RNA–Protein interactions for RNA: ENST00000416093.1

RAF1-202, Transcript of Raf-1 proto-oncogene, serine/threonine kinase, humanhuman

TSL 2

Gene RAF1, Length 962 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAF1-202ENST00000416093 NISCHQ9Y2I1 1504 aa36.64■■■■□ 3.46
RAF1-202ENST00000416093 CCDC180Q9P1Z9 1646 aa32.7■■■□□ 2.83
RAF1-202ENST00000416093 ABCC9O60706 1549 aa32.61■■■□□ 2.81
RAF1-202ENST00000416093 RB1CC1Q8TDY2 1594 aa31.06■■■□□ 2.56
RAF1-202ENST00000416093 DCAF8L2P0C7V8 631 aa30.94■■■□□ 2.54
RAF1-202ENST00000416093 NACADO15069 1562 aa30.91■■■□□ 2.54
RAF1-202ENST00000416093 MYO15BQ96JP2 1530 aa30.53■■■□□ 2.48
RAF1-202ENST00000416093 DNAJC5BQ9UF47 199 aa30.48■■■□□ 2.47
RAF1-202ENST00000416093 PABPN1Q86U42 306 aaKnown RBP eCLIP30.46■■■□□ 2.47
RAF1-202ENST00000416093 ZCCHC6Q5VYS8 1495 aaKnown RBP30.39■■■□□ 2.46
RAF1-202ENST00000416093 UNC13AQ9UPW8 1703 aa30.36■■■□□ 2.45
RAF1-202ENST00000416093 DCAF1Q9Y4B6 1507 aa30.23■■■□□ 2.43
RAF1-202ENST00000416093 BICRAQ9NZM4 1560 aa30.2■■■□□ 2.42
RAF1-202ENST00000416093 SCRIBQ14160 1630 aa29.89■■■□□ 2.37
RAF1-202ENST00000416093 SHROOM4Q9ULL8 1493 aa29.72■■■□□ 2.35
RAF1-202ENST00000416093 CC2D2AQ9P2K1 1620 aa29.43■■■□□ 2.3
RAF1-202ENST00000416093 EIF4G1Q04637 1599 aaKnown RBP29.41■■■□□ 2.3
RAF1-202ENST00000416093 CECR2Q9BXF3 1484 aa29.33■■■□□ 2.29
RAF1-202ENST00000416093 NCAPD3P42695 1498 aa28.56■■■□□ 2.16
RAF1-202ENST00000416093 ATAD2BQ9ULI0 1458 aa28.52■■■□□ 2.16
RAF1-202ENST00000416093 SMARCA4P51532 1647 aa28.51■■■□□ 2.15
RAF1-202ENST00000416093 SMARCA2P51531 1590 aa28.41■■■□□ 2.14
RAF1-202ENST00000416093 BAZ1AQ9NRL2 1556 aaPredicted RBP28.39■■■□□ 2.14
RAF1-202ENST00000416093 HMGXB3Q12766 1538 aa28.33■■■□□ 2.13
RAF1-202ENST00000416093 MROH2BQ7Z745 1585 aa28.26■■■□□ 2.11
RAF1-202ENST00000416093 BAZ1BQ9UIG0 1483 aaKnown RBP28.23■■■□□ 2.11
RAF1-202ENST00000416093 PEG3Q9GZU2 1588 aa28.21■■■□□ 2.11
RAF1-202ENST00000416093 ERCC6Q03468 1493 aa28.1■■■□□ 2.09
RAF1-202ENST00000416093 NESP48681 1621 aa28.09■■■□□ 2.09
RAF1-202ENST00000416093 CUX2O14529 1486 aa27.95■■■□□ 2.07
RAF1-202ENST00000416093 WIZO95785 1651 aa27.92■■■□□ 2.06
RAF1-202ENST00000416093 LAMC3Q9Y6N6 1575 aa27.85■■■□□ 2.05
RAF1-202ENST00000416093 DNAJC5Q9H3Z4 198 aa27.78■■■□□ 2.04
RAF1-202ENST00000416093 RSF1Q96T23 1441 aaPredicted RBP27.76■■■□□ 2.04
RAF1-202ENST00000416093 CADPSQ9ULU8 1353 aa27.73■■■□□ 2.03
RAF1-202ENST00000416093 PDS5BQ9NTI5 1447 aa27.71■■■□□ 2.03
RAF1-202ENST00000416093 THOC2Q8NI27 1593 aaKnown RBP27.69■■■□□ 2.02
RAF1-202ENST00000416093 KIF21AQ7Z4S6 1674 aa27.67■■■□□ 2.02
RAF1-202ENST00000416093 TOP2AP11388 1531 aaKnown RBP27.55■■■□□ 2
RAF1-202ENST00000416093 MRC2Q9UBG0 1479 aa27.45■■□□□ 1.99
RAF1-202ENST00000416093 CFTRP13569 1480 aa27.44■■□□□ 1.98
RAF1-202ENST00000416093 FANCD2Q9BXW9 1451 aa27.39■■□□□ 1.98
RAF1-202ENST00000416093 CEP164Q9UPV0 1460 aa27.38■■□□□ 1.97
RAF1-202ENST00000416093 WDR62O43379 1518 aa27.36■■□□□ 1.97
RAF1-202ENST00000416093 CCDC88BA6NC98 1476 aa27.29■■□□□ 1.96
RAF1-202ENST00000416093 URB2Q14146 1524 aaKnown RBP27.17■■□□□ 1.94
RAF1-202ENST00000416093 PRDM2Q13029 1718 aa27.1■■□□□ 1.93
RAF1-202ENST00000416093 TOPBP1Q92547 1522 aa26.9■■□□□ 1.9
RAF1-202ENST00000416093 SUPT5HO00267 1087 aaKnown RBP26.84■■□□□ 1.89
RAF1-202ENST00000416093 IFT140Q96RY7 1462 aa26.84■■□□□ 1.89
RAF1-202ENST00000416093 ABCC8Q09428 1581 aa26.82■■□□□ 1.88
RAF1-202ENST00000416093 ZNF608Q9ULD9 1512 aaPredicted RBP26.81■■□□□ 1.88
RAF1-202ENST00000416093 DNMBPQ6XZF7 1577 aa26.8■■□□□ 1.88
RAF1-202ENST00000416093 OSCARQ8IYS5 282 aa26.79■■□□□ 1.88
RAF1-202ENST00000416093 TRIM41Q8WV44 630 aa26.68■■□□□ 1.86
RAF1-202ENST00000416093 POLA1P09884 1462 aaPredicted RBP26.64■■□□□ 1.86
RAF1-202ENST00000416093 TARBP1Q13395 1621 aaKnown RBP26.63■■□□□ 1.85
RAF1-202ENST00000416093 AQRO60306 1485 aaKnown RBP eCLIP26.62■■□□□ 1.852e-9■■■■■ 31.6
RAF1-202ENST00000416093 EIF4G3O43432 1585 aaKnown RBP26.61■■□□□ 1.85
RAF1-202ENST00000416093 RAD54L2Q9Y4B4 1467 aa26.58■■□□□ 1.85
RAF1-202ENST00000416093 SOGA1O94964 1423 aa26.56■■□□□ 1.84
RAF1-202ENST00000416093 CUX1P39880 1505 aa26.53■■□□□ 1.84
RAF1-202ENST00000416093 FGD5Q6ZNL6 1462 aa26.51■■□□□ 1.83
RAF1-202ENST00000416093 TDRD9Q8NDG6 1382 aaKnown RBP26.49■■□□□ 1.83
RAF1-202ENST00000416093 FBLN2P98095 1184 aa26.42■■□□□ 1.82
RAF1-202ENST00000416093 CHD1O14646 1710 aa26.38■■□□□ 1.81
RAF1-202ENST00000416093 RIMBP3CA6NJZ7 1639 aa26.37■■□□□ 1.81
RAF1-202ENST00000416093 RIMBP3BA6NNM3 1639 aa26.37■■□□□ 1.81
RAF1-202ENST00000416093 RIMBP3Q9UFD9 1639 aa26.37■■□□□ 1.81
RAF1-202ENST00000416093 SNAPC4Q5SXM2 1469 aa26.31■■□□□ 1.8
RAF1-202ENST00000416093 WDR97A6NE52 1622 aa26.31■■□□□ 1.8
RAF1-202ENST00000416093 ARHGEF11O15085 1522 aa26.3■■□□□ 1.8
RAF1-202ENST00000416093 GRIN2BQ13224 1484 aa26.26■■□□□ 1.79
RAF1-202ENST00000416093 CHMP7Q8WUX9 453 aaPredicted RBP26.24■■□□□ 1.79
RAF1-202ENST00000416093 MAGI1Q96QZ7 1491 aaPredicted RBP26.22■■□□□ 1.79
RAF1-202ENST00000416093 ABCA10Q8WWZ4 1543 aa26.21■■□□□ 1.79
RAF1-202ENST00000416093 GAPVD1Q14C86 1478 aa26.21■■□□□ 1.79
RAF1-202ENST00000416093 CYB5RLQ6IPT4 315 aa26.18■■□□□ 1.78
RAF1-202ENST00000416093 WRNQ14191 1432 aaPredicted RBP eCLIP26.16■■□□□ 1.78
RAF1-202ENST00000416093 SYNJ2O15056 1496 aa26.14■■□□□ 1.78
RAF1-202ENST00000416093 PBRM1Q86U86 1689 aa26.14■■□□□ 1.78
RAF1-202ENST00000416093 TOP2BQ02880 1626 aa26.13■■□□□ 1.77
RAF1-202ENST00000416093 SYNJ1O43426 1573 aa26.12■■□□□ 1.77
RAF1-202ENST00000416093 ABCA5Q8WWZ7 1642 aa26.12■■□□□ 1.77
RAF1-202ENST00000416093 BIVM-ERCC5R4GMW8 1640 aa26.11■■□□□ 1.77
RAF1-202ENST00000416093 CLASP1Q7Z460 1538 aa26.09■■□□□ 1.77
RAF1-202ENST00000416093 ARAP1Q96P48 1450 aa26.09■■□□□ 1.77
RAF1-202ENST00000416093 GRIN2AQ12879 1464 aa25.92■■□□□ 1.74
RAF1-202ENST00000416093 ADAMTS12P58397 1594 aa25.91■■□□□ 1.74
RAF1-202ENST00000416093 FHAD1B1AJZ9 1412 aa25.88■■□□□ 1.73
RAF1-202ENST00000416093 ERICH3Q5RHP9 1530 aa25.86■■□□□ 1.73
RAF1-202ENST00000416093 NUP160Q12769 1436 aa25.83■■□□□ 1.73
RAF1-202ENST00000416093 CEP170Q5SW79 1584 aa25.82■■□□□ 1.72
RAF1-202ENST00000416093 TRHP20396 242 aaPredicted RBP25.81■■□□□ 1.72
RAF1-202ENST00000416093 ERCC6L2Q5T890 1561 aa25.76■■□□□ 1.71
RAF1-202ENST00000416093 SHROOM2Q13796 1616 aa25.66■■□□□ 1.7
RAF1-202ENST00000416093 IGF1RP08069 1367 aa25.66■■□□□ 1.7
RAF1-202ENST00000416093 KIF27Q86VH2 1401 aa25.64■■□□□ 1.7
RAF1-202ENST00000416093 JPH4Q96JJ6 628 aa25.63■■□□□ 1.69
RAF1-202ENST00000416093 PRG4Q92954 1404 aaPredicted RBP25.59■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms