203ENST00000416236 JPH4Q96JJ6 628 aa25.82■■□□□ 1.72
SEMA4F-203ENST00000416236 SHROOM2Q13796 1616 aa25.8■■□□□ 1.72
SEMA4F-203ENST00000416236 PRG4Q92954 1404 aaPredicted RBP25.77■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms