RNA–Protein interactions for RNA: ENST00000415824.1

AP001043.1-203, humanhuman

TSL 5 BASIC

Gene AP001043.1, Length 407 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001043.1-203ENST00000415824 NISCHQ9Y2I1 1504 aa19.19■□□□□ 0.66
AP001043.1-203ENST00000415824 ABCC9O60706 1549 aa17.78■□□□□ 0.44
AP001043.1-203ENST00000415824 CCDC180Q9P1Z9 1646 aa17.5■□□□□ 0.39
AP001043.1-203ENST00000415824 DNAJC5BQ9UF47 199 aa17.14■□□□□ 0.33
AP001043.1-203ENST00000415824 RB1CC1Q8TDY2 1594 aa16.82■□□□□ 0.28
AP001043.1-203ENST00000415824 NACADO15069 1562 aa16.62■□□□□ 0.25
AP001043.1-203ENST00000415824 UNC13AQ9UPW8 1703 aa16.48■□□□□ 0.23
AP001043.1-203ENST00000415824 PABPN1Q86U42 306 aaKnown RBP eCLIP16.42■□□□□ 0.22
AP001043.1-203ENST00000415824 BICRAQ9NZM4 1560 aa16.38■□□□□ 0.21
AP001043.1-203ENST00000415824 MYO15BQ96JP2 1530 aa16.34■□□□□ 0.21
AP001043.1-203ENST00000415824 SHROOM4Q9ULL8 1493 aa16.2■□□□□ 0.18
AP001043.1-203ENST00000415824 DCAF8L2P0C7V8 631 aa16.12■□□□□ 0.17
AP001043.1-203ENST00000415824 DNAJC5Q9H3Z4 198 aa16.12■□□□□ 0.17
AP001043.1-203ENST00000415824 CC2D2AQ9P2K1 1620 aa16.12■□□□□ 0.17
AP001043.1-203ENST00000415824 CECR2Q9BXF3 1484 aa16.11■□□□□ 0.17
AP001043.1-203ENST00000415824 EIF4G1Q04637 1599 aaKnown RBP15.99■□□□□ 0.15
AP001043.1-203ENST00000415824 DCAF1Q9Y4B6 1507 aa15.92■□□□□ 0.14
AP001043.1-203ENST00000415824 ZCCHC6Q5VYS8 1495 aaKnown RBP15.82■□□□□ 0.12
AP001043.1-203ENST00000415824 SCRIBQ14160 1630 aa15.76■□□□□ 0.11
AP001043.1-203ENST00000415824 CUX2O14529 1486 aa15.65■□□□□ 0.1
AP001043.1-203ENST00000415824 ERCC6Q03468 1493 aa15.37■□□□□ 0.05
AP001043.1-203ENST00000415824 NCAPD3P42695 1498 aa15.35■□□□□ 0.05
AP001043.1-203ENST00000415824 HMGXB3Q12766 1538 aa15.21■□□□□ 0.03
AP001043.1-203ENST00000415824 ATAD2BQ9ULI0 1458 aa15.2■□□□□ 0.02
AP001043.1-203ENST00000415824 THOC2Q8NI27 1593 aaKnown RBP15.2■□□□□ 0.02
AP001043.1-203ENST00000415824 NESP48681 1621 aa15.16■□□□□ 0.02
AP001043.1-203ENST00000415824 SMARCA2P51531 1590 aa15.14■□□□□ 0.01
AP001043.1-203ENST00000415824 LAMC3Q9Y6N6 1575 aa15.07■□□□□ 0
AP001043.1-203ENST00000415824 SMARCA4P51532 1647 aa15.06■□□□□ 0
AP001043.1-203ENST00000415824 TRIM41Q8WV44 630 aa15.04■□□□□ -0
AP001043.1-203ENST00000415824 PEG3Q9GZU2 1588 aa15.02□□□□□ -0.01
AP001043.1-203ENST00000415824 KIF21AQ7Z4S6 1674 aa15□□□□□ -0.01
AP001043.1-203ENST00000415824 BAZ1BQ9UIG0 1483 aaKnown RBP14.98□□□□□ -0.01
AP001043.1-203ENST00000415824 PDS5BQ9NTI5 1447 aa14.95□□□□□ -0.02
AP001043.1-203ENST00000415824 BAZ1AQ9NRL2 1556 aaPredicted RBP14.93□□□□□ -0.02
AP001043.1-203ENST00000415824 WDR62O43379 1518 aa14.89□□□□□ -0.03
AP001043.1-203ENST00000415824 MRC2Q9UBG0 1479 aa14.85□□□□□ -0.03
AP001043.1-203ENST00000415824 CADPSQ9ULU8 1353 aa14.81□□□□□ -0.04
AP001043.1-203ENST00000415824 MROH2BQ7Z745 1585 aa14.74□□□□□ -0.05
AP001043.1-203ENST00000415824 OSCARQ8IYS5 282 aa14.74□□□□□ -0.05
AP001043.1-203ENST00000415824 CEP164Q9UPV0 1460 aa14.68□□□□□ -0.06
AP001043.1-203ENST00000415824 RIMBP3CA6NJZ7 1639 aa14.66□□□□□ -0.06
AP001043.1-203ENST00000415824 RIMBP3BA6NNM3 1639 aa14.66□□□□□ -0.06
AP001043.1-203ENST00000415824 RIMBP3Q9UFD9 1639 aa14.66□□□□□ -0.06
AP001043.1-203ENST00000415824 FANCD2Q9BXW9 1451 aa14.63□□□□□ -0.07
AP001043.1-203ENST00000415824 CFTRP13569 1480 aa14.57□□□□□ -0.08
AP001043.1-203ENST00000415824 ARHGEF11O15085 1522 aa14.56□□□□□ -0.08
AP001043.1-203ENST00000415824 URB2Q14146 1524 aaKnown RBP14.55□□□□□ -0.08
AP001043.1-203ENST00000415824 WIZO95785 1651 aa14.52□□□□□ -0.08
AP001043.1-203ENST00000415824 IFT140Q96RY7 1462 aa14.44□□□□□ -0.1
AP001043.1-203ENST00000415824 PRDM2Q13029 1718 aa14.44□□□□□ -0.1
AP001043.1-203ENST00000415824 ZNF608Q9ULD9 1512 aaPredicted RBP14.42□□□□□ -0.1
AP001043.1-203ENST00000415824 ARAP1Q96P48 1450 aa14.39□□□□□ -0.11
AP001043.1-203ENST00000415824 CYB5RLQ6IPT4 315 aa14.37□□□□□ -0.11
AP001043.1-203ENST00000415824 RSF1Q96T23 1441 aaPredicted RBP14.36□□□□□ -0.11
AP001043.1-203ENST00000415824 TOP2AP11388 1531 aaKnown RBP14.36□□□□□ -0.11
AP001043.1-203ENST00000415824 EIF4G3O43432 1585 aaKnown RBP14.35□□□□□ -0.11
AP001043.1-203ENST00000415824 CHD1O14646 1710 aa14.32□□□□□ -0.12
AP001043.1-203ENST00000415824 TOPBP1Q92547 1522 aa14.31□□□□□ -0.12
AP001043.1-203ENST00000415824 TRHP20396 242 aaPredicted RBP14.3□□□□□ -0.12
AP001043.1-203ENST00000415824 ABCC8Q09428 1581 aa14.29□□□□□ -0.12
AP001043.1-203ENST00000415824 TARBP1Q13395 1621 aaKnown RBP14.27□□□□□ -0.12
AP001043.1-203ENST00000415824 AEBP2Q6ZN18 517 aaPredicted RBP14.24□□□□□ -0.13
AP001043.1-203ENST00000415824 DNMBPQ6XZF7 1577 aa14.23□□□□□ -0.13
AP001043.1-203ENST00000415824 CLASP1Q7Z460 1538 aa14.2□□□□□ -0.14
AP001043.1-203ENST00000415824 AQRO60306 1485 aaKnown RBP eCLIP14.2□□□□□ -0.14
AP001043.1-203ENST00000415824 CCDC88BA6NC98 1476 aa14.16□□□□□ -0.14
AP001043.1-203ENST00000415824 WDR97A6NE52 1622 aa14.15□□□□□ -0.14
AP001043.1-203ENST00000415824 POLA1P09884 1462 aaPredicted RBP14.13□□□□□ -0.15
AP001043.1-203ENST00000415824 SYNJ1O43426 1573 aa14.1□□□□□ -0.15
AP001043.1-203ENST00000415824 FBLN2P98095 1184 aa14.08□□□□□ -0.16
AP001043.1-203ENST00000415824 MAGI1Q96QZ7 1491 aaPredicted RBP14.07□□□□□ -0.16
AP001043.1-203ENST00000415824 SNAPC4Q5SXM2 1469 aa14.06□□□□□ -0.16
AP001043.1-203ENST00000415824 RAD54L2Q9Y4B4 1467 aa14.03□□□□□ -0.16
AP001043.1-203ENST00000415824 GAPVD1Q14C86 1478 aa14.02□□□□□ -0.16
AP001043.1-203ENST00000415824 SOGA1O94964 1423 aa14.02□□□□□ -0.16
AP001043.1-203ENST00000415824 TDRD9Q8NDG6 1382 aaKnown RBP14.02□□□□□ -0.17
AP001043.1-203ENST00000415824 SYNJ2O15056 1496 aa14.01□□□□□ -0.17
AP001043.1-203ENST00000415824 GRIN2BQ13224 1484 aa13.99□□□□□ -0.17
AP001043.1-203ENST00000415824 CHMP7Q8WUX9 453 aaPredicted RBP13.97□□□□□ -0.17
AP001043.1-203ENST00000415824 FGD5Q6ZNL6 1462 aa13.94□□□□□ -0.18
AP001043.1-203ENST00000415824 PBRM1Q86U86 1689 aa13.91□□□□□ -0.18
AP001043.1-203ENST00000415824 KIF13AQ9H1H9 1805 aa13.91□□□□□ -0.18
AP001043.1-203ENST00000415824 CUX1P39880 1505 aa13.89□□□□□ -0.19
AP001043.1-203ENST00000415824 ERCC6L2Q5T890 1561 aa13.88□□□□□ -0.19
AP001043.1-203ENST00000415824 ABCA5Q8WWZ7 1642 aa13.86□□□□□ -0.19
AP001043.1-203ENST00000415824 SHROOM2Q13796 1616 aa13.85□□□□□ -0.19
AP001043.1-203ENST00000415824 ABCA10Q8WWZ4 1543 aa13.83□□□□□ -0.2
AP001043.1-203ENST00000415824 CEP170Q5SW79 1584 aa13.83□□□□□ -0.2
AP001043.1-203ENST00000415824 NUP160Q12769 1436 aa13.82□□□□□ -0.2
AP001043.1-203ENST00000415824 GRIN2AQ12879 1464 aa13.81□□□□□ -0.2
AP001043.1-203ENST00000415824 ADAMTS12P58397 1594 aa13.77□□□□□ -0.21
AP001043.1-203ENST00000415824 ILDR1Q86SU0 546 aaPredicted RBP13.76□□□□□ -0.21
AP001043.1-203ENST00000415824 ABCC10Q5T3U5 1492 aa13.74□□□□□ -0.21
AP001043.1-203ENST00000415824 KDM4FA0A1W2PPD8 638 aa13.73□□□□□ -0.21
AP001043.1-203ENST00000415824 MAPKBP1O60336 1514 aa13.73□□□□□ -0.21
AP001043.1-203ENST00000415824 DIP2BQ9P265 1576 aa13.71□□□□□ -0.22
AP001043.1-203ENST00000415824 FHAD1B1AJZ9 1412 aa13.68□□□□□ -0.22
AP001043.1-203ENST00000415824 KDM6BO15054 1643 aa13.67□□□□□ -0.22
AP001043.1-203ENST00000415824 ERICH3Q5RHP9 1530 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms