RNA–Protein interactions for RNA: ENST00000416018.5

FLOT1-203, Transcript of flotillin 1, humanhuman

TSL 3

Gene FLOT1, Length 592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FLOT1-203ENST00000416018 NISCHQ9Y2I1 1504 aa28.9■■■□□ 2.22
FLOT1-203ENST00000416018 ABCC9O60706 1549 aa26.14■■□□□ 1.77
FLOT1-203ENST00000416018 CCDC180Q9P1Z9 1646 aa26.01■■□□□ 1.75
FLOT1-203ENST00000416018 RB1CC1Q8TDY2 1594 aa24.76■■□□□ 1.55
FLOT1-203ENST00000416018 NACADO15069 1562 aa24.52■■□□□ 1.52
FLOT1-203ENST00000416018 DCAF8L2P0C7V8 631 aa24.51■■□□□ 1.51
FLOT1-203ENST00000416018 DNAJC5BQ9UF47 199 aa24.51■■□□□ 1.51
FLOT1-203ENST00000416018 UNC13AQ9UPW8 1703 aa24.44■■□□□ 1.5
FLOT1-203ENST00000416018 PABPN1Q86U42 306 aaKnown RBP eCLIP24.3■■□□□ 1.48
FLOT1-203ENST00000416018 BICRAQ9NZM4 1560 aa24.1■■□□□ 1.45
FLOT1-203ENST00000416018 MYO15BQ96JP2 1530 aa24.04■■□□□ 1.44
FLOT1-203ENST00000416018 ZCCHC6Q5VYS8 1495 aaKnown RBP23.95■■□□□ 1.42
FLOT1-203ENST00000416018 SCRIBQ14160 1630 aa23.83■■□□□ 1.41
FLOT1-203ENST00000416018 DCAF1Q9Y4B6 1507 aa23.76■■□□□ 1.39
FLOT1-203ENST00000416018 CC2D2AQ9P2K1 1620 aa23.6■■□□□ 1.37
FLOT1-203ENST00000416018 SHROOM4Q9ULL8 1493 aa23.55■■□□□ 1.36
FLOT1-203ENST00000416018 EIF4G1Q04637 1599 aaKnown RBP23.5■■□□□ 1.35
FLOT1-203ENST00000416018 CECR2Q9BXF3 1484 aa23.48■■□□□ 1.35
FLOT1-203ENST00000416018 SMARCA4P51532 1647 aa22.64■■□□□ 1.21
FLOT1-203ENST00000416018 NCAPD3P42695 1498 aa22.59■■□□□ 1.21
FLOT1-203ENST00000416018 ATAD2BQ9ULI0 1458 aa22.59■■□□□ 1.21
FLOT1-203ENST00000416018 ERCC6Q03468 1493 aa22.53■■□□□ 1.2
FLOT1-203ENST00000416018 SMARCA2P51531 1590 aa22.51■■□□□ 1.19
FLOT1-203ENST00000416018 HMGXB3Q12766 1538 aa22.48■■□□□ 1.19
FLOT1-203ENST00000416018 NESP48681 1621 aa22.46■■□□□ 1.19
FLOT1-203ENST00000416018 BAZ1AQ9NRL2 1556 aaPredicted RBP22.43■■□□□ 1.18
FLOT1-203ENST00000416018 DNAJC5Q9H3Z4 198 aa22.43■■□□□ 1.18
FLOT1-203ENST00000416018 CUX2O14529 1486 aa22.41■■□□□ 1.18
FLOT1-203ENST00000416018 BAZ1BQ9UIG0 1483 aaKnown RBP22.4■■□□□ 1.18
FLOT1-203ENST00000416018 MROH2BQ7Z745 1585 aa22.34■■□□□ 1.17
FLOT1-203ENST00000416018 PEG3Q9GZU2 1588 aa22.29■■□□□ 1.16
FLOT1-203ENST00000416018 KIF21AQ7Z4S6 1674 aa22.25■■□□□ 1.15
FLOT1-203ENST00000416018 THOC2Q8NI27 1593 aaKnown RBP22.23■■□□□ 1.15
FLOT1-203ENST00000416018 LAMC3Q9Y6N6 1575 aa22.17■■□□□ 1.14
FLOT1-203ENST00000416018 WIZO95785 1651 aa22.16■■□□□ 1.14
FLOT1-203ENST00000416018 PDS5BQ9NTI5 1447 aa21.97■■□□□ 1.11
FLOT1-203ENST00000416018 CADPSQ9ULU8 1353 aa21.92■■□□□ 1.1
FLOT1-203ENST00000416018 MRC2Q9UBG0 1479 aa21.87■■□□□ 1.09
FLOT1-203ENST00000416018 WDR62O43379 1518 aa21.83■■□□□ 1.09
FLOT1-203ENST00000416018 CEP164Q9UPV0 1460 aa21.79■■□□□ 1.08
FLOT1-203ENST00000416018 RSF1Q96T23 1441 aaPredicted RBP21.78■■□□□ 1.08
FLOT1-203ENST00000416018 FANCD2Q9BXW9 1451 aa21.76■■□□□ 1.07
FLOT1-203ENST00000416018 TOP2AP11388 1531 aaKnown RBP21.75■■□□□ 1.07
FLOT1-203ENST00000416018 PRDM2Q13029 1718 aa21.68■■□□□ 1.06
FLOT1-203ENST00000416018 CFTRP13569 1480 aa21.67■■□□□ 1.06
FLOT1-203ENST00000416018 URB2Q14146 1524 aaKnown RBP21.62■■□□□ 1.05
FLOT1-203ENST00000416018 TRIM41Q8WV44 630 aa21.61■■□□□ 1.05
FLOT1-203ENST00000416018 CCDC88BA6NC98 1476 aa21.5■■□□□ 1.03
FLOT1-203ENST00000416018 ZNF608Q9ULD9 1512 aaPredicted RBP21.39■■□□□ 1.01
FLOT1-203ENST00000416018 TOPBP1Q92547 1522 aa21.35■■□□□ 1.01
FLOT1-203ENST00000416018 OSCARQ8IYS5 282 aa21.34■■□□□ 1.01
FLOT1-203ENST00000416018 IFT140Q96RY7 1462 aa21.3■■□□□ 1
FLOT1-203ENST00000416018 EIF4G3O43432 1585 aaKnown RBP21.3■■□□□ 1
FLOT1-203ENST00000416018 DNMBPQ6XZF7 1577 aa21.27■■□□□ 1
FLOT1-203ENST00000416018 RIMBP3CA6NJZ7 1639 aa21.27■■□□□ 1
FLOT1-203ENST00000416018 RIMBP3BA6NNM3 1639 aa21.27■■□□□ 1
FLOT1-203ENST00000416018 RIMBP3Q9UFD9 1639 aa21.27■■□□□ 1
FLOT1-203ENST00000416018 CHD1O14646 1710 aa21.24■□□□□ 0.99
FLOT1-203ENST00000416018 TARBP1Q13395 1621 aaKnown RBP21.2■□□□□ 0.98
FLOT1-203ENST00000416018 ABCC8Q09428 1581 aa21.17■□□□□ 0.98
FLOT1-203ENST00000416018 AQRO60306 1485 aaKnown RBP eCLIP21.15■□□□□ 0.983e-13■■■■■ 37
FLOT1-203ENST00000416018 ARHGEF11O15085 1522 aa21.13■□□□□ 0.97
FLOT1-203ENST00000416018 POLA1P09884 1462 aaPredicted RBP21.13■□□□□ 0.97
FLOT1-203ENST00000416018 RAD54L2Q9Y4B4 1467 aa21.1■□□□□ 0.97
FLOT1-203ENST00000416018 FBLN2P98095 1184 aa21.04■□□□□ 0.96
FLOT1-203ENST00000416018 FGD5Q6ZNL6 1462 aa21.01■□□□□ 0.95
FLOT1-203ENST00000416018 CUX1P39880 1505 aa21■□□□□ 0.95
FLOT1-203ENST00000416018 SUPT5HO00267 1087 aaKnown RBP21■□□□□ 0.95
FLOT1-203ENST00000416018 TDRD9Q8NDG6 1382 aaKnown RBP20.99■□□□□ 0.95
FLOT1-203ENST00000416018 SOGA1O94964 1423 aa20.97■□□□□ 0.95
FLOT1-203ENST00000416018 SNAPC4Q5SXM2 1469 aa20.96■□□□□ 0.95
FLOT1-203ENST00000416018 CYB5RLQ6IPT4 315 aa20.95■□□□□ 0.94
FLOT1-203ENST00000416018 WDR97A6NE52 1622 aa20.94■□□□□ 0.94
FLOT1-203ENST00000416018 ARAP1Q96P48 1450 aa20.93■□□□□ 0.94
FLOT1-203ENST00000416018 PBRM1Q86U86 1689 aa20.92■□□□□ 0.94
FLOT1-203ENST00000416018 CLASP1Q7Z460 1538 aa20.83■□□□□ 0.93
FLOT1-203ENST00000416018 SYNJ1O43426 1573 aa20.81■□□□□ 0.92
FLOT1-203ENST00000416018 GRIN2BQ13224 1484 aa20.8■□□□□ 0.92
FLOT1-203ENST00000416018 MAGI1Q96QZ7 1491 aaPredicted RBP20.8■□□□□ 0.92
FLOT1-203ENST00000416018 CHMP7Q8WUX9 453 aaPredicted RBP20.78■□□□□ 0.92
FLOT1-203ENST00000416018 ABCA5Q8WWZ7 1642 aa20.76■□□□□ 0.91
FLOT1-203ENST00000416018 TRHP20396 242 aaPredicted RBP20.76■□□□□ 0.91
FLOT1-203ENST00000416018 GAPVD1Q14C86 1478 aa20.75■□□□□ 0.91
FLOT1-203ENST00000416018 SYNJ2O15056 1496 aa20.75■□□□□ 0.91
FLOT1-203ENST00000416018 ABCA10Q8WWZ4 1543 aa20.69■□□□□ 0.9
FLOT1-203ENST00000416018 BIVM-ERCC5R4GMW8 1640 aa20.66■□□□□ 0.9
FLOT1-203ENST00000416018 ADAMTS12P58397 1594 aa20.63■□□□□ 0.89
FLOT1-203ENST00000416018 ERCC6L2Q5T890 1561 aa20.62■□□□□ 0.89
FLOT1-203ENST00000416018 TOP2BQ02880 1626 aa20.61■□□□□ 0.89
FLOT1-203ENST00000416018 CEP170Q5SW79 1584 aa20.58■□□□□ 0.88
FLOT1-203ENST00000416018 GRIN2AQ12879 1464 aa20.57■□□□□ 0.88
FLOT1-203ENST00000416018 WRNQ14191 1432 aaPredicted RBP eCLIP20.57■□□□□ 0.88
FLOT1-203ENST00000416018 NUP160Q12769 1436 aa20.46■□□□□ 0.87
FLOT1-203ENST00000416018 SHROOM2Q13796 1616 aa20.45■□□□□ 0.86
FLOT1-203ENST00000416018 FHAD1B1AJZ9 1412 aa20.44■□□□□ 0.86
FLOT1-203ENST00000416018 ERICH3Q5RHP9 1530 aa20.43■□□□□ 0.86
FLOT1-203ENST00000416018 KIF13AQ9H1H9 1805 aa20.34■□□□□ 0.85
FLOT1-203ENST00000416018 RUSC2Q8N2Y8 1516 aa20.34■□□□□ 0.85
FLOT1-203ENST00000416018 PRG4Q92954 1404 aaPredicted RBP20.3■□□□□ 0.84
FLOT1-203ENST00000416018 JPH4Q96JJ6 628 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms